RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 SDF2L1Q9HCN8 221 aa15.82■□□□□ 0.12
SNX17-202ENST00000427123 PLCE1Q9P212 2302 aa15.81■□□□□ 0.12
SNX17-202ENST00000427123 GVINP1Q7Z2Y8 2422 aa15.81■□□□□ 0.12
SNX17-202ENST00000427123 RRHO14718 337 aa15.81■□□□□ 0.12
SNX17-202ENST00000427123 HMGB3O15347 200 aaKnown RBP15.81■□□□□ 0.12
SNX17-202ENST00000427123 HRASP01112 189 aa15.81■□□□□ 0.12
SNX17-202ENST00000427123 NDUFB7P17568 137 aa15.81■□□□□ 0.12
SNX17-202ENST00000427123 CDC34P49427 236 aaPredicted RBP15.81■□□□□ 0.12
SNX17-202ENST00000427123 MEF2CQ06413 473 aaPredicted RBP15.81■□□□□ 0.12
SNX17-202ENST00000427123 ELOBQ15370 118 aa15.81■□□□□ 0.12
SNX17-202ENST00000427123 OR10A7Q8NGE5 316 aa15.81■□□□□ 0.12
SNX17-202ENST00000427123 SNRNP40Q96DI7 357 aaKnown RBP15.81■□□□□ 0.12
SNX17-202ENST00000427123 GAL3ST2Q9H3Q3 398 aa15.81■□□□□ 0.12
SNX17-202ENST00000427123 TMEM14BQ9NUH8 114 aa15.81■□□□□ 0.12
SNX17-202ENST00000427123 CEP250Q9BV73 2442 aa15.81■□□□□ 0.12
SNX17-202ENST00000427123 SMCO3A2RU48 225 aa15.8■□□□□ 0.12
SNX17-202ENST00000427123 SEC14L6B5MCN3 397 aa15.8■□□□□ 0.12
SNX17-202ENST00000427123 TMEM250H0YL14 139 aa15.8■□□□□ 0.12
SNX17-202ENST00000427123 K7ENP7 123 aa15.8■□□□□ 0.12
SNX17-202ENST00000427123 MMP23AO75900 390 aa15.8■□□□□ 0.12
SNX17-202ENST00000427123 WDR25Q64LD2 544 aaPredicted RBP15.8■□□□□ 0.12
SNX17-202ENST00000427123 C1orf87Q8N0U7 546 aa15.8■□□□□ 0.12
SNX17-202ENST00000427123 TMPRSS5Q9H3S3 457 aa15.8■□□□□ 0.12
SNX17-202ENST00000427123 SAP30LQ9HAJ7 183 aa15.8■□□□□ 0.12
SNX17-202ENST00000427123 TMEM242Q9NWH2 141 aa15.8■□□□□ 0.12
SNX17-202ENST00000427123 SLC25A10Q9UBX3 287 aaPredicted RBP15.8■□□□□ 0.12
SNX17-202ENST00000427123 VSTM5A8MXK1 200 aa15.8■□□□□ 0.12
SNX17-202ENST00000427123 UBE2CO00762 179 aa15.8■□□□□ 0.12
SNX17-202ENST00000427123 HSPE1P61604 102 aaKnown RBP15.8■□□□□ 0.12
SNX17-202ENST00000427123 RBPJQ06330 500 aa15.8■□□□□ 0.12
SNX17-202ENST00000427123 PRR30Q53SZ7 412 aaPredicted RBP15.8■□□□□ 0.12
SNX17-202ENST00000427123 Q8WTZ3 238 aa15.8■□□□□ 0.12
SNX17-202ENST00000427123 ZCCHC14Q8WYQ9 949 aaKnown RBP15.8■□□□□ 0.12
SNX17-202ENST00000427123 MUC6Q6W4X9 2439 aa15.8■□□□□ 0.12
SNX17-202ENST00000427123 BOD1L1Q8NFC6 3051 aa15.8■□□□□ 0.12
SNX17-202ENST00000427123 ZGRF1Q86YA3 2104 aa15.79■□□□□ 0.12
SNX17-202ENST00000427123 PLA2G5P39877 138 aa15.79■□□□□ 0.12
SNX17-202ENST00000427123 OPRK1P41145 380 aa15.79■□□□□ 0.12
SNX17-202ENST00000427123 TREML4Q6UXN2 200 aa15.79■□□□□ 0.12
SNX17-202ENST00000427123 TMEM170AQ8WVE7 144 aa15.79■□□□□ 0.12
SNX17-202ENST00000427123 NAT8Q9UHE5 227 aa15.79■□□□□ 0.12
SNX17-202ENST00000427123 RTL8BQ17RB0 113 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 ZNF343Q6P1L6 599 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 CYP2G1PQ6ZSU1 146 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 ABHD12Q8N2K0 398 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 RAB1CQ92928 201 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 SMIM7Q9BQ49 75 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 SCNM1Q9BWG6 230 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 ENY2Q9NPA8 101 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 NGBQ9NPG2 151 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 PPIAL4EA0A075B759 164 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 PPIAL4DF5H284 164 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 TMEM178BH3BS89 294 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 KBTBD11O94819 623 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 PPIAL4FP0DN26 164 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 RPS10P46783 165 aaKnown RBP15.78■□□□□ 0.12
SNX17-202ENST00000427123 ERVFRD-1P60508 538 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 TMEM249Q2WGJ8 235 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 SLC24A4Q8NFF2 622 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 MS4A5Q9H3V2 200 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 KCNIP2Q9NS61 270 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 METTL1Q9UBP6 276 aaKnown RBP15.78■□□□□ 0.12
SNX17-202ENST00000427123 PRNDQ9UKY0 176 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 PPIAL4AQ9Y536 164 aa15.78■□□□□ 0.12
SNX17-202ENST00000427123 ZNF98A6NK75 572 aa15.77■□□□□ 0.12
SNX17-202ENST00000427123 CXCL1P09341 107 aa15.77■□□□□ 0.12
SNX17-202ENST00000427123 CT45A6P0DMU7 189 aa15.77■□□□□ 0.12
SNX17-202ENST00000427123 CT45A5P0DMU8 189 aa15.77■□□□□ 0.12
SNX17-202ENST00000427123 CT45A7P0DMV0 189 aa15.77■□□□□ 0.12
SNX17-202ENST00000427123 NPY1RP25929 384 aa15.77■□□□□ 0.12
SNX17-202ENST00000427123 RPL31P62899 125 aaKnown RBP15.77■□□□□ 0.12
SNX17-202ENST00000427123 IQCF2Q8IXL9 164 aa15.77■□□□□ 0.12
SNX17-202ENST00000427123 ZCCHC24Q8N2G6 241 aaKnown RBP15.77■□□□□ 0.12
SNX17-202ENST00000427123 RND1Q92730 232 aa15.77■□□□□ 0.12
SNX17-202ENST00000427123 MGST2Q99735 147 aa15.77■□□□□ 0.12
SNX17-202ENST00000427123 SLC35D1Q9NTN3 355 aa15.77■□□□□ 0.12
SNX17-202ENST00000427123 MGAQ8IWI9 3026 aa15.77■□□□□ 0.11
SNX17-202ENST00000427123 IGHV2-5P01817 119 aa15.77■□□□□ 0.11
SNX17-202ENST00000427123 RND2P52198 227 aa15.77■□□□□ 0.11
SNX17-202ENST00000427123 ZNF833PQ6ZTB9 187 aa15.77■□□□□ 0.11
SNX17-202ENST00000427123 OR13D1Q8NGV5 346 aa15.77■□□□□ 0.11
SNX17-202ENST00000427123 ZNF714Q96N38 554 aa15.77■□□□□ 0.11
SNX17-202ENST00000427123 WFIKKN1Q96NZ8 548 aa15.77■□□□□ 0.11
SNX17-202ENST00000427123 GGTLC1Q9BX51 225 aa15.77■□□□□ 0.11
SNX17-202ENST00000427123 CTDSP1Q9GZU7 261 aa15.77■□□□□ 0.11
SNX17-202ENST00000427123 OR51B2Q9Y5P1 312 aa15.77■□□□□ 0.11
SNX17-202ENST00000427123 URGCP-MRPS24S4R325 110 aa15.77■□□□□ 0.11
SNX17-202ENST00000427123 CLDN34H7C241 214 aa15.76■□□□□ 0.11
SNX17-202ENST00000427123 IL6RP08887 468 aaPredicted RBP15.76■□□□□ 0.11
SNX17-202ENST00000427123 OR4F5Q8NH21 305 aa15.76■□□□□ 0.11
SNX17-202ENST00000427123 GATAD1Q8WUU5 269 aa15.76■□□□□ 0.11
SNX17-202ENST00000427123 OR4F4Q96R69 305 aa15.76■□□□□ 0.11
SNX17-202ENST00000427123 ZNF257Q9Y2Q1 563 aa15.76■□□□□ 0.11
SNX17-202ENST00000427123 TGIF2-C20orf24A0A0A6YYL0 155 aa15.75■□□□□ 0.11
SNX17-202ENST00000427123 TMEM241Q24JQ0 296 aa15.75■□□□□ 0.11
SNX17-202ENST00000427123 ZNF674Q2M3X9 581 aa15.75■□□□□ 0.11
SNX17-202ENST00000427123 C12orf57Q99622 126 aa15.75■□□□□ 0.11
SNX17-202ENST00000427123 TMEM106BQ9NUM4 274 aa15.75■□□□□ 0.11
SNX17-202ENST00000427123 PXMP4Q9Y6I8 212 aa15.75■□□□□ 0.11
SNX17-202ENST00000427123 ANKRD11Q6UB99 2663 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms