RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 CA2P00918 260 aa13.31□□□□□ -0.28
CALD1-209ENST00000436461 OR9G9P0C7N8 305 aa13.31□□□□□ -0.28
CALD1-209ENST00000436461 TMEM95Q3KNT9 176 aa13.31□□□□□ -0.28
CALD1-209ENST00000436461 PPP1R27Q86WC6 154 aa13.31□□□□□ -0.28
CALD1-209ENST00000436461 PUSL1Q8N0Z8 303 aaKnown RBP13.31□□□□□ -0.28
CALD1-209ENST00000436461 LGI3Q8N145 548 aa13.31□□□□□ -0.28
CALD1-209ENST00000436461 OR2A7Q96R45 310 aa13.31□□□□□ -0.28
CALD1-209ENST00000436461 RAB18Q9NP72 206 aa13.31□□□□□ -0.28
CALD1-209ENST00000436461 DUS4LO95620 317 aaKnown RBP13.3□□□□□ -0.28
CALD1-209ENST00000436461 GNB1P62873 340 aa13.3□□□□□ -0.28
CALD1-209ENST00000436461 SSBP2P81877 361 aaPredicted RBP13.3□□□□□ -0.28
CALD1-209ENST00000436461 POU2AF1Q16633 256 aa13.3□□□□□ -0.28
CALD1-209ENST00000436461 TEX45Q8NA69 505 aa13.3□□□□□ -0.28
CALD1-209ENST00000436461 UXS1Q8NBZ7 420 aa13.3□□□□□ -0.28
CALD1-209ENST00000436461 RNASE11Q8TAA1 199 aaKnown RBP13.3□□□□□ -0.28
CALD1-209ENST00000436461 ZNF431Q8TF32 576 aaPredicted RBP13.3□□□□□ -0.28
CALD1-209ENST00000436461 RANBP3Q9H6Z4 567 aaPredicted RBP13.3□□□□□ -0.28
CALD1-209ENST00000436461 ZNF430Q9H8G1 570 aaPredicted RBP13.3□□□□□ -0.28
CALD1-209ENST00000436461 C2CD3Q4AC94 2353 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 DBX1A6NMT0 343 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 ADAP1O75689 374 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 DHFRP00374 187 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 OPN1MWP04001 364 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 IL5P05113 134 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 HOXB5P09067 269 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 OPN1MW2P0DN77 364 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 OPN1MW3P0DN78 364 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 RAG2P55895 527 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 OR2B8PP59922 312 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 NDPQ00604 133 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 TATDN3Q17R31 274 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 C10orf55Q5SWW7 151 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 Q6ZSV7 163 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 H2BFWTQ7Z2G1 175 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 CHPT1Q8WUD6 406 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 NPFFR1Q9GZQ6 430 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 ZNF702PQ9H963 129 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 BET1LQ9NYM9 111 aa13.29□□□□□ -0.28
CALD1-209ENST00000436461 IGHV7-81A0A0B4J1V7 117 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 M0QZK8 103 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 CRYBA1P05813 215 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 PRSS8Q16651 343 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 Q6ZRM9 215 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 COQ8AQ8NI60 647 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 TMEM167AQ8TBQ9 72 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 MITD1Q8WV92 249 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 FAM103A1Q9BTL3 118 aaKnown RBP13.28□□□□□ -0.28
CALD1-209ENST00000436461 LINC00527Q9UJ94 153 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 A0A0B4J2A0 478 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 MPTX1A8MV57 137 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 UPK2O00526 184 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 HLA-DRB1P01911 266 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 IL6RP08887 468 aaPredicted RBP13.28□□□□□ -0.28
CALD1-209ENST00000436461 P0C879 139 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 SRPXP78539 464 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 TNXAQ16473 311 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 LRTM2Q8N967 370 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 VSTM2AQ8TAG5 236 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 IL22RA2Q969J5 263 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 GPR146Q96CH1 333 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 RRNAD1Q96FB5 475 aaKnown RBP13.28□□□□□ -0.28
CALD1-209ENST00000436461 PHB2Q99623 299 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 SHPKQ9UHJ6 478 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 ALG5Q9Y673 324 aa13.28□□□□□ -0.28
CALD1-209ENST00000436461 E7EUB6 86 aa13.27□□□□□ -0.29
CALD1-209ENST00000436461 CCSO14618 274 aa13.27□□□□□ -0.29
CALD1-209ENST00000436461 PRAF2O60831 178 aa13.27□□□□□ -0.29
CALD1-209ENST00000436461 NXPH3O95157 252 aa13.27□□□□□ -0.29
CALD1-209ENST00000436461 APELAP0DMC3 54 aa13.27□□□□□ -0.29
CALD1-209ENST00000436461 CX3CL1P78423 397 aa13.27□□□□□ -0.29
CALD1-209ENST00000436461 C12orf45Q8N5I9 185 aaPredicted RBP13.27□□□□□ -0.29
CALD1-209ENST00000436461 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.27□□□□□ -0.29
CALD1-209ENST00000436461 AIFM2Q9BRQ8 373 aa13.27□□□□□ -0.29
CALD1-209ENST00000436461 FBXO7Q9Y3I1 522 aa13.27□□□□□ -0.29
CALD1-209ENST00000436461 MMP24Q9Y5R2 645 aa13.27□□□□□ -0.29
CALD1-209ENST00000436461 CREBL2O60519 120 aaPredicted RBP13.26□□□□□ -0.29
CALD1-209ENST00000436461 VDAC1P21796 283 aa13.26□□□□□ -0.29
CALD1-209ENST00000436461 RPL8P62917 257 aaKnown RBP13.26□□□□□ -0.29
CALD1-209ENST00000436461 C2orf68Q2NKX9 166 aa13.26□□□□□ -0.29
CALD1-209ENST00000436461 ARSJQ5FYB0 599 aaPredicted RBP13.26□□□□□ -0.29
CALD1-209ENST00000436461 NMSQ5H8A3 153 aa13.26□□□□□ -0.29
CALD1-209ENST00000436461 GGNBP1Q5YKI7 109 aa13.26□□□□□ -0.29
CALD1-209ENST00000436461 GRPEL2Q8TAA5 225 aa13.26□□□□□ -0.29
CALD1-209ENST00000436461 PRSS22Q9GZN4 317 aa13.26□□□□□ -0.29
CALD1-209ENST00000436461 GPN1Q9HCN4 374 aaPredicted RBP13.26□□□□□ -0.29
CALD1-209ENST00000436461 PARP11Q9NR21 331 aa13.26□□□□□ -0.29
CALD1-209ENST00000436461 CACNG5Q9UF02 275 aa13.26□□□□□ -0.29
CALD1-209ENST00000436461 ATP6V0E1O15342 81 aa13.25□□□□□ -0.29
CALD1-209ENST00000436461 RBMXL2O75526 392 aaKnown RBP13.25□□□□□ -0.29
CALD1-209ENST00000436461 ATG12O94817 140 aa13.25□□□□□ -0.29
CALD1-209ENST00000436461 CNIH1O95406 144 aa13.25□□□□□ -0.29
CALD1-209ENST00000436461 FXYD3Q14802 87 aa13.25□□□□□ -0.29
CALD1-209ENST00000436461 SLC35E3Q7Z769 313 aa13.25□□□□□ -0.29
CALD1-209ENST00000436461 FAM219AQ8IW50 185 aa13.25□□□□□ -0.29
CALD1-209ENST00000436461 MMD2Q8IY49 270 aa13.25□□□□□ -0.29
CALD1-209ENST00000436461 ABHD5Q8WTS1 349 aa13.25□□□□□ -0.29
CALD1-209ENST00000436461 NOL4LQ96MY1 436 aaPredicted RBP13.25□□□□□ -0.29
CALD1-209ENST00000436461 QTRT1Q9BXR0 403 aaKnown RBP13.25□□□□□ -0.29
CALD1-209ENST00000436461 SNAPC5O75971 98 aa13.24□□□□□ -0.29
CALD1-209ENST00000436461 IGHG2P01859 326 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms