RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 TFF1P04155 84 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 SERPINE2P07093 398 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 OR8U9P0C7N5 309 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 PPIAL4GP0DN37 164 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 OPN1MW2P0DN77 364 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 OPN1MW3P0DN78 364 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 IGHV4-38-2P0DP08 117 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 RAB5CP51148 216 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 TAS2R30P59541 319 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 BAXQ07812 192 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 AESQ08117 197 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 ZNF585BQ52M93 769 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 KRBOX4Q5JUW0 171 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 FAM74A1Q5RGS3 127 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 STUMQ69YW2 141 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 IL34Q6ZMJ4 242 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 ZNF66Q6ZN08 573 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 FAM219AQ8IW50 185 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 ZNF561Q8N587 486 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 TMEM252Q8N6L7 170 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 OR8U1Q8NH10 309 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 TMED6Q8WW62 240 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 IL1F10Q8WWZ1 152 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 GPR146Q96CH1 333 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 SDSLQ96GA7 329 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 YPEL2Q96QA6 119 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 RAB40CQ96S21 281 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 FAM234AQ9H0X4 552 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 RAB9BQ9NP90 201 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 ZC4H2Q9NQZ6 224 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 LYRM2Q9NU23 88 aaPredicted RBP7.02□□□□□ -1.29
HDAC1-202ENST00000428704 TAS2R3Q9NYW6 316 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 KAAG1Q9UBP8 84 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 SOX21Q9Y651 276 aaPredicted RBP7.02□□□□□ -1.29
HDAC1-202ENST00000428704 U3KQE9 123 aa7.02□□□□□ -1.29
HDAC1-202ENST00000428704 HERC2O95714 4834 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 TRAV40A0A0B4J280 105 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 F2RL2O00254 374 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 SPINT2O43291 252 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 IGKV1-39P01597 117 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 IGKV1D-39P04432 117 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 SPP1P10451 314 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 SELLP14151 372 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 MUC1P15941 1255 aaPredicted RBP7.01□□□□□ -1.29
HDAC1-202ENST00000428704 GLIPR1P48060 266 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 CEBPDP49716 269 aaPredicted RBP7.01□□□□□ -1.29
HDAC1-202ENST00000428704 ARHGDIBP52566 201 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 PAX9P55771 341 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 POLR2GP62487 172 aaKnown RBP eCLIP7.01□□□□□ -1.29
HDAC1-202ENST00000428704 ZNF266Q14584 549 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 TMEM30BQ3MIR4 351 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 CXorf66Q5JRM2 361 aaPredicted RBP7.01□□□□□ -1.29
HDAC1-202ENST00000428704 FOXRED2Q8IWF2 684 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 FAM216BQ8N7L0 139 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 OR1S2Q8NGQ3 325 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 OR1L1Q8NH94 360 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 ARL11Q969Q4 196 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 CCL13Q99616 98 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 AGMATQ9BSE5 352 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 HIPK2Q9H2X6 1198 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 LINC00574Q9H8X3 128 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 OR2S2Q9NQN1 319 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 PARP11Q9NR21 331 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 OR6C3Q9NZP0 311 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 JPT1Q9UK76 154 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 RBM7Q9Y580 266 aaKnown RBP7.01□□□□□ -1.29
HDAC1-202ENST00000428704 WSB1Q9Y6I7 421 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 RYR1P21817 5038 aa7.01□□□□□ -1.29
HDAC1-202ENST00000428704 COL7A1Q02388 2944 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 IGHV3OR16-10A0A075B7F0 116 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 TRAV39A0A0B4J263 110 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 MDFIC2A0A1B0GVS7 189 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 ODAMA1E959 279 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 DVL1O14640 695 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 TOR1AO14656 332 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 TNFSF12O43508 249 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 NDUFA2O43678 99 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 ENSAO43768 121 aaKnown RBP7□□□□□ -1.29
HDAC1-202ENST00000428704 P0C879 139 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 GABRA2P47869 451 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 VAMP2P63027 116 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 EWSR1Q01844 656 aaKnown RBP eCLIP7□□□□□ -1.29
HDAC1-202ENST00000428704 NHLH2Q02577 135 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 PJVKQ0ZLH3 352 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 CATR1Q13166 79 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 C10orf91Q5T1B1 145 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 BTNL8Q6UX41 500 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 BTNL3Q6UXE8 466 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 C9orf139Q6ZV77 190 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 COMMD1Q8N668 190 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 OR52L2PQ8NGH6 319 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 OR13A1Q8NGR1 328 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 CD300LFQ8TDQ1 290 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 MRGPRDQ8TDS7 321 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 CORO2AQ92828 525 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 LINC00052Q96N35 136 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 TBX15Q96SF7 602 aa7□□□□□ -1.29
HDAC1-202ENST00000428704 TSNAXQ99598 290 aaKnown RBP7□□□□□ -1.29
HDAC1-202ENST00000428704 HSD17B10Q99714 261 aaKnown RBP7□□□□□ -1.29
HDAC1-202ENST00000428704 SIRPDQ9H106 197 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms