RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 ENSAO43768 121 aaKnown RBP7.72□□□□□ -1.17
HMGB4-201ENST00000425537 TSPAN15O95858 294 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 HBE1P02100 147 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 METTL15P1P0C7V9 234 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 ZP3P21754 424 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 USF1P22415 310 aaPredicted RBP7.72□□□□□ -1.17
HMGB4-201ENST00000425537 HOXA1P49639 335 aaPredicted RBP7.72□□□□□ -1.17
HMGB4-201ENST00000425537 HSPE1P61604 102 aaKnown RBP7.72□□□□□ -1.17
HMGB4-201ENST00000425537 SERF2P84101 59 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 RELBQ01201 579 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 TMEM267Q0VDI3 215 aaPredicted RBP7.72□□□□□ -1.17
HMGB4-201ENST00000425537 PJVKQ0ZLH3 352 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 VMA21Q3ZAQ7 101 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 TOR2AQ5JU69 321 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 PXDC1Q5TGL8 231 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 OR4A47Q6IF82 309 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 CLEC9AQ6UXN8 241 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 SSX9Q7RTT3 188 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 ZNF709Q8N972 641 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 OR5B3Q8NH48 314 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 GGACTQ9BVM4 153 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 QTRT1Q9BXR0 403 aaKnown RBP7.72□□□□□ -1.17
HMGB4-201ENST00000425537 MRPL20Q9BYC9 149 aaKnown RBP7.72□□□□□ -1.17
HMGB4-201ENST00000425537 REG4Q9BYZ8 158 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 BARX1Q9HBU1 254 aaPredicted RBP7.72□□□□□ -1.17
HMGB4-201ENST00000425537 ONECUT1Q9UBC0 465 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 FBXO7Q9Y3I1 522 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 TIMM9Q9Y5J7 89 aa7.72□□□□□ -1.17
HMGB4-201ENST00000425537 YLPM1P49750 1951 aaKnown RBP7.71□□□□□ -1.17
HMGB4-201ENST00000425537 BAHCC1Q9P281 2608 aa7.71□□□□□ -1.17
HMGB4-201ENST00000425537 PKDREJQ9NTG1 2253 aa7.71□□□□□ -1.17
HMGB4-201ENST00000425537 ROS1P08922 2347 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 IGHV2-26A0A0B4J1V2 119 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 C17orf112F2Z3M2 114 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 H0YJW9 148 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 UPK2O00526 184 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 MPDU1O75352 247 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 FCN3O75636 299 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 TSPAN9O75954 239 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 KBTBD11O94819 623 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 IFNA10P01566 189 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 MBP02144 154 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 OR9G9P0C7N8 305 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 ATP6V0CP27449 155 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 PDLIM4P50479 330 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 RPS16P62249 146 aaKnown RBP7.71□□□□□ -1.18
HMGB4-201ENST00000425537 LRRC75BQ2VPJ9 315 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 HLA-DRB5Q30154 266 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 OR8G2PQ6IF36 304 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 Q6ZRG5 221 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 CCDC28AQ8IWP9 274 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 ZNF525Q8N782 197 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 ST6GALNAC6Q969X2 333 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 BSCL2Q96G97 398 aaPredicted RBP7.71□□□□□ -1.18
HMGB4-201ENST00000425537 HARBI1Q96MB7 349 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 RNF5Q99942 180 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 NABP2Q9BQ15 211 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 PBDC1Q9BVG4 233 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 KCNIP2Q9NS61 270 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 TMEM14BQ9NUH8 114 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 UQCC1Q9NVA1 299 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 TCF19Q9Y242 345 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 OR51B2Q9Y5P1 312 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 USF3Q68DE3 2245 aa7.71□□□□□ -1.18
HMGB4-201ENST00000425537 DOPEY1Q5JWR5 2465 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 ARID1AO14497 2285 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 A0A1W2PN81 502 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 OVOL3O00110 214 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 ARG1P05089 322 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 CHRNA7P36544 502 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 LINC00205P59089 165 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 OR2B8PP59922 312 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 ZNF616Q08AN1 781 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 BTNL8Q6UX41 500 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 TMEM182Q6ZP80 229 aaPredicted RBP7.7□□□□□ -1.18
HMGB4-201ENST00000425537 THNSL2Q86YJ6 484 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 ZNF295-AS1Q8N0V1 137 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 OR1L8Q8NGR8 309 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 FAM213BQ8TBF2 198 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 NRGNQ92686 78 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 RPEQ96AT9 228 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 COMMD5Q9GZQ3 224 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 MS4A7Q9GZW8 240 aaPredicted RBP7.7□□□□□ -1.18
HMGB4-201ENST00000425537 HRH4Q9H3N8 390 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 PLEKHA3Q9HB20 300 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 INSIG2Q9Y5U4 225 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 KPTNQ9Y664 436 aa7.7□□□□□ -1.18
HMGB4-201ENST00000425537 LRRK2Q5S007 2527 aa7.69□□□□□ -1.18
HMGB4-201ENST00000425537 OOSP1A8MZH6 123 aa7.69□□□□□ -1.18
HMGB4-201ENST00000425537 FNDC10F2Z333 226 aa7.69□□□□□ -1.18
HMGB4-201ENST00000425537 BUB1B-PAK6H3BSN5 160 aa7.69□□□□□ -1.18
HMGB4-201ENST00000425537 NDUFS8O00217 210 aa7.69□□□□□ -1.18
HMGB4-201ENST00000425537 IGLV1-47P01700 117 aa7.69□□□□□ -1.18
HMGB4-201ENST00000425537 IL6RP08887 468 aaPredicted RBP7.69□□□□□ -1.18
HMGB4-201ENST00000425537 PRTN3P24158 256 aa7.69□□□□□ -1.18
HMGB4-201ENST00000425537 HTR1DP28221 377 aa7.69□□□□□ -1.18
HMGB4-201ENST00000425537 MAS1LP35410 378 aa7.69□□□□□ -1.18
HMGB4-201ENST00000425537 CDKN1AP38936 164 aa7.69□□□□□ -1.18
HMGB4-201ENST00000425537 VDAC2P45880 294 aaPredicted RBP7.69□□□□□ -1.18
HMGB4-201ENST00000425537 SUB1P53999 127 aaKnown RBP eCLIP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms