RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 DBX1A6NMT0 343 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 HPRT1P00492 218 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 ELANEP08246 267 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 OR9G9P0C7N8 305 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 P0C879 139 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 APELAP0DMC3 54 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 PTBP1P26599 531 aaKnown RBP eCLIP9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 LPAR6P43657 344 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 CATR1Q13166 79 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 TNXAQ16473 311 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 DEFB136Q30KP8 78 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 SCGB2B2Q4G0G5 96 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 PYDC2Q56P42 97 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 TEX38Q6PEX7 206 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 UNQ5815/PRO19632Q6UWF5 114 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 Q8N402 240 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 COMMD1Q8N668 190 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 ZNF491Q8N8L2 437 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 PLEKHA2Q9HB19 425 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 HRASLSQ9HDD0 168 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 BET1LQ9NYM9 111 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 COMMD9Q9P000 198 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 GPR132Q9UNW8 380 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 VSIG4Q9Y279 399 aa9.98□□□□□ -0.81
PDLIM2-212ENST00000443561 HMX3A6NHT5 357 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 UPK2O00526 184 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 MPPED1O15442 326 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 OR2A4O95047 310 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 OPN1MWP04001 364 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 IFNA6P05013 189 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 CTSDP07339 412 aaPredicted RBP9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 OPN1MW2P0DN77 364 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 OPN1MW3P0DN78 364 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 PGAM2P15259 253 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 S100A5P33763 92 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 PIGPP57054 158 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 TAS2R31P59538 309 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 SLC35B1P78383 322 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 ZNF45Q02386 682 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 CBX3Q13185 183 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 MEF2DQ14814 521 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 IZUMO4Q1ZYL8 232 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 AKIRIN2Q53H80 203 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 KHDC1LQ5JSQ8 128 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 LHFPL5Q8TAF8 219 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 R3HDM4Q96D70 268 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 RAX2Q96IS3 184 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 SEC22AQ96IW7 307 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 OR2A7Q96R45 310 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 P2RX4Q99571 388 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 ALX4Q9H161 411 aaPredicted RBP9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 TMEM140Q9NV12 185 aa9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 FOXA2Q9Y261 457 aaPredicted RBP9.97□□□□□ -0.81
PDLIM2-212ENST00000443561 NOTCH1P46531 2555 aa9.96□□□□□ -0.81
PDLIM2-212ENST00000443561 MEGF8Q7Z7M0 2845 aa9.96□□□□□ -0.81
PDLIM2-212ENST00000443561 A0A0G2JRQ6 117 aa9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 MSGN1A6NI15 193 aa9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 MARCH11A6NNE9 402 aa9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 I3L521 148 aa9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 IGKV1-5P01602 117 aa9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 NQO2P16083 231 aa9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 BTCP35070 178 aa9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 G6PCP35575 357 aa9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 CDX1P47902 265 aaPredicted RBP9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 RAB9AP51151 201 aa9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 CXorf66Q5JRM2 361 aaPredicted RBP9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 MMD2Q8IY49 270 aa9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 LINC00482Q8N8I6 264 aa9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 ADAD2Q8NCV1 583 aaKnown RBP9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 KLHL30-AS1Q8NEE0 82 aa9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 ABHD5Q8WTS1 349 aa9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 ZNF486Q96H40 463 aaPredicted RBP9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 FAM212BQ9NTI7 297 aaPredicted RBP9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 NOTCH3Q9UM47 2321 aa9.96□□□□□ -0.82
PDLIM2-212ENST00000443561 H0Y980 276 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 HRASP01112 189 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 PF4V1P10720 104 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 AREGP15514 252 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 OR2B8PP59922 312 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 SUPT4H1P63272 117 aaKnown RBP9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 FHL3Q13643 280 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 SP6Q3SY56 376 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 LPCAT3Q6P1A2 487 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 ZNF695Q8IW36 515 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 CMTM1Q8IZ96 169 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 TCTEX1D1Q8N7M0 179 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 OR5T1Q8NG75 326 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 BORCS5Q969J3 196 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 ZFP57Q9NU63 452 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 PRR13Q9NZ81 148 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 NSG2Q9Y328 171 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 DMRT1Q9Y5R6 373 aa9.95□□□□□ -0.82
PDLIM2-212ENST00000443561 IGLC7A0M8Q6 106 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 DISC1C4P0D8 188 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 CNIH1O95406 144 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 KRASP01116 189 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 PRH1P02810 166 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 HLA-GP17693 338 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 UCP1P25874 307 aa9.94□□□□□ -0.82
PDLIM2-212ENST00000443561 RPL27AP46776 148 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms