RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 BRWD1-AS2P59051 145 aa12.19□□□□□ -0.46
TREX1-201ENST00000433541 CD83Q01151 205 aa12.19□□□□□ -0.46
TREX1-201ENST00000433541 ZNF45Q02386 682 aa12.19□□□□□ -0.46
TREX1-201ENST00000433541 PRSS8Q16651 343 aa12.19□□□□□ -0.46
TREX1-201ENST00000433541 LCNL1Q6ZST4 164 aa12.19□□□□□ -0.46
TREX1-201ENST00000433541 WIPF2Q8TF74 440 aaPredicted RBP12.19□□□□□ -0.46
TREX1-201ENST00000433541 SCGB3A2Q96PL1 93 aa12.19□□□□□ -0.46
TREX1-201ENST00000433541 PLEKHA2Q9HB19 425 aa12.19□□□□□ -0.46
TREX1-201ENST00000433541 FOXA2Q9Y261 457 aaPredicted RBP12.19□□□□□ -0.46
TREX1-201ENST00000433541 MARCH11A6NNE9 402 aa12.18□□□□□ -0.46
TREX1-201ENST00000433541 ARPC1BO15143 372 aaKnown RBP12.18□□□□□ -0.46
TREX1-201ENST00000433541 TSPAN15O95858 294 aa12.18□□□□□ -0.46
TREX1-201ENST00000433541 KRASP01116 189 aa12.18□□□□□ -0.46
TREX1-201ENST00000433541 CRYGBP07316 175 aa12.18□□□□□ -0.46
TREX1-201ENST00000433541 CTSDP07339 412 aaPredicted RBP12.18□□□□□ -0.46
TREX1-201ENST00000433541 FOXE3Q13461 319 aa12.18□□□□□ -0.46
TREX1-201ENST00000433541 KLF9Q13886 244 aaPredicted RBP12.18□□□□□ -0.46
TREX1-201ENST00000433541 SURF2Q15527 256 aaPredicted RBP12.18□□□□□ -0.46
TREX1-201ENST00000433541 TRIM16LQ309B1 348 aa12.18□□□□□ -0.46
TREX1-201ENST00000433541 TCTEX1D4Q5JR98 221 aa12.18□□□□□ -0.46
TREX1-201ENST00000433541 OR4A47Q6IF82 309 aa12.18□□□□□ -0.46
TREX1-201ENST00000433541 KLHL30-AS1Q8NEE0 82 aa12.18□□□□□ -0.46
TREX1-201ENST00000433541 OR4F17Q8NGA8 305 aa12.18□□□□□ -0.46
TREX1-201ENST00000433541 RNASE11Q8TAA1 199 aaKnown RBP12.18□□□□□ -0.46
TREX1-201ENST00000433541 OR4F4Q96R69 305 aa12.18□□□□□ -0.46
TREX1-201ENST00000433541 PTTG2Q9NZH5 202 aa12.18□□□□□ -0.46
TREX1-201ENST00000433541 WNK1Q9H4A3 2382 aa12.18□□□□□ -0.46
TREX1-201ENST00000433541 C3orf85A0A1B0GTC6 90 aa12.17□□□□□ -0.46
TREX1-201ENST00000433541 IGHG4P01861 327 aa12.17□□□□□ -0.46
TREX1-201ENST00000433541 PF4P02776 101 aa12.17□□□□□ -0.46
TREX1-201ENST00000433541 RPLP1P05386 114 aaKnown RBP12.17□□□□□ -0.46
TREX1-201ENST00000433541 ELANEP08246 267 aa12.17□□□□□ -0.46
TREX1-201ENST00000433541 G6PCP35575 357 aa12.17□□□□□ -0.46
TREX1-201ENST00000433541 RND3P61587 244 aa12.17□□□□□ -0.46
TREX1-201ENST00000433541 RPL8P62917 257 aaKnown RBP12.17□□□□□ -0.46
TREX1-201ENST00000433541 OR5T1Q8NG75 326 aa12.17□□□□□ -0.46
TREX1-201ENST00000433541 OR4A5Q8NH83 315 aa12.17□□□□□ -0.46
TREX1-201ENST00000433541 TMEM167AQ8TBQ9 72 aa12.17□□□□□ -0.46
TREX1-201ENST00000433541 CASTOR1Q8WTX7 329 aa12.17□□□□□ -0.46
TREX1-201ENST00000433541 SRSF12Q8WXF0 261 aaKnown RBP12.17□□□□□ -0.46
TREX1-201ENST00000433541 FYTTD1Q96QD9 318 aaKnown RBP12.17□□□□□ -0.46
TREX1-201ENST00000433541 TMEM140Q9NV12 185 aa12.17□□□□□ -0.46
TREX1-201ENST00000433541 COA4Q9NYJ1 87 aa12.17□□□□□ -0.46
TREX1-201ENST00000433541 ZNF580Q9UK33 172 aa12.17□□□□□ -0.46
TREX1-201ENST00000433541 MSGN1A6NI15 193 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 CENPXA8MT69 81 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 H0Y980 276 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 SNAPC5O75971 98 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 RPL27AP46776 148 aaKnown RBP12.16□□□□□ -0.46
TREX1-201ENST00000433541 AKR1C2P52895 323 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 RPL23AP62750 156 aaKnown RBP12.16□□□□□ -0.46
TREX1-201ENST00000433541 BAK1Q16611 211 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 AKIRIN2Q53H80 203 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 C10orf55Q5SWW7 151 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 TREML4Q6UXN2 200 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 PUSL1Q8N0Z8 303 aaKnown RBP12.16□□□□□ -0.46
TREX1-201ENST00000433541 OR5M8Q8NGP6 311 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 S100ZQ8WXG8 99 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 MS4A10Q96PG2 267 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 SPIN2AQ99865 258 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 SPIN2BQ9BPZ2 258 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 COMMD5Q9GZQ3 224 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 ZFP57Q9NU63 452 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 SLC2A8Q9NY64 477 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 BET1LQ9NYM9 111 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 NUBP2Q9Y5Y2 271 aa12.16□□□□□ -0.46
TREX1-201ENST00000433541 RBMXL2O75526 392 aaKnown RBP12.15□□□□□ -0.46
TREX1-201ENST00000433541 ATG12O94817 140 aa12.15□□□□□ -0.46
TREX1-201ENST00000433541 EGR2P11161 476 aaPredicted RBP12.15□□□□□ -0.46
TREX1-201ENST00000433541 AKR1C4P17516 323 aa12.15□□□□□ -0.46
TREX1-201ENST00000433541 HLA-GP17693 338 aa12.15□□□□□ -0.46
TREX1-201ENST00000433541 MAS1LP35410 378 aa12.15□□□□□ -0.46
TREX1-201ENST00000433541 CRIP2P52943 208 aaPredicted RBP12.15□□□□□ -0.46
TREX1-201ENST00000433541 TPPP2P59282 170 aa12.15□□□□□ -0.46
TREX1-201ENST00000433541 CFHR3Q02985 330 aa12.15□□□□□ -0.46
TREX1-201ENST00000433541 SP6Q3SY56 376 aa12.15□□□□□ -0.46
TREX1-201ENST00000433541 PRR31Q5SQ13 230 aa12.15□□□□□ -0.46
TREX1-201ENST00000433541 H2BFWTQ7Z2G1 175 aa12.15□□□□□ -0.46
TREX1-201ENST00000433541 TMED4Q7Z7H5 227 aa12.15□□□□□ -0.46
TREX1-201ENST00000433541 SGPP2Q8IWX5 399 aa12.15□□□□□ -0.46
TREX1-201ENST00000433541 DEDD2Q8WXF8 326 aa12.15□□□□□ -0.46
TREX1-201ENST00000433541 MRGPRFQ96AM1 343 aa12.15□□□□□ -0.46
TREX1-201ENST00000433541 TP53RKQ96S44 253 aa12.15□□□□□ -0.46
TREX1-201ENST00000433541 FAM212BQ9NTI7 297 aaPredicted RBP12.15□□□□□ -0.46
TREX1-201ENST00000433541 TRGV3P03979 118 aa12.14□□□□□ -0.47
TREX1-201ENST00000433541 IL7P13232 177 aa12.14□□□□□ -0.47
TREX1-201ENST00000433541 PSMB8P28062 276 aa12.14□□□□□ -0.47
TREX1-201ENST00000433541 PPIFP30405 207 aaKnown RBP12.14□□□□□ -0.47
TREX1-201ENST00000433541 ZNF585BQ52M93 769 aa12.14□□□□□ -0.47
TREX1-201ENST00000433541 C8orf86Q6ZUL3 223 aa12.14□□□□□ -0.47
TREX1-201ENST00000433541 ZNF695Q8IW36 515 aa12.14□□□□□ -0.47
TREX1-201ENST00000433541 MINDY2Q8NBR6 621 aa12.14□□□□□ -0.47
TREX1-201ENST00000433541 TMEM68Q96MH6 324 aa12.14□□□□□ -0.47
TREX1-201ENST00000433541 OR5B12Q96R08 314 aa12.14□□□□□ -0.47
TREX1-201ENST00000433541 HINT2Q9BX68 163 aa12.14□□□□□ -0.47
TREX1-201ENST00000433541 C5orf66Q9H5L9 145 aa12.14□□□□□ -0.47
TREX1-201ENST00000433541 GPR132Q9UNW8 380 aa12.14□□□□□ -0.47
TREX1-201ENST00000433541 TRAV3A0A0B4J244 114 aa12.13□□□□□ -0.47
TREX1-201ENST00000433541 NAP1L6A6NFF2 107 aa12.13□□□□□ -0.47
TREX1-201ENST00000433541 UPK2O00526 184 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms