RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PRRT1Q99946 306 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 FAM103A1Q9BTL3 118 aaKnown RBP9.24□□□□□ -0.93
HSPG2-206ENST00000439717 ZNF430Q9H8G1 570 aaPredicted RBP9.24□□□□□ -0.93
HSPG2-206ENST00000439717 SLC2A9Q9NRM0 540 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 BET1LQ9NYM9 111 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 PKD1L1Q8TDX9 2849 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 A0A1W2PN81 502 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 NUDT19A8MXV4 375 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 H3BUA1 57 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 MPPED1O15442 326 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 FGF2P09038 288 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 CHRNA7P36544 502 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 RAB9AP51151 201 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 AP3S2P59780 193 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 SURF2Q15527 256 aaPredicted RBP9.23□□□□□ -0.93
HSPG2-206ENST00000439717 ZNF79Q15937 498 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 TNXAQ16473 311 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 OR4A47Q6IF82 309 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 TBC1D26Q86UD7 250 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 ZNF695Q8IW36 515 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 Q8N402 240 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 DEDD2Q8WXF8 326 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 UBE2E2Q96LR5 201 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 SLC2A8Q9NY64 477 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 VWFP04275 2813 aa9.23□□□□□ -0.93
HSPG2-206ENST00000439717 FBN3Q75N90 2809 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 MSGN1A6NI15 193 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 SOX15O60248 233 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 S1PR2O95136 353 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 BRI3O95415 125 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 IL6RP08887 468 aaPredicted RBP9.22□□□□□ -0.93
HSPG2-206ENST00000439717 FAUP35544 74 aaKnown RBP9.22□□□□□ -0.93
HSPG2-206ENST00000439717 LPAR6P43657 344 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 PPP5CP53041 499 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 PIGPP57054 158 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 ERVK-16P61578 105 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 ZNF585BQ52M93 769 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 FAAP20Q6NZ36 180 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 SSX9Q7RTT3 188 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 ZNF491Q8N8L2 437 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 CCDC71LQ8N9Z2 235 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 KLHL30-AS1Q8NEE0 82 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 DMBX1Q8NFW5 382 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 SRSF12Q8WXF0 261 aaKnown RBP9.22□□□□□ -0.93
HSPG2-206ENST00000439717 TRIM63Q969Q1 353 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 PHB2Q99623 299 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 SPIN2AQ99865 258 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 SPIN2BQ9BPZ2 258 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 KLK15Q9H2R5 256 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 SLA2Q9H6Q3 261 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 HRASLSQ9HDD0 168 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 SCP2D1Q9UJQ7 156 aa9.22□□□□□ -0.93
HSPG2-206ENST00000439717 A6NHS1 94 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 UPK2O00526 184 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 B3GALNT1O75752 331 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 PF4P02776 101 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 CTSDP07339 412 aaPredicted RBP9.21□□□□□ -0.94
HSPG2-206ENST00000439717 HLA-GP17693 338 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 RPL8P62917 257 aaKnown RBP9.21□□□□□ -0.94
HSPG2-206ENST00000439717 KLF9Q13886 244 aaPredicted RBP9.21□□□□□ -0.94
HSPG2-206ENST00000439717 KIAA0141Q14154 515 aaPredicted RBP9.21□□□□□ -0.94
HSPG2-206ENST00000439717 ASPHD1Q5U4P2 390 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 LCNL1Q6ZST4 164 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 C8orf86Q6ZUL3 223 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 TOMM5Q8N4H5 51 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 GDPD1Q8N9F7 314 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 WFDC9Q8NEX5 89 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 OR51S1Q8NGJ8 323 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 OR13C8Q8NGS7 320 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 MARCH1Q8TCQ1 289 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 C4orf3Q8WVX3 66 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 MRGPRFQ96AM1 343 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 SCGB3A2Q96PL1 93 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 SRRQ9GZT4 340 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 TMEM140Q9NV12 185 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 COPZ2Q9P299 210 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 C14orf166Q9Y224 244 aaKnown RBP9.21□□□□□ -0.94
HSPG2-206ENST00000439717 VSIG4Q9Y279 399 aa9.21□□□□□ -0.94
HSPG2-206ENST00000439717 MARCH11A6NNE9 402 aa9.2□□□□□ -0.94
HSPG2-206ENST00000439717 H0Y980 276 aa9.2□□□□□ -0.94
HSPG2-206ENST00000439717 SERPINE2P07093 398 aa9.2□□□□□ -0.94
HSPG2-206ENST00000439717 RPA2P15927 270 aa9.2□□□□□ -0.94
HSPG2-206ENST00000439717 PI3P19957 117 aa9.2□□□□□ -0.94
HSPG2-206ENST00000439717 MYCNOSP40205 109 aa9.2□□□□□ -0.94
HSPG2-206ENST00000439717 RPL27AP46776 148 aaKnown RBP9.2□□□□□ -0.94
HSPG2-206ENST00000439717 RUNX1Q01196 453 aa9.2□□□□□ -0.94
HSPG2-206ENST00000439717 LINC00299Q6ZSB3 139 aa9.2□□□□□ -0.94
HSPG2-206ENST00000439717 C18orf65Q6ZTR6 163 aa9.2□□□□□ -0.94
HSPG2-206ENST00000439717 SLC25A42Q86VD7 318 aa9.2□□□□□ -0.94
HSPG2-206ENST00000439717 OR5T1Q8NG75 326 aa9.2□□□□□ -0.94
HSPG2-206ENST00000439717 MCUBQ9NWR8 336 aa9.2□□□□□ -0.94
HSPG2-206ENST00000439717 C3orf85A0A1B0GTC6 90 aa9.19□□□□□ -0.94
HSPG2-206ENST00000439717 CCL24O00175 119 aa9.19□□□□□ -0.94
HSPG2-206ENST00000439717 KRASP01116 189 aa9.19□□□□□ -0.94
HSPG2-206ENST00000439717 OR9G9P0C7N8 305 aa9.19□□□□□ -0.94
HSPG2-206ENST00000439717 TPPP2P59282 170 aa9.19□□□□□ -0.94
HSPG2-206ENST00000439717 ZNF45Q02386 682 aa9.19□□□□□ -0.94
HSPG2-206ENST00000439717 C10orf55Q5SWW7 151 aa9.19□□□□□ -0.94
HSPG2-206ENST00000439717 ETV3LQ6ZN32 361 aa9.19□□□□□ -0.94
HSPG2-206ENST00000439717 TTC9CQ8N5M4 171 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms