RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 TALDO1P37837 337 aa13.63□□□□□ -0.23
UPK3BP1-201ENST00000428678 ARFRP1Q13795 201 aa13.63□□□□□ -0.23
UPK3BP1-201ENST00000428678 Q6ZWC4 215 aa13.63□□□□□ -0.23
UPK3BP1-201ENST00000428678 ZNF645Q8N7E2 425 aa13.63□□□□□ -0.23
UPK3BP1-201ENST00000428678 OR10R2Q8NGX6 335 aa13.63□□□□□ -0.23
UPK3BP1-201ENST00000428678 SLC2A9Q9NRM0 540 aa13.63□□□□□ -0.23
UPK3BP1-201ENST00000428678 V9GY05 133 aa13.63□□□□□ -0.23
UPK3BP1-201ENST00000428678 TRAV25A0A0B4J276 109 aa13.62□□□□□ -0.23
UPK3BP1-201ENST00000428678 E7EUB6 86 aa13.62□□□□□ -0.23
UPK3BP1-201ENST00000428678 MFNGO00587 321 aa13.62□□□□□ -0.23
UPK3BP1-201ENST00000428678 KBTBD11O94819 623 aa13.62□□□□□ -0.23
UPK3BP1-201ENST00000428678 DHFRP00374 187 aa13.62□□□□□ -0.23
UPK3BP1-201ENST00000428678 AREGP15514 252 aa13.62□□□□□ -0.23
UPK3BP1-201ENST00000428678 HIST1H1DP16402 221 aaKnown RBP13.62□□□□□ -0.23
UPK3BP1-201ENST00000428678 VSTM2AQ8TAG5 236 aa13.62□□□□□ -0.23
UPK3BP1-201ENST00000428678 OR2A7Q96R45 310 aa13.62□□□□□ -0.23
UPK3BP1-201ENST00000428678 CENPOQ9BU64 300 aa13.62□□□□□ -0.23
UPK3BP1-201ENST00000428678 IGKV1D-8A0A087WSZ0 117 aa13.61□□□□□ -0.23
UPK3BP1-201ENST00000428678 A0A1B0GW64 132 aa13.61□□□□□ -0.23
UPK3BP1-201ENST00000428678 DEFA4P12838 97 aa13.61□□□□□ -0.23
UPK3BP1-201ENST00000428678 CD36P16671 472 aa13.61□□□□□ -0.23
UPK3BP1-201ENST00000428678 PSMB6P28072 239 aa13.61□□□□□ -0.23
UPK3BP1-201ENST00000428678 RPL30P62888 115 aaKnown RBP13.61□□□□□ -0.23
UPK3BP1-201ENST00000428678 TRAM1Q15629 374 aa13.61□□□□□ -0.23
UPK3BP1-201ENST00000428678 ZNF585BQ52M93 769 aa13.61□□□□□ -0.23
UPK3BP1-201ENST00000428678 UNQ9165/PRO28630Q6UXU0 137 aa13.61□□□□□ -0.23
UPK3BP1-201ENST00000428678 SLC38A6Q8IZM9 456 aa13.61□□□□□ -0.23
UPK3BP1-201ENST00000428678 OR2C3Q8N628 320 aa13.61□□□□□ -0.23
UPK3BP1-201ENST00000428678 OR4S2Q8NH73 311 aa13.61□□□□□ -0.23
UPK3BP1-201ENST00000428678 MARC2Q969Z3 335 aa13.61□□□□□ -0.23
UPK3BP1-201ENST00000428678 UBQLN2Q9UHD9 624 aa13.61□□□□□ -0.23
UPK3BP1-201ENST00000428678 RBMX2Q9Y388 322 aaKnown RBP13.61□□□□□ -0.23
UPK3BP1-201ENST00000428678 PCLOQ9Y6V0 5065 aa13.61□□□□□ -0.23
UPK3BP1-201ENST00000428678 MFSD2BA6NFX1 497 aa13.6□□□□□ -0.23
UPK3BP1-201ENST00000428678 ERICH4A6NGS2 130 aa13.6□□□□□ -0.23
UPK3BP1-201ENST00000428678 REG1AP05451 166 aa13.6□□□□□ -0.23
UPK3BP1-201ENST00000428678 CLEC3BP05452 202 aa13.6□□□□□ -0.23
UPK3BP1-201ENST00000428678 CRYGCP07315 174 aa13.6□□□□□ -0.23
UPK3BP1-201ENST00000428678 ZNF735P0CB33 412 aa13.6□□□□□ -0.23
UPK3BP1-201ENST00000428678 HIST1H1BP16401 226 aaKnown RBP13.6□□□□□ -0.23
UPK3BP1-201ENST00000428678 MAS1LP35410 378 aa13.6□□□□□ -0.23
UPK3BP1-201ENST00000428678 PSMD7P51665 324 aa13.6□□□□□ -0.23
UPK3BP1-201ENST00000428678 Q6ZS49 121 aa13.6□□□□□ -0.23
UPK3BP1-201ENST00000428678 TMEM217Q8N7C4 229 aa13.6□□□□□ -0.23
UPK3BP1-201ENST00000428678 TMEM167AQ8TBQ9 72 aa13.6□□□□□ -0.23
UPK3BP1-201ENST00000428678 TCTEX1D2Q8WW35 142 aa13.6□□□□□ -0.23
UPK3BP1-201ENST00000428678 TRBV7-1A0A0A6YYK4 115 aa13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 IGHV3-35A0A0C4DH35 117 aa13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 RAB27BO00194 218 aa13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 UBE2CO00762 179 aa13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 CTRB1P17538 263 aa13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 ATF4P18848 351 aaPredicted RBP13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 NFYAP23511 347 aaPredicted RBP13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 CRHBPP24387 322 aa13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 PSMA1P25786 263 aaKnown RBP13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 FABP5Q01469 135 aa13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 IRF3Q14653 427 aa13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 CTRB2Q6GPI1 263 aa13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 PUSL1Q8N0Z8 303 aaKnown RBP13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 STPG3Q8N7X2 389 aa13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 PHLDA1Q8WV24 401 aaPredicted RBP13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 SCN3BQ9NY72 215 aa13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 MRPL27Q9P0M9 148 aaKnown RBP13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 OR2W1Q9Y3N9 320 aa13.59□□□□□ -0.23
UPK3BP1-201ENST00000428678 SLC22A5O76082 557 aa13.58□□□□□ -0.24
UPK3BP1-201ENST00000428678 C8orf88P0DMB2 117 aa13.58□□□□□ -0.24
UPK3BP1-201ENST00000428678 GALP22466 123 aa13.58□□□□□ -0.24
UPK3BP1-201ENST00000428678 GPR183P32249 361 aa13.58□□□□□ -0.24
UPK3BP1-201ENST00000428678 RCN1Q15293 331 aa13.58□□□□□ -0.24
UPK3BP1-201ENST00000428678 LGALS9CQ6DKI2 356 aa13.58□□□□□ -0.24
UPK3BP1-201ENST00000428678 SSX9Q7RTT3 188 aa13.58□□□□□ -0.24
UPK3BP1-201ENST00000428678 RNF183Q96D59 192 aa13.58□□□□□ -0.24
UPK3BP1-201ENST00000428678 CXorf58Q96LI9 332 aa13.58□□□□□ -0.24
UPK3BP1-201ENST00000428678 SPAG8Q99932 426 aaPredicted RBP13.58□□□□□ -0.24
UPK3BP1-201ENST00000428678 ELF5Q9UKW6 265 aaPredicted RBP13.58□□□□□ -0.24
UPK3BP1-201ENST00000428678 SPATA2Q9UM82 520 aa13.58□□□□□ -0.24
UPK3BP1-201ENST00000428678 UFC1Q9Y3C8 167 aa13.58□□□□□ -0.24
UPK3BP1-201ENST00000428678 IGLV11-55A0A075B6I3 123 aa13.57□□□□□ -0.24
UPK3BP1-201ENST00000428678 HLA-DQB1P01920 261 aa13.57□□□□□ -0.24
UPK3BP1-201ENST00000428678 MYOD1P15172 320 aa13.57□□□□□ -0.24
UPK3BP1-201ENST00000428678 RPL35AP18077 110 aaKnown RBP13.57□□□□□ -0.24
UPK3BP1-201ENST00000428678 DTYMKP23919 212 aa13.57□□□□□ -0.24
UPK3BP1-201ENST00000428678 RPL8P62917 257 aaKnown RBP13.57□□□□□ -0.24
UPK3BP1-201ENST00000428678 KLK9Q2XQG4 91 aa13.57□□□□□ -0.24
UPK3BP1-201ENST00000428678 HSD17B10Q99714 261 aaKnown RBP13.57□□□□□ -0.24
UPK3BP1-201ENST00000428678 C5orf66Q9H5L9 145 aa13.57□□□□□ -0.24
UPK3BP1-201ENST00000428678 KLK9Q9UKQ9 250 aa13.57□□□□□ -0.24
UPK3BP1-201ENST00000428678 IGKV1D-13A0A0B4J2D9 117 aa13.56□□□□□ -0.24
UPK3BP1-201ENST00000428678 KIR2DL5BA0A0G2JN68 375 aa13.56□□□□□ -0.24
UPK3BP1-201ENST00000428678 KIR2DL5BA0A0G2JPC4 375 aa13.56□□□□□ -0.24
UPK3BP1-201ENST00000428678 METTL21EPA6NDL7 271 aa13.56□□□□□ -0.24
UPK3BP1-201ENST00000428678 IGLV2-14P01704 120 aa13.56□□□□□ -0.24
UPK3BP1-201ENST00000428678 IGKV1-13P0DP09 117 aa13.56□□□□□ -0.24
UPK3BP1-201ENST00000428678 RAB6AP20340 208 aa13.56□□□□□ -0.24
UPK3BP1-201ENST00000428678 ELLP55199 621 aaPredicted RBP13.56□□□□□ -0.24
UPK3BP1-201ENST00000428678 OR10A3P58181 314 aa13.56□□□□□ -0.24
UPK3BP1-201ENST00000428678 PLET1Q6UQ28 207 aa13.56□□□□□ -0.24
UPK3BP1-201ENST00000428678 KIR2DL5AQ8N109 375 aa13.56□□□□□ -0.24
UPK3BP1-201ENST00000428678 KIR2DL5BQ8NHK3 375 aa13.56□□□□□ -0.24
UPK3BP1-201ENST00000428678 ACOT13Q9NPJ3 140 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms