RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 RAB6AP20340 208 aa9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 PSMB6P28072 239 aa9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 CLDN12P56749 244 aa9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 ZNF45Q02386 682 aa9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 HES5Q5TA89 166 aa9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 Q6ZS49 121 aa9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 LYG2Q86SG7 212 aa9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 TMEM61Q8N0U2 210 aa9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 OR4A5Q8NH83 315 aa9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 TCTEX1D2Q8WW35 142 aa9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 WFDC10AQ9H1F0 79 aa9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 ATG5Q9H1Y0 275 aa9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 DCSTAMPQ9H295 470 aa9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 FKBP14Q9NWM8 211 aa9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 KIR2DL5BA0A0G2JN68 375 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 KIR2DL5BA0A0G2JPC4 375 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 A0A0J9YWU9 116 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 TMEM272A0A1B0GTI8 110 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 LINC00473A8K010 186 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 A8MWP6 167 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 KBTBD11O94819 623 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 IGHV3-23P01764 117 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 DTYMKP23919 212 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 ARPC4P59998 168 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 RPL8P62917 257 aaKnown RBP9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 BTNL8Q6UX41 500 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 ZNF66Q6ZN08 573 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 KIR2DL5AQ8N109 375 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 KIR2DL5BQ8NHK3 375 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 TMEM167AQ8TBQ9 72 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 SPAG8Q99932 426 aaPredicted RBP9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 COMMD5Q9GZQ3 224 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 MFFQ9GZY8 342 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 HRASLSQ9HDD0 168 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 SPATA2Q9UM82 520 aa9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 RBMX2Q9Y388 322 aaKnown RBP9.19□□□□□ -0.94
HLA-DQB3-203ENST00000425319 OR4C46A6NHA9 309 aa9.18□□□□□ -0.94
HLA-DQB3-203ENST00000425319 CASQ2O14958 399 aaPredicted RBP9.18□□□□□ -0.94
HLA-DQB3-203ENST00000425319 CRYGCP07315 174 aa9.18□□□□□ -0.94
HLA-DQB3-203ENST00000425319 GNAO1P09471 354 aa9.18□□□□□ -0.94
HLA-DQB3-203ENST00000425319 MLLT11Q13015 90 aaPredicted RBP9.18□□□□□ -0.94
HLA-DQB3-203ENST00000425319 CDNFQ49AH0 187 aa9.18□□□□□ -0.94
HLA-DQB3-203ENST00000425319 OR2B11Q5JQS5 317 aa9.18□□□□□ -0.94
HLA-DQB3-203ENST00000425319 CNIH2Q6PI25 160 aa9.18□□□□□ -0.94
HLA-DQB3-203ENST00000425319 MFSD4AQ8N468 514 aa9.18□□□□□ -0.94
HLA-DQB3-203ENST00000425319 FBLIM1Q8WUP2 373 aa9.18□□□□□ -0.94
HLA-DQB3-203ENST00000425319 MAFIPQ8WZ33 124 aa9.18□□□□□ -0.94
HLA-DQB3-203ENST00000425319 GALNT14Q96FL9 552 aa9.18□□□□□ -0.94
HLA-DQB3-203ENST00000425319 C5orf66Q9H5L9 145 aa9.18□□□□□ -0.94
HLA-DQB3-203ENST00000425319 RYR2Q92736 4967 aa9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 RGS10O43665 173 aa9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 RBMXL2O75526 392 aaKnown RBP9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 HLA-DQB1P01920 261 aa9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 ZNF735P0CB33 412 aa9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 RAB3BP20337 219 aa9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 CATR1Q13166 79 aa9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 MRGPRG-AS1Q2M3A8 158 aa9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 C10orf55Q5SWW7 151 aa9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 TMEM91Q6ZNR0 172 aa9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 CACNG8Q8WXS5 425 aa9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 BORCS5Q969J3 196 aa9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 CMTM3Q96MX0 182 aa9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 MGLLQ99685 303 aa9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 SRSF8Q9BRL6 282 aaKnown RBP9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 MLXQ9UH92 298 aa9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 KCNK7Q9Y2U2 307 aa9.17□□□□□ -0.94
HLA-DQB3-203ENST00000425319 TRAV1-2A0A0B4J238 106 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 TMEM213A2RRL7 107 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 IFITM5A6NNB3 132 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 RAB27BO00194 218 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 MFNGO00587 321 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 IL6RP08887 468 aaPredicted RBP9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 CTRB1P17538 263 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 HLA-GP17693 338 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 NFYAP23511 347 aaPredicted RBP9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 PTBP1P26599 531 aaKnown RBP eCLIP9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 TCTAP57738 103 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 GNG2P59768 71 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 RPS25P62851 125 aaKnown RBP9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 LGALS9CQ6DKI2 356 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 CTRB2Q6GPI1 263 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 THOC7Q6I9Y2 204 aaKnown RBP9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 SSX9Q7RTT3 188 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 HSD17B13Q7Z5P4 300 aaPredicted RBP9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 VKORC1L1Q8N0U8 176 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 ZBTB34Q8NCN2 500 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 CD300LFQ8TDQ1 290 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 RNF183Q96D59 192 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 LSM2Q9Y333 95 aaKnown RBP9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 S4R3C0 116 aa9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 HUWE1Q7Z6Z7 4374 aaKnown RBP9.16□□□□□ -0.94
HLA-DQB3-203ENST00000425319 BIRC6Q9NR09 4857 aa9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 TEX22C9J3V5 150 aa9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 TSPAN4O14817 238 aa9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 C8orf88P0DMB2 117 aa9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 GPR183P32249 361 aa9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 PAFAH1B2P68402 229 aa9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 DEFB135Q30KP9 77 aa9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 HACD4Q5VWC8 232 aa9.15□□□□□ -0.94
HLA-DQB3-203ENST00000425319 LAIR2Q6ISS4 152 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms