RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 SGMS2Q8NHU3 365 aa13.28□□□□□ -0.28
TARDBP-203ENST00000439080 TP53RKQ96S44 253 aa13.28□□□□□ -0.28
TARDBP-203ENST00000439080 CITED2Q99967 270 aaPredicted RBP13.28□□□□□ -0.28
TARDBP-203ENST00000439080 AIFM2Q9BRQ8 373 aa13.28□□□□□ -0.28
TARDBP-203ENST00000439080 RTBDNQ9BSG5 229 aaPredicted RBP13.28□□□□□ -0.28
TARDBP-203ENST00000439080 CCDC32Q9BV29 185 aa13.28□□□□□ -0.28
TARDBP-203ENST00000439080 FAM212BQ9NTI7 297 aaPredicted RBP13.28□□□□□ -0.28
TARDBP-203ENST00000439080 TMEM140Q9NV12 185 aa13.28□□□□□ -0.28
TARDBP-203ENST00000439080 GPR132Q9UNW8 380 aa13.28□□□□□ -0.28
TARDBP-203ENST00000439080 VWFP04275 2813 aa13.27□□□□□ -0.28
TARDBP-203ENST00000439080 C3orf85A0A1B0GTC6 90 aa13.27□□□□□ -0.29
TARDBP-203ENST00000439080 LINC00854A0A1B0GVQ3 168 aa13.27□□□□□ -0.29
TARDBP-203ENST00000439080 MARCH11A6NNE9 402 aa13.27□□□□□ -0.29
TARDBP-203ENST00000439080 EGR2P11161 476 aaPredicted RBP13.27□□□□□ -0.29
TARDBP-203ENST00000439080 KHDC1LQ5JSQ8 128 aa13.27□□□□□ -0.29
TARDBP-203ENST00000439080 MMD2Q8IY49 270 aa13.27□□□□□ -0.29
TARDBP-203ENST00000439080 TMEM167AQ8TBQ9 72 aa13.27□□□□□ -0.29
TARDBP-203ENST00000439080 WDR12Q9GZL7 423 aaKnown RBP13.27□□□□□ -0.29
TARDBP-203ENST00000439080 BET1LQ9NYM9 111 aa13.27□□□□□ -0.29
TARDBP-203ENST00000439080 ACTL6BO94805 426 aa13.26□□□□□ -0.29
TARDBP-203ENST00000439080 RPA2P15927 270 aa13.26□□□□□ -0.29
TARDBP-203ENST00000439080 G6PCP35575 357 aa13.26□□□□□ -0.29
TARDBP-203ENST00000439080 C19orf54Q5BKX5 351 aa13.26□□□□□ -0.29
TARDBP-203ENST00000439080 C10orf55Q5SWW7 151 aa13.26□□□□□ -0.29
TARDBP-203ENST00000439080 TEX38Q6PEX7 206 aa13.26□□□□□ -0.29
TARDBP-203ENST00000439080 COMMD1Q8N668 190 aa13.26□□□□□ -0.29
TARDBP-203ENST00000439080 OR4A5Q8NH83 315 aa13.26□□□□□ -0.29
TARDBP-203ENST00000439080 SRSF12Q8WXF0 261 aaKnown RBP13.26□□□□□ -0.29
TARDBP-203ENST00000439080 SCGB3A2Q96PL1 93 aa13.26□□□□□ -0.29
TARDBP-203ENST00000439080 NAA60Q9H7X0 242 aa13.26□□□□□ -0.29
TARDBP-203ENST00000439080 CMYA5Q8N3K9 4069 aa13.26□□□□□ -0.29
TARDBP-203ENST00000439080 A0A1W2PN81 502 aa13.25□□□□□ -0.29
TARDBP-203ENST00000439080 NAP1L6A6NFF2 107 aa13.25□□□□□ -0.29
TARDBP-203ENST00000439080 CRYM-AS1A6NIL9 109 aa13.25□□□□□ -0.29
TARDBP-203ENST00000439080 KRASP01116 189 aa13.25□□□□□ -0.29
TARDBP-203ENST00000439080 SERPINE2P07093 398 aa13.25□□□□□ -0.29
TARDBP-203ENST00000439080 PPIFP30405 207 aaKnown RBP13.25□□□□□ -0.29
TARDBP-203ENST00000439080 CHRNA7P36544 502 aa13.25□□□□□ -0.29
TARDBP-203ENST00000439080 CD83Q01151 205 aa13.25□□□□□ -0.29
TARDBP-203ENST00000439080 UNQ5815/PRO19632Q6UWF5 114 aa13.25□□□□□ -0.29
TARDBP-203ENST00000439080 ADAD2Q8NCV1 583 aaKnown RBP13.25□□□□□ -0.29
TARDBP-203ENST00000439080 LFNGQ8NES3 379 aa13.25□□□□□ -0.29
TARDBP-203ENST00000439080 TMEM230Q96A57 120 aa13.25□□□□□ -0.29
TARDBP-203ENST00000439080 PHB2Q99623 299 aa13.25□□□□□ -0.29
TARDBP-203ENST00000439080 TEX13DA0A0J9YY54 714 aaPredicted RBP13.24□□□□□ -0.29
TARDBP-203ENST00000439080 TCRBV4S1A1TA0A5B7 111 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 CENPXA8MT69 81 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 IGKV1-39P01597 117 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 IGHG4P01861 327 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 IGKV1D-39P04432 117 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 OR5AC1P0C628 307 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 CD40LGP29965 261 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 BTCP35070 178 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 CCR6P51684 374 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 RPL8P62917 257 aaKnown RBP13.24□□□□□ -0.29
TARDBP-203ENST00000439080 TMEM267Q0VDI3 215 aaPredicted RBP13.24□□□□□ -0.29
TARDBP-203ENST00000439080 FOXE3Q13461 319 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 ZNF846Q147U1 533 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 RBMS2Q15434 407 aaKnown RBP13.24□□□□□ -0.29
TARDBP-203ENST00000439080 C2orf68Q2NKX9 166 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 NSUN5P1Q3KNT7 163 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 SP6Q3SY56 376 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 LCNL1Q6ZST4 164 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 TMED4Q7Z7H5 227 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 NDUFA11Q86Y39 141 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 MINDY2Q8NBR6 621 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 PKD1L1Q8TDX9 2849 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 SLC25A21Q9BQT8 299 aaPredicted RBP13.24□□□□□ -0.29
TARDBP-203ENST00000439080 C7orf50Q9BRJ6 194 aaKnown RBP13.24□□□□□ -0.29
TARDBP-203ENST00000439080 FOXA2Q9Y261 457 aaPredicted RBP13.24□□□□□ -0.29
TARDBP-203ENST00000439080 NUBP2Q9Y5Y2 271 aa13.24□□□□□ -0.29
TARDBP-203ENST00000439080 TRAV3A0A0B4J244 114 aa13.23□□□□□ -0.29
TARDBP-203ENST00000439080 A0A1W2PRX2 142 aa13.23□□□□□ -0.29
TARDBP-203ENST00000439080 ADARB2-AS1A8MUL3 147 aa13.23□□□□□ -0.29
TARDBP-203ENST00000439080 M0QZ24 198 aa13.23□□□□□ -0.29
TARDBP-203ENST00000439080 UPK2O00526 184 aa13.23□□□□□ -0.29
TARDBP-203ENST00000439080 B3GALNT1O75752 331 aa13.23□□□□□ -0.29
TARDBP-203ENST00000439080 OPN1MWP04001 364 aa13.23□□□□□ -0.29
TARDBP-203ENST00000439080 APELAP0DMC3 54 aa13.23□□□□□ -0.29
TARDBP-203ENST00000439080 OPN1MW2P0DN77 364 aa13.23□□□□□ -0.29
TARDBP-203ENST00000439080 OPN1MW3P0DN78 364 aa13.23□□□□□ -0.29
TARDBP-203ENST00000439080 HLA-GP17693 338 aa13.23□□□□□ -0.29
TARDBP-203ENST00000439080 UCP1P25874 307 aa13.23□□□□□ -0.29
TARDBP-203ENST00000439080 PSMB8P28062 276 aa13.23□□□□□ -0.29
TARDBP-203ENST00000439080 MAS1LP35410 378 aa13.23□□□□□ -0.29
TARDBP-203ENST00000439080 TRIM16LQ309B1 348 aa13.23□□□□□ -0.29
TARDBP-203ENST00000439080 AKIRIN2Q53H80 203 aa13.23□□□□□ -0.29
TARDBP-203ENST00000439080 CXorf66Q5JRM2 361 aaPredicted RBP13.23□□□□□ -0.29
TARDBP-203ENST00000439080 TSSC4Q9Y5U2 329 aaPredicted RBP13.23□□□□□ -0.29
TARDBP-203ENST00000439080 SOX15O60248 233 aa13.22□□□□□ -0.29
TARDBP-203ENST00000439080 IGLV1-40P01703 118 aa13.22□□□□□ -0.29
TARDBP-203ENST00000439080 RPLP1P05386 114 aaKnown RBP13.22□□□□□ -0.29
TARDBP-203ENST00000439080 ELANEP08246 267 aa13.22□□□□□ -0.29
TARDBP-203ENST00000439080 IL6RP08887 468 aaPredicted RBP13.22□□□□□ -0.29
TARDBP-203ENST00000439080 MYOD1P15172 320 aa13.22□□□□□ -0.29
TARDBP-203ENST00000439080 AKR1C4P17516 323 aa13.22□□□□□ -0.29
TARDBP-203ENST00000439080 ASPHD1Q5U4P2 390 aa13.22□□□□□ -0.29
TARDBP-203ENST00000439080 SGPP2Q8IWX5 399 aa13.22□□□□□ -0.29
TARDBP-203ENST00000439080 RNF152Q8N8N0 203 aa13.22□□□□□ -0.29
TARDBP-203ENST00000439080 SEC22AQ96IW7 307 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms