RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 NCOR1P1Q9H4R4 102 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 HEYLQ9NQ87 328 aaPredicted RBP12.01□□□□□ -0.49
RFTN1-203ENST00000432519 SPTBN1Q01082 2364 aaKnown RBP12.01□□□□□ -0.49
RFTN1-203ENST00000432519 TMEM178BH3BS89 294 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 RHEBQ15382 184 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 LINC01560Q8TB33 94 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 RNASE6Q93091 150 aaKnown RBP12.01□□□□□ -0.49
RFTN1-203ENST00000432519 SLC39A9Q9NUM3 307 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 CTSZQ9UBR2 303 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 TCF19Q9Y242 345 aa12.01□□□□□ -0.49
RFTN1-203ENST00000432519 ZNF729A6NN14 1252 aaPredicted RBP12□□□□□ -0.49
RFTN1-203ENST00000432519 PRSS46E5RG02 174 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 RAB7AP51149 207 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 SPCS3P61009 180 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 RPL31P62899 125 aaKnown RBP12□□□□□ -0.49
RFTN1-203ENST00000432519 DIAPH2-AS1Q14236 149 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 OR10G4Q8NGN3 311 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 OR10G9Q8NGN4 311 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 OR10G7Q8NGN6 311 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 C1orf159Q96HA4 380 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 YPEL4Q96NS1 127 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 LINC00574Q9H8X3 128 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 REG1BP48304 166 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 DLX1P56177 255 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 ERVK-16P61578 105 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 TMEM200BQ69YZ2 307 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 SLC25A48Q6ZT89 311 aaKnown RBP12□□□□□ -0.49
RFTN1-203ENST00000432519 KDF1Q8NAX2 398 aaPredicted RBP12□□□□□ -0.49
RFTN1-203ENST00000432519 OR4S2Q8NH73 311 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 CORO2AQ92828 525 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 CISD1Q9NZ45 108 aaKnown RBP12□□□□□ -0.49
RFTN1-203ENST00000432519 MSRB2Q9Y3D2 182 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 TIMM9Q9Y5J7 89 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 COL12A1Q99715 3063 aa12□□□□□ -0.49
RFTN1-203ENST00000432519 MALRD1Q5VYJ5 2156 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 LYNX1G3V0Z9 82 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 ITGB1BP1O14713 200 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 LYNX1P0DP58 116 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 PAX6P26367 422 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 CD1BP29016 333 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 TAGLN2P37802 199 aaKnown RBP11.99□□□□□ -0.49
RFTN1-203ENST00000432519 CD81P60033 236 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 PRB3Q04118 309 aaPredicted RBP11.99□□□□□ -0.49
RFTN1-203ENST00000432519 ATP6V1FQ16864 119 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 RAB24Q969Q5 203 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 URGCP-MRPS24S4R325 110 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 NAV3Q8IVL0 2385 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 TRAV38-1A0A0B4J264 116 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 SMCO3A2RU48 225 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 C15orf61A6NNL5 157 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 TSPAN9O75954 239 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 TMEM106BQ9NUM4 274 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 GAB2Q9UQC2 676 aa11.99□□□□□ -0.49
RFTN1-203ENST00000432519 PPIAL4EA0A075B759 164 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.98□□□□□ -0.49
RFTN1-203ENST00000432519 PPIAL4DF5H284 164 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 SIAH2O43255 324 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 OR2C1O95371 312 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 PPIAL4FP0DN26 164 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 NHLH1Q02575 133 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 TREML4Q6UXN2 200 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 H1FXQ92522 213 aaKnown RBP11.98□□□□□ -0.49
RFTN1-203ENST00000432519 HINT2Q9BX68 163 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 MS4A5Q9H3V2 200 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 TUBA4BQ9H853 241 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 PPIAL4AQ9Y536 164 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 LINC00312Q9Y6C7 94 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 hADV38S2A0JD32 116 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 FAM90A27PA6NNH2 459 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 MT-ND4LP03901 98 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 NCMAPQ5T1S8 102 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 NIPSNAP3BQ9BS92 247 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 WDR83OSQ9Y284 106 aa11.98□□□□□ -0.49
RFTN1-203ENST00000432519 FAM90A9PA6NNJ1 464 aa11.97□□□□□ -0.49
RFTN1-203ENST00000432519 TNFRSF13BO14836 293 aaPredicted RBP11.97□□□□□ -0.49
RFTN1-203ENST00000432519 RAB5AP20339 215 aa11.97□□□□□ -0.49
RFTN1-203ENST00000432519 RPL35P42766 123 aaKnown RBP11.97□□□□□ -0.49
RFTN1-203ENST00000432519 HOXA1P49639 335 aaPredicted RBP11.97□□□□□ -0.49
RFTN1-203ENST00000432519 THBS3P49746 956 aa11.97□□□□□ -0.49
RFTN1-203ENST00000432519 FAM122AQ96E09 287 aa11.97□□□□□ -0.49
RFTN1-203ENST00000432519 VKORC1Q9BQB6 163 aa11.97□□□□□ -0.49
RFTN1-203ENST00000432519 PATZ1Q9HBE1 687 aaKnown RBP11.97□□□□□ -0.49
RFTN1-203ENST00000432519 TMEM14BQ9NUH8 114 aa11.97□□□□□ -0.49
RFTN1-203ENST00000432519 NDUFA2O43678 99 aa11.97□□□□□ -0.49
RFTN1-203ENST00000432519 FOLR2P14207 255 aa11.97□□□□□ -0.49
RFTN1-203ENST00000432519 PDLIM3Q53GG5 364 aaPredicted RBP11.97□□□□□ -0.49
RFTN1-203ENST00000432519 MOB3BQ86TA1 216 aa11.97□□□□□ -0.49
RFTN1-203ENST00000432519 OR52E5Q8NH55 327 aa11.97□□□□□ -0.49
RFTN1-203ENST00000432519 TVP23CQ96ET8 276 aa11.97□□□□□ -0.49
RFTN1-203ENST00000432519 MRPL20Q9BYC9 149 aaKnown RBP11.97□□□□□ -0.49
RFTN1-203ENST00000432519 NKX6-3A6NJ46 265 aa11.96□□□□□ -0.49
RFTN1-203ENST00000432519 YIF1AO95070 293 aa11.96□□□□□ -0.49
RFTN1-203ENST00000432519 CXCL1P09341 107 aa11.96□□□□□ -0.49
RFTN1-203ENST00000432519 ARSJQ5FYB0 599 aaPredicted RBP11.96□□□□□ -0.49
RFTN1-203ENST00000432519 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.96□□□□□ -0.49
RFTN1-203ENST00000432519 OR13D1Q8NGV5 346 aa11.96□□□□□ -0.49
RFTN1-203ENST00000432519 MGST2Q99735 147 aa11.96□□□□□ -0.49
RFTN1-203ENST00000432519 SSX3Q99909 188 aa11.96□□□□□ -0.49
RFTN1-203ENST00000432519 DYNLRB1Q9NP97 96 aa11.96□□□□□ -0.49
RFTN1-203ENST00000432519 VAX2Q9UIW0 290 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms