RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 C1QL4Q86Z23 238 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 WFDC8Q8IUA0 241 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 VKORC1L1Q8N0U8 176 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 GATAD1Q8WUU5 269 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 SMIM7Q9BQ49 75 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 QTRT1Q9BXR0 403 aaKnown RBP8.85□□□□□ -0.99
CUX1-205ENST00000425244 SLC25A15Q9Y619 301 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 FLNCQ14315 2725 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 SMCO3A2RU48 225 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 TMEM8BA6NDV4 472 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 IFNL4K9M1U5 179 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 M0R1X1 148 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 RAB29O14966 203 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 SPRY3O43610 288 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 TRGC2P03986 189 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 PKIAP61925 76 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 USF2Q15853 346 aaPredicted RBP8.85□□□□□ -0.99
CUX1-205ENST00000425244 C4orf17Q53FE4 359 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 SPRNQ5BIV9 151 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 ZNRF1Q8ND25 227 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 R3HDM4Q96D70 268 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 HSD17B10Q99714 261 aaKnown RBP8.85□□□□□ -0.99
CUX1-205ENST00000425244 VKORC1Q9BQB6 163 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 GAB2Q9UQC2 676 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 PKDREJQ9NTG1 2253 aa8.85□□□□□ -0.99
CUX1-205ENST00000425244 IGKV1D-17A0A075B6S4 117 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 C15orf65H3BRN8 121 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 IGLV1-44P01699 117 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 MDKP21741 143 aaPredicted RBP8.84□□□□□ -0.99
CUX1-205ENST00000425244 CCKARP32238 428 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 MEF2BQ02080 365 aaPredicted RBP8.84□□□□□ -0.99
CUX1-205ENST00000425244 RPL39P5Q59GN2 51 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 PDZD11Q5EBL8 140 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 TIMM23BQ5SRD1 257 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 ZNF66Q6ZN08 573 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 MOGAT3Q86VF5 341 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 C1orf87Q8N0U7 546 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 ST6GALNAC3Q8NDV1 305 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 LEAP2Q969E1 77 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 FAM210BQ96KR6 192 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 CIB3Q96Q77 187 aaPredicted RBP8.84□□□□□ -0.99
CUX1-205ENST00000425244 AGMATQ9BSE5 352 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 DOK5Q9P104 306 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 UTP20O75691 2785 aaKnown RBP8.84□□□□□ -0.99
CUX1-205ENST00000425244 B4DEV8 164 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 C16orf97H3BN30 126 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 OR9G9P0C7N8 305 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 CD81P60033 236 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 PNRC1Q12796 327 aaPredicted RBP8.84□□□□□ -0.99
CUX1-205ENST00000425244 FAM201AQ5SY85 155 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 PRAMEF5Q5TYX0 476 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 MBNL2Q5VZF2 373 aaKnown RBP8.84□□□□□ -0.99
CUX1-205ENST00000425244 SPNS3Q6ZMD2 512 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 NECAP1Q8NC96 275 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 OR4F5Q8NH21 305 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 OR2V2Q96R30 315 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 OR4F4Q96R69 305 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 NPCDR1Q9BY65 106 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 PARD6GQ9BYG4 376 aaPredicted RBP8.84□□□□□ -0.99
CUX1-205ENST00000425244 SDF2L1Q9HCN8 221 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 TIMM9Q9Y5J7 89 aa8.84□□□□□ -0.99
CUX1-205ENST00000425244 CLDN34H7C241 214 aa8.84□□□□□ -1
CUX1-205ENST00000425244 CYB5R3P00387 301 aaPredicted RBP8.84□□□□□ -1
CUX1-205ENST00000425244 CA7P43166 264 aa8.84□□□□□ -1
CUX1-205ENST00000425244 PSMB3P49720 205 aa8.84□□□□□ -1
CUX1-205ENST00000425244 ATP6V1FQ16864 119 aa8.84□□□□□ -1
CUX1-205ENST00000425244 P2RX4Q99571 388 aa8.84□□□□□ -1
CUX1-205ENST00000425244 LAMP3Q9UQV4 416 aa8.84□□□□□ -1
CUX1-205ENST00000425244 CRYBG3Q68DQ2 2970 aa8.83□□□□□ -1
CUX1-205ENST00000425244 MYO18BQ8IUG5 2567 aa8.83□□□□□ -1
CUX1-205ENST00000425244 CTXND1A0A1B0GTU2 59 aa8.83□□□□□ -1
CUX1-205ENST00000425244 PMS2P5A8MQ11 134 aa8.83□□□□□ -1
CUX1-205ENST00000425244 TSTD3H0UI37 97 aa8.83□□□□□ -1
CUX1-205ENST00000425244 CRYAAP02489 173 aa8.83□□□□□ -1
CUX1-205ENST00000425244 ADH4P08319 380 aa8.83□□□□□ -1
CUX1-205ENST00000425244 PAX1P15863 534 aa8.83□□□□□ -1
CUX1-205ENST00000425244 TUBG1P23258 451 aa8.83□□□□□ -1
CUX1-205ENST00000425244 UQCRFS1P47985 274 aa8.83□□□□□ -1
CUX1-205ENST00000425244 MZT1Q08AG7 82 aa8.83□□□□□ -1
CUX1-205ENST00000425244 RAB24Q969Q5 203 aa8.83□□□□□ -1
CUX1-205ENST00000425244 ACTR3CQ9C0K3 210 aaPredicted RBP8.83□□□□□ -1
CUX1-205ENST00000425244 HIST1H2BKO60814 126 aa8.83□□□□□ -1
CUX1-205ENST00000425244 HIST1H2BJP06899 126 aa8.83□□□□□ -1
CUX1-205ENST00000425244 HIST1H2BOP23527 126 aa8.83□□□□□ -1
CUX1-205ENST00000425244 GRNP28799 593 aaKnown RBP8.83□□□□□ -1
CUX1-205ENST00000425244 DUTP33316 252 aaKnown RBP8.83□□□□□ -1
CUX1-205ENST00000425244 HIST1H2BBP33778 126 aa8.83□□□□□ -1
CUX1-205ENST00000425244 HIST1H2BDP58876 126 aa8.83□□□□□ -1
CUX1-205ENST00000425244 HIST1H2BCP62807 126 aa8.83□□□□□ -1
CUX1-205ENST00000425244 NKX6-1P78426 367 aaPredicted RBP8.83□□□□□ -1
CUX1-205ENST00000425244 CDSNQ15517 529 aa8.83□□□□□ -1
CUX1-205ENST00000425244 HIST2H2BEQ16778 126 aa8.83□□□□□ -1
CUX1-205ENST00000425244 GCSAMLQ5JQS6 135 aa8.83□□□□□ -1
CUX1-205ENST00000425244 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.83□□□□□ -1
CUX1-205ENST00000425244 WDR25Q64LD2 544 aaPredicted RBP8.83□□□□□ -1
CUX1-205ENST00000425244 OR5T1Q8NG75 326 aa8.83□□□□□ -1
CUX1-205ENST00000425244 OR4A16Q8NH70 328 aa8.83□□□□□ -1
CUX1-205ENST00000425244 HIST1H2BHQ93079 126 aa8.83□□□□□ -1
CUX1-205ENST00000425244 HIST1H2BNQ99877 126 aa8.83□□□□□ -1
CUX1-205ENST00000425244 HIST1H2BMQ99879 126 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms