RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 ZNF843Q8N446 348 aa12.52□□□□□ -0.41
SGCE-205ENST00000437425 PSMG3Q9BT73 122 aaPredicted RBP12.52□□□□□ -0.41
SGCE-205ENST00000437425 GGACTQ9BVM4 153 aa12.52□□□□□ -0.41
SGCE-205ENST00000437425 UPK2O00526 184 aa12.51□□□□□ -0.41
SGCE-205ENST00000437425 SOX15O60248 233 aa12.51□□□□□ -0.41
SGCE-205ENST00000437425 LY6HO94772 140 aa12.51□□□□□ -0.41
SGCE-205ENST00000437425 ZP3P21754 424 aa12.51□□□□□ -0.41
SGCE-205ENST00000437425 USF1P22415 310 aaPredicted RBP12.51□□□□□ -0.41
SGCE-205ENST00000437425 RAB11AP62491 216 aa12.51□□□□□ -0.41
SGCE-205ENST00000437425 SERF2P84101 59 aa12.51□□□□□ -0.41
SGCE-205ENST00000437425 TOR2AQ5JU69 321 aa12.51□□□□□ -0.41
SGCE-205ENST00000437425 PXDC1Q5TGL8 231 aa12.51□□□□□ -0.41
SGCE-205ENST00000437425 ZNF525Q8N782 197 aa12.51□□□□□ -0.41
SGCE-205ENST00000437425 OR2G3Q8NGZ4 309 aa12.51□□□□□ -0.41
SGCE-205ENST00000437425 OR5B3Q8NH48 314 aa12.51□□□□□ -0.41
SGCE-205ENST00000437425 LYPD6BQ8NI32 183 aa12.51□□□□□ -0.41
SGCE-205ENST00000437425 HARBI1Q96MB7 349 aa12.51□□□□□ -0.41
SGCE-205ENST00000437425 TMEM147Q9BVK8 224 aa12.51□□□□□ -0.41
SGCE-205ENST00000437425 CYSRT1A8MQ03 144 aa12.5□□□□□ -0.41
SGCE-205ENST00000437425 BUB1B-PAK6H3BSN5 160 aa12.5□□□□□ -0.41
SGCE-205ENST00000437425 ENSAO43768 121 aaKnown RBP12.5□□□□□ -0.41
SGCE-205ENST00000437425 KBTBD11O94819 623 aa12.5□□□□□ -0.41
SGCE-205ENST00000437425 PRH1P02810 166 aa12.5□□□□□ -0.41
SGCE-205ENST00000437425 CAMLGP49069 296 aa12.5□□□□□ -0.41
SGCE-205ENST00000437425 PDLIM4P50479 330 aa12.5□□□□□ -0.41
SGCE-205ENST00000437425 OR2B8PP59922 312 aa12.5□□□□□ -0.41
SGCE-205ENST00000437425 LRRC75BQ2VPJ9 315 aa12.5□□□□□ -0.41
SGCE-205ENST00000437425 VKORC1L1Q8N0U8 176 aa12.5□□□□□ -0.41
SGCE-205ENST00000437425 OR11H6Q8NGC7 330 aa12.5□□□□□ -0.41
SGCE-205ENST00000437425 HEYLQ9NQ87 328 aaPredicted RBP12.5□□□□□ -0.41
SGCE-205ENST00000437425 ONECUT1Q9UBC0 465 aa12.5□□□□□ -0.41
SGCE-205ENST00000437425 TCF19Q9Y242 345 aa12.5□□□□□ -0.41
SGCE-205ENST00000437425 TIMM9Q9Y5J7 89 aa12.5□□□□□ -0.41
SGCE-205ENST00000437425 SPTBN1Q01082 2364 aaKnown RBP12.5□□□□□ -0.41
SGCE-205ENST00000437425 IGKV1-16P04430 117 aa12.49□□□□□ -0.41
SGCE-205ENST00000437425 PRTN3P24158 256 aa12.49□□□□□ -0.41
SGCE-205ENST00000437425 CEACAM3P40198 252 aa12.49□□□□□ -0.41
SGCE-205ENST00000437425 VDAC2P45880 294 aaPredicted RBP12.49□□□□□ -0.41
SGCE-205ENST00000437425 HOXA1P49639 335 aaPredicted RBP12.49□□□□□ -0.41
SGCE-205ENST00000437425 PJVKQ0ZLH3 352 aa12.49□□□□□ -0.41
SGCE-205ENST00000437425 VMA21Q3ZAQ7 101 aa12.49□□□□□ -0.41
SGCE-205ENST00000437425 AKR1C8PQ5T2L2 129 aa12.49□□□□□ -0.41
SGCE-205ENST00000437425 Q6ZRG5 221 aa12.49□□□□□ -0.41
SGCE-205ENST00000437425 LFNGQ8NES3 379 aa12.49□□□□□ -0.41
SGCE-205ENST00000437425 IGFBPL1Q8WX77 278 aa12.49□□□□□ -0.41
SGCE-205ENST00000437425 ZDHHC16Q969W1 377 aa12.49□□□□□ -0.41
SGCE-205ENST00000437425 OR4C12Q96R67 309 aa12.49□□□□□ -0.41
SGCE-205ENST00000437425 RNF5Q99942 180 aa12.49□□□□□ -0.41
SGCE-205ENST00000437425 UNKLQ9H9P5 680 aaKnown RBP12.49□□□□□ -0.41
SGCE-205ENST00000437425 OR51B2Q9Y5P1 312 aa12.49□□□□□ -0.41
SGCE-205ENST00000437425 KPTNQ9Y664 436 aa12.49□□□□□ -0.41
SGCE-205ENST00000437425 BTBD17A6NE02 478 aa12.48□□□□□ -0.41
SGCE-205ENST00000437425 C22orf46C9J442 243 aa12.48□□□□□ -0.41
SGCE-205ENST00000437425 NDUFS8O00217 210 aa12.48□□□□□ -0.41
SGCE-205ENST00000437425 IGHV2-5P01817 119 aa12.48□□□□□ -0.41
SGCE-205ENST00000437425 RAB2AP61019 212 aa12.48□□□□□ -0.41
SGCE-205ENST00000437425 PRCDQ00LT1 54 aa12.48□□□□□ -0.41
SGCE-205ENST00000437425 VWC2Q2TAL6 325 aa12.48□□□□□ -0.41
SGCE-205ENST00000437425 BTNL8Q6UX41 500 aa12.48□□□□□ -0.41
SGCE-205ENST00000437425 TMEM167AQ8TBQ9 72 aa12.48□□□□□ -0.41
SGCE-205ENST00000437425 WDR61Q9GZS3 305 aaKnown RBP12.48□□□□□ -0.41
SGCE-205ENST00000437425 MS4A7Q9GZW8 240 aaPredicted RBP12.48□□□□□ -0.41
SGCE-205ENST00000437425 SH3BGRL3Q9H299 93 aa12.48□□□□□ -0.41
SGCE-205ENST00000437425 UQCC1Q9NVA1 299 aa12.48□□□□□ -0.41
SGCE-205ENST00000437425 ZNRD1Q9P1U0 126 aa12.48□□□□□ -0.41
SGCE-205ENST00000437425 INSIG2Q9Y5U4 225 aa12.48□□□□□ -0.41
SGCE-205ENST00000437425 PMS2P5A8MQ11 134 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 INS-IGF2F8WCM5 200 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 TSPAN15O95858 294 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 IFNA10P01566 189 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 SAA1P0DJI8 122 aaPredicted RBP12.47□□□□□ -0.41
SGCE-205ENST00000437425 RPS16P62249 146 aaKnown RBP12.47□□□□□ -0.41
SGCE-205ENST00000437425 ARL16Q0P5N6 197 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 OR8G2PQ6IF36 304 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 TMEM182Q6ZP80 229 aaPredicted RBP12.47□□□□□ -0.41
SGCE-205ENST00000437425 CENPVQ7Z7K6 275 aaPredicted RBP12.47□□□□□ -0.41
SGCE-205ENST00000437425 HAPLN4Q86UW8 402 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 MRPL41Q8IXM3 137 aaKnown RBP12.47□□□□□ -0.41
SGCE-205ENST00000437425 RPEQ96AT9 228 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 CCL19Q99731 98 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 HRH4Q9H3N8 390 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 PLEKHA3Q9HB20 300 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 TRAV3A0A0B4J244 114 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 MPDU1O75352 247 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 HTR1DP28221 377 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 THNSL2Q86YJ6 484 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 CCDC28AQ8IWP9 274 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 TAF15Q92804 592 aaKnown RBP eCLIP12.47□□□□□ -0.41
SGCE-205ENST00000437425 COMMD5Q9GZQ3 224 aa12.47□□□□□ -0.41
SGCE-205ENST00000437425 RELNP78509 3460 aa12.46□□□□□ -0.41
SGCE-205ENST00000437425 DOCK11Q5JSL3 2073 aa12.46□□□□□ -0.41
SGCE-205ENST00000437425 A0A1W2PN81 502 aa12.46□□□□□ -0.42
SGCE-205ENST00000437425 SRRM4A7MD48 611 aaKnown RBP12.46□□□□□ -0.42
SGCE-205ENST00000437425 C15orf62A8K5M9 175 aa12.46□□□□□ -0.42
SGCE-205ENST00000437425 OOSP1A8MZH6 123 aa12.46□□□□□ -0.42
SGCE-205ENST00000437425 FNDC10F2Z333 226 aa12.46□□□□□ -0.42
SGCE-205ENST00000437425 C17orf112F2Z3M2 114 aa12.46□□□□□ -0.42
SGCE-205ENST00000437425 FOXH1O75593 365 aa12.46□□□□□ -0.42
SGCE-205ENST00000437425 HBE1P02100 147 aa12.46□□□□□ -0.42
SGCE-205ENST00000437425 MBP02144 154 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms