RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 ZIC4Q8N9L1 334 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 PARLQ9H300 379 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 WFDC1Q9HC57 220 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 ZNRD1Q9P1U0 126 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 PPIFP30405 207 aaKnown RBP6.73□□□□□ -1.33
RIF1-205ENST00000444746 EMP1P54849 157 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 C10orf55Q5SWW7 151 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 WBP1Q96G27 269 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 RPRMQ9NS64 109 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 TUBGCP6Q96RT7 1819 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 IGHV1-18A0A0C4DH31 117 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 CBLN1P23435 193 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 ICAM4Q14773 271 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 MBNL2Q5VZF2 373 aaKnown RBP6.73□□□□□ -1.33
RIF1-205ENST00000444746 CENPVQ7Z7K6 275 aaPredicted RBP6.73□□□□□ -1.33
RIF1-205ENST00000444746 H1FOOQ8IZA3 346 aaPredicted RBP6.73□□□□□ -1.33
RIF1-205ENST00000444746 MYO16Q9Y6X6 1858 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 SRIP30626 198 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 CCL20P78556 96 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 ZNF273Q14593 569 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 RNF222A6NCQ9 220 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 CA11O75493 328 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 TRGC1P0CF51 173 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 HOXA6P31267 233 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 HGFACQ04756 655 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 KLRB1Q12918 225 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 JPT1Q9UK76 154 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 F5P12259 2224 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 PARP14Q460N5 1801 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 CX3CL1P78423 397 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 ELOBQ15370 118 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 NHLRC3Q5JS37 347 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 WDR73Q6P4I2 378 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 C18orf15Q96N68 181 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 PIMREGQ9BSJ6 248 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 SOD3P08294 240 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 PMCHL2Q9BQD1 86 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 CLEC7AQ9BXN2 247 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 TCF21O43680 179 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 EFEMP2O95967 443 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 HIST1H1AQ02539 215 aaPredicted RBP6.72□□□□□ -1.33
RIF1-205ENST00000444746 PNRC1Q12796 327 aaPredicted RBP6.72□□□□□ -1.33
RIF1-205ENST00000444746 CASP8AP2Q9UKL3 1982 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 IGKV1-27A0A075B6S5 117 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 TRAV5A0A0B4J249 113 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 RNASE1P07998 156 aaKnown RBP6.72□□□□□ -1.33
RIF1-205ENST00000444746 GCHFRP30047 84 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 PRR30Q53SZ7 412 aaPredicted RBP6.72□□□□□ -1.33
RIF1-205ENST00000444746 IGFL4Q6B9Z1 124 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 OR10W1Q8NGF6 305 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 OR9G1Q8NH87 305 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 AQP10Q96PS8 301 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 E9PLN8 166 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 GPR183P32249 361 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 KIR2DL2P43627 348 aaPredicted RBP6.72□□□□□ -1.33
RIF1-205ENST00000444746 ATP5G2Q06055 141 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 TMEM78Q5T7P6 136 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 HS3ST6Q96QI5 342 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 DNAJC4Q9NNZ3 241 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 C1QTNF9BB2RNN3 333 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 H0YIZ8 118 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 MEF2BQ02080 365 aaPredicted RBP6.72□□□□□ -1.33
RIF1-205ENST00000444746 SRSF9Q13242 221 aaKnown RBP eCLIP6.72□□□□□ -1.33
RIF1-205ENST00000444746 C2orf83Q53S99 150 aa6.72□□□□□ -1.33
RIF1-205ENST00000444746 FAM53AQ6NSI3 398 aaPredicted RBP6.72□□□□□ -1.33
RIF1-205ENST00000444746 CORTO00230 105 aa6.71□□□□□ -1.33
RIF1-205ENST00000444746 LINC00271P0C7V0 271 aa6.71□□□□□ -1.33
RIF1-205ENST00000444746 HIST1H1EP10412 219 aaKnown RBP6.71□□□□□ -1.33
RIF1-205ENST00000444746 HIST1H2BAQ96A08 127 aa6.71□□□□□ -1.33
RIF1-205ENST00000444746 WNT10AQ9GZT5 417 aa6.71□□□□□ -1.33
RIF1-205ENST00000444746 TRGV3P03979 118 aa6.71□□□□□ -1.33
RIF1-205ENST00000444746 IGFBP3P17936 291 aaPredicted RBP6.71□□□□□ -1.33
RIF1-205ENST00000444746 GCSHP23434 173 aa6.71□□□□□ -1.33
RIF1-205ENST00000444746 PTGDSP41222 190 aa6.71□□□□□ -1.33
RIF1-205ENST00000444746 RELQ04864 619 aaPredicted RBP6.71□□□□□ -1.33
RIF1-205ENST00000444746 OR4A47Q6IF82 309 aa6.71□□□□□ -1.33
RIF1-205ENST00000444746 BIVMQ86UB2 503 aa6.71□□□□□ -1.33
RIF1-205ENST00000444746 RPRMLQ8N4K4 120 aa6.71□□□□□ -1.33
RIF1-205ENST00000444746 SFXN3Q9BWM7 321 aa6.71□□□□□ -1.33
RIF1-205ENST00000444746 B4DEV8 164 aa6.71□□□□□ -1.34
RIF1-205ENST00000444746 GGCTO75223 188 aaKnown RBP6.71□□□□□ -1.34
RIF1-205ENST00000444746 SPATA45Q537H7 98 aa6.71□□□□□ -1.34
RIF1-205ENST00000444746 FAM162BQ5T6X4 162 aa6.71□□□□□ -1.34
RIF1-205ENST00000444746 MAPK1IP1LQ8NDC0 245 aa6.71□□□□□ -1.34
RIF1-205ENST00000444746 IGFBPL1Q8WX77 278 aa6.71□□□□□ -1.34
RIF1-205ENST00000444746 ZNFX1Q9P2E3 1918 aaKnown RBP6.71□□□□□ -1.34
RIF1-205ENST00000444746 ZNF236Q9UL36 1845 aa6.71□□□□□ -1.34
RIF1-205ENST00000444746 SAA2-SAA4A0A096LPE2 208 aa6.71□□□□□ -1.34
RIF1-205ENST00000444746 C7orf71A4D174 169 aa6.71□□□□□ -1.34
RIF1-205ENST00000444746 ZNF324O75467 553 aaPredicted RBP6.71□□□□□ -1.34
RIF1-205ENST00000444746 TGFAP01135 160 aa6.71□□□□□ -1.34
RIF1-205ENST00000444746 OR9G9P0C7N8 305 aa6.71□□□□□ -1.34
RIF1-205ENST00000444746 SAA2P0DJI9 122 aaPredicted RBP6.71□□□□□ -1.34
RIF1-205ENST00000444746 APOBEC3AP31941 199 aaPredicted RBP6.71□□□□□ -1.34
RIF1-205ENST00000444746 PLAURQ03405 335 aa6.71□□□□□ -1.34
RIF1-205ENST00000444746 GFI1BQ5VTD9 330 aa6.71□□□□□ -1.34
RIF1-205ENST00000444746 OR10J6PQ8NGY7 276 aa6.71□□□□□ -1.34
RIF1-205ENST00000444746 TMEM191AQ9H0A3 160 aa6.71□□□□□ -1.34
RIF1-205ENST00000444746 SEMA5BQ9P283 1151 aa6.71□□□□□ -1.34
RIF1-205ENST00000444746 TRAV24A0A0B4J272 114 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms