RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 HKR1P10072 659 aa12.18□□□□□ -0.46
GINS3-203ENST00000426538 CD1BP29016 333 aa12.18□□□□□ -0.46
GINS3-203ENST00000426538 VMA21Q3ZAQ7 101 aa12.18□□□□□ -0.46
GINS3-203ENST00000426538 ZNF429Q86V71 674 aa12.18□□□□□ -0.46
GINS3-203ENST00000426538 OR2C3Q8N628 320 aa12.18□□□□□ -0.46
GINS3-203ENST00000426538 GON7Q9BXV9 100 aa12.18□□□□□ -0.46
GINS3-203ENST00000426538 FKBP11Q9NYL4 201 aa12.18□□□□□ -0.46
GINS3-203ENST00000426538 NUP50Q9UKX7 468 aa12.18□□□□□ -0.46
GINS3-203ENST00000426538 PRNDQ9UKY0 176 aa12.18□□□□□ -0.46
GINS3-203ENST00000426538 ABCA2Q9BZC7 2435 aa12.18□□□□□ -0.46
GINS3-203ENST00000426538 MSGN1A6NI15 193 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 C15orf61A6NNL5 157 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 CEBPZOSA8MTT3 80 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 SAA4P35542 130 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 SPCS3P61009 180 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 OR52E5Q8NH55 327 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 TSNAXQ99598 290 aaKnown RBP12.17□□□□□ -0.46
GINS3-203ENST00000426538 RNF5Q99942 180 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 SLC25A31Q9H0C2 315 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 RBKSQ9H477 322 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 WSB1Q9Y6I7 421 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 FASNP49327 2511 aaKnown RBP12.17□□□□□ -0.46
GINS3-203ENST00000426538 UPK2O00526 184 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 KBTBD11O94819 623 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 IL6RP08887 468 aaPredicted RBP12.17□□□□□ -0.46
GINS3-203ENST00000426538 IAPPP10997 89 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 HES1Q14469 280 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 TMEM249Q2WGJ8 235 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 AARDQ4LEZ3 155 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 KRTAP1-3Q8IUG1 177 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 PUSL1Q8N0Z8 303 aaKnown RBP12.17□□□□□ -0.46
GINS3-203ENST00000426538 OR4A5Q8NH83 315 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 CIB3Q96Q77 187 aaPredicted RBP12.17□□□□□ -0.46
GINS3-203ENST00000426538 CLCC1Q96S66 551 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 ARPC5LQ9BPX5 153 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 C11orf1Q9H5F2 150 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 SLA2Q9H6Q3 261 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 LYRM2Q9NU23 88 aaPredicted RBP12.17□□□□□ -0.46
GINS3-203ENST00000426538 PSENENQ9NZ42 101 aa12.17□□□□□ -0.46
GINS3-203ENST00000426538 TRAV40A0A0B4J280 105 aa12.16□□□□□ -0.46
GINS3-203ENST00000426538 IGHV1-69DA0A0B4J2H0 117 aa12.16□□□□□ -0.46
GINS3-203ENST00000426538 FAM24AA6NFZ4 105 aa12.16□□□□□ -0.46
GINS3-203ENST00000426538 SLC25A17O43808 307 aa12.16□□□□□ -0.46
GINS3-203ENST00000426538 VENTXO95231 258 aa12.16□□□□□ -0.46
GINS3-203ENST00000426538 IGHV1-69P01742 117 aa12.16□□□□□ -0.46
GINS3-203ENST00000426538 PAX6P26367 422 aa12.16□□□□□ -0.46
GINS3-203ENST00000426538 TAS2R30P59541 319 aa12.16□□□□□ -0.46
GINS3-203ENST00000426538 HABP2Q14520 560 aaPredicted RBP12.16□□□□□ -0.46
GINS3-203ENST00000426538 DTD1Q8TEA8 209 aa12.16□□□□□ -0.46
GINS3-203ENST00000426538 CFHR4Q92496 578 aa12.16□□□□□ -0.46
GINS3-203ENST00000426538 RITA1Q96K30 269 aa12.16□□□□□ -0.46
GINS3-203ENST00000426538 SMIM8Q96KF7 97 aa12.16□□□□□ -0.46
GINS3-203ENST00000426538 TMEM14BQ9NUH8 114 aa12.16□□□□□ -0.46
GINS3-203ENST00000426538 FOXA2Q9Y261 457 aaPredicted RBP12.16□□□□□ -0.46
GINS3-203ENST00000426538 OR51B2Q9Y5P1 312 aa12.16□□□□□ -0.46
GINS3-203ENST00000426538 J3QLI3 93 aa12.15□□□□□ -0.46
GINS3-203ENST00000426538 BCL2L11O43521 198 aa12.15□□□□□ -0.46
GINS3-203ENST00000426538 LY86O95711 162 aa12.15□□□□□ -0.46
GINS3-203ENST00000426538 MOSP00540 346 aa12.15□□□□□ -0.46
GINS3-203ENST00000426538 IGKV1D-33P01593 117 aa12.15□□□□□ -0.46
GINS3-203ENST00000426538 IGKV1-33P01594 117 aa12.15□□□□□ -0.46
GINS3-203ENST00000426538 IGLV2-23P01705 113 aa12.15□□□□□ -0.46
GINS3-203ENST00000426538 BRS3P32247 399 aa12.15□□□□□ -0.46
GINS3-203ENST00000426538 PAX9P55771 341 aa12.15□□□□□ -0.46
GINS3-203ENST00000426538 HSPE1P61604 102 aaKnown RBP12.15□□□□□ -0.46
GINS3-203ENST00000426538 DYNAPQ8N1N2 210 aa12.15□□□□□ -0.46
GINS3-203ENST00000426538 PIP4P2Q8N4L2 257 aa12.15□□□□□ -0.46
GINS3-203ENST00000426538 TEX45Q8NA69 505 aa12.15□□□□□ -0.46
GINS3-203ENST00000426538 C17orf50Q8WW18 174 aa12.15□□□□□ -0.46
GINS3-203ENST00000426538 FOXC2Q99958 501 aa12.15□□□□□ -0.46
GINS3-203ENST00000426538 COMMD5Q9GZQ3 224 aa12.15□□□□□ -0.46
GINS3-203ENST00000426538 IGHV3OR16-10A0A075B7F0 116 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 H3BP45 60 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 TAAR5O14804 337 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 TMEM50AO95807 157 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 FGF2P09038 288 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 IGHV4-31P0DP07 118 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 RPL8P62917 257 aaKnown RBP12.14□□□□□ -0.47
GINS3-203ENST00000426538 HNF4GQ14541 408 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 SPINK9Q5DT21 86 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 SLC51BQ86UW2 128 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 TMEM252Q8N6L7 170 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 WFDC11Q8NEX6 87 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 OR2T10Q8NGZ9 312 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 TMEM167AQ8TBQ9 72 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 ZDHHC16Q969W1 377 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 ZNF471Q9BX82 626 aaPredicted RBP12.14□□□□□ -0.47
GINS3-203ENST00000426538 HIPK2Q9H2X6 1198 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 ENY2Q9NPA8 101 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 ZNF257Q9Y2Q1 563 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 SNRNP70P08621 437 aaKnown RBP12.14□□□□□ -0.47
GINS3-203ENST00000426538 CD24P25063 80 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 IFITM2Q01629 132 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 EWSR1Q01844 656 aaKnown RBP eCLIP12.14□□□□□ -0.47
GINS3-203ENST00000426538 NHLH2Q02577 135 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 PSG5Q15238 335 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 PDLIM3Q53GG5 364 aaPredicted RBP12.14□□□□□ -0.47
GINS3-203ENST00000426538 SPANXN5Q5MJ07 72 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 CYB5R2Q6BCY4 276 aa12.14□□□□□ -0.47
GINS3-203ENST00000426538 STX12Q86Y82 276 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms