RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 MGST2Q99735 147 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 MS4A5Q9H3V2 200 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 TMEM242Q9NWH2 141 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 DCAF16Q9NXF7 216 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 OR6C3Q9NZP0 311 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 B4GALT7Q9UBV7 327 aa5.94□□□□□ -1.46
COL28A1-202ENST00000430711 YTHDF2Q9Y5A9 579 aaKnown RBP5.94□□□□□ -1.46
COL28A1-202ENST00000430711 IGKV1D-17A0A075B6S4 117 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 CTXND1A0A1B0GTU2 59 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 TMEM30CPA0ZSE6 113 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 PRSS46E5RG02 174 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 J3QL48 77 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 K7EN84 100 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 SLC17A3O00476 420 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 SH2D1BO14796 132 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 FCGR3BO75015 233 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 TNFSF15O95150 251 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 OPN1MWP04001 364 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 CECR9P0C854 216 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 ARL14EPLP0DKL9 152 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 OPN1MW2P0DN77 364 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 OPN1MW3P0DN78 364 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 PLA2G2AP14555 144 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 RPL15P61313 204 aaKnown RBP5.93□□□□□ -1.46
COL28A1-202ENST00000430711 PNRC1Q12796 327 aaPredicted RBP5.93□□□□□ -1.46
COL28A1-202ENST00000430711 PMS2P11Q13670 270 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 SLC10A1Q14973 349 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 C22orf34Q6ZV56 151 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 GALMQ96C23 342 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 TRIB1Q96RU8 372 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 P2RX4Q99571 388 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 TMEM147Q9BVK8 224 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 HELZ2Q9BYK8 2649 aaKnown RBP5.93□□□□□ -1.46
COL28A1-202ENST00000430711 ELOA3CA0A087WX78 387 aaPredicted RBP5.93□□□□□ -1.46
COL28A1-202ENST00000430711 TRGV5A0A0B4J1U4 118 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 SMCO3A2RU48 225 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 IQCF6A8MYZ5 107 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 NKX2-8O15522 239 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 GATCO43716 136 aaKnown RBP5.93□□□□□ -1.46
COL28A1-202ENST00000430711 HRASP01112 189 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 SOX8P57073 446 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 JOSD1Q15040 202 aaPredicted RBP5.93□□□□□ -1.46
COL28A1-202ENST00000430711 MLANAQ16655 118 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 CST9LP1Q5W188 147 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 DBX2Q6ZNG2 339 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 R3HDM4Q96D70 268 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 BBC3Q96PG8 261 aaPredicted RBP5.93□□□□□ -1.46
COL28A1-202ENST00000430711 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 KRTAP9-8Q9BYQ0 159 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
COL28A1-202ENST00000430711 SEPSECSQ9HD40 501 aaKnown RBP5.93□□□□□ -1.46
COL28A1-202ENST00000430711 A8MWP6 167 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 YKT6O15498 198 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 MMP23AO75900 390 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 GATA2P23769 480 aaPredicted RBP5.92□□□□□ -1.46
COL28A1-202ENST00000430711 KIR2DL2P43627 348 aaPredicted RBP5.92□□□□□ -1.46
COL28A1-202ENST00000430711 CDC34P49427 236 aaPredicted RBP5.92□□□□□ -1.46
COL28A1-202ENST00000430711 PSMB3P49720 205 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 VWC2Q2TAL6 325 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 MOB1BQ7L9L4 216 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 H2BFWTQ7Z2G1 175 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 REC114Q7Z4M0 266 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 OR10P1Q8NGE3 313 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 OPN3Q9H1Y3 402 aaPredicted RBP5.92□□□□□ -1.46
COL28A1-202ENST00000430711 OPA3Q9H6K4 179 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.92□□□□□ -1.46
COL28A1-202ENST00000430711 CBLN4Q9NTU7 201 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 DUSP13Q9UII6 198 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 PITPNC1Q9UKF7 332 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 TANC2Q9HCD6 1990 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 GGCTO75223 188 aaKnown RBP5.92□□□□□ -1.46
COL28A1-202ENST00000430711 PRB4P10163 310 aaPredicted RBP5.92□□□□□ -1.46
COL28A1-202ENST00000430711 CBLN1P23435 193 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 S100GP29377 79 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 DUTP33316 252 aaKnown RBP5.92□□□□□ -1.46
COL28A1-202ENST00000430711 ADMP35318 185 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 PKIAP61925 76 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 OR5I1Q13606 314 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 ARSJQ5FYB0 599 aaPredicted RBP5.92□□□□□ -1.46
COL28A1-202ENST00000430711 HES3Q5TGS1 186 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 TMEM144Q7Z5S9 345 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 LHFPL4Q7Z7J7 247 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 LRRC29Q8WV35 223 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 NEIL1Q96FI4 390 aaPredicted RBP5.92□□□□□ -1.46
COL28A1-202ENST00000430711 DDA1Q9BW61 102 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 GGTLC1Q9BX51 225 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 ZDHHC11Q9H8X9 412 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 CLCF1Q9UBD9 225 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 WDR83OSQ9Y284 106 aa5.92□□□□□ -1.46
COL28A1-202ENST00000430711 PPP5D1E7EU14 171 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 SPINK4O60575 86 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 RAC2P15153 192 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 TIMP3P35625 211 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 CDKN1AP38936 164 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 VDAC2P45880 294 aaPredicted RBP5.91□□□□□ -1.46
COL28A1-202ENST00000430711 LGALS4P56470 323 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 LOXL3P58215 753 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 CYB5R2Q6BCY4 276 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 KRTAP5-3Q6L8H2 238 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 FAM90A1Q86YD7 464 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms