RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 SULT1B1O43704 296 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 YPEL1O60688 119 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 GPX5O75715 221 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 CDK2AP2O75956 126 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 CA2P00918 260 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 APOA2P02652 100 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 GLAP06280 429 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 CD2P06729 351 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 HTR1AP08908 422 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 GTF2F2P13984 249 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 PRDX6P30041 224 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 CAPGP40121 348 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 CRISP1P54107 249 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 MFAP2P55001 183 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 HTD2P86397 168 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 TMED1Q13445 227 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 PSG5Q15238 335 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 ZSCAN26Q16670 478 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 LY6G6FQ5SQ64 297 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 NXNL2Q5VZ03 156 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 FAM131AQ6UXB0 335 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 ZNF497Q6ZNH5 498 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 SLC25A42Q86VD7 318 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 POM121L12Q8N7R1 296 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 ZNF439Q8NDP4 499 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 OR51A2Q8NGJ7 313 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 OR2G2Q8NGZ5 317 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 UBALD1Q8TB05 177 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 GALNT14Q96FL9 552 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 YPEL2Q96QA6 119 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 TBX5Q99593 518 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 MRPL20Q9BYC9 149 aaKnown RBP4.27□□□□□ -1.73
USP49-205ENST00000448078 TAF9BQ9HBM6 251 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 ZC4H2Q9NQZ6 224 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 JPT1Q9UK76 154 aa4.27□□□□□ -1.73
USP49-205ENST00000448078 A0A1B0GVY2 172 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 A0A1W2PQL4 384 aaPredicted RBP4.26□□□□□ -1.73
USP49-205ENST00000448078 DAPL1A0PJW8 107 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 MSGN1A6NI15 193 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 C2orf70A6NJV1 201 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 C16orf90A8MZG2 172 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 LGALS9O00182 355 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 SLC31A2O15432 143 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 CREBL2O60519 120 aaPredicted RBP4.26□□□□□ -1.73
USP49-205ENST00000448078 DHFRP00374 187 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 MAS1P04201 325 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 OR9G9P0C7N8 305 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 GABRB1P18505 474 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 NPY1RP25929 384 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 ALDH3A2P51648 485 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 PPP3R1P63098 170 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 MRPL28Q13084 256 aaKnown RBP4.26□□□□□ -1.73
USP49-205ENST00000448078 RIPK1Q13546 671 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 TPBGQ13641 420 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 PTGES3Q15185 160 aaKnown RBP4.26□□□□□ -1.73
USP49-205ENST00000448078 LGALS9BQ3B8N2 356 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 PIGYQ3MUY2 71 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 C14orf177Q52M58 125 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 NHLRC3Q5JS37 347 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 TMEM236Q5W0B7 351 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 ZNF833PQ6ZTB9 187 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 TMEM179BQ7Z7N9 219 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 GPHB5Q86YW7 130 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 PRSS35Q8N3Z0 413 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 UXS1Q8NBZ7 420 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 NECAP1Q8NC96 275 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 OR4K15Q8NH41 348 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 OR1L1Q8NH94 360 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 GFI1Q99684 422 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 LITAFQ99732 161 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 SPIN2AQ99865 258 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 SPIN2BQ9BPZ2 258 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 ADGRL4Q9HBW9 690 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 GHRLQ9UBU3 117 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 ZNF221Q9UK13 617 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 RPL36Q9Y3U8 105 aaKnown RBP4.26□□□□□ -1.73
USP49-205ENST00000448078 GMPPBQ9Y5P6 360 aa4.26□□□□□ -1.73
USP49-205ENST00000448078 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.25□□□□□ -1.73
USP49-205ENST00000448078 TRAV10A0A0B4J240 114 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 CCDC182A6NF36 153 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 OR4C46A6NHA9 309 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 PRR32B1ATL7 298 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 M0R2N4 97 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 GEMIN2O14893 280 aaKnown RBP4.25□□□□□ -1.73
USP49-205ENST00000448078 SNX3O60493 162 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 OR2C1O95371 312 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 FUT3P21217 361 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 ZNF93P35789 620 aaPredicted RBP4.25□□□□□ -1.73
USP49-205ENST00000448078 OR3A3P47888 321 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 RBM11P57052 281 aaKnown RBP4.25□□□□□ -1.73
USP49-205ENST00000448078 SNRPGP62308 76 aaKnown RBP4.25□□□□□ -1.73
USP49-205ENST00000448078 RHOGP84095 191 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 NDPQ00604 133 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 GAGE2BQ13066 116 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 EXOSC2Q13868 293 aaKnown RBP4.25□□□□□ -1.73
USP49-205ENST00000448078 KIAA1644Q3SXP7 199 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 ZFP69Q49AA0 526 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 GAGE2EQ4V326 116 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 C1orf134Q5TEV5 83 aa4.25□□□□□ -1.73
USP49-205ENST00000448078 PVRIGQ6DKI7 326 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms