RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 MMD2Q8IY49 270 aa17■□□□□ 0.31
SEC22C-207ENST00000423701 SGMS2Q8NHU3 365 aa17■□□□□ 0.31
SEC22C-207ENST00000423701 TMEM167AQ8TBQ9 72 aa17■□□□□ 0.31
SEC22C-207ENST00000423701 TP53RKQ96S44 253 aa17■□□□□ 0.31
SEC22C-207ENST00000423701 VSIG4Q9Y279 399 aa17■□□□□ 0.31
SEC22C-207ENST00000423701 MARCH11A6NNE9 402 aa16.99■□□□□ 0.31
SEC22C-207ENST00000423701 PPIFP30405 207 aaKnown RBP16.99■□□□□ 0.31
SEC22C-207ENST00000423701 C19orf54Q5BKX5 351 aa16.99■□□□□ 0.31
SEC22C-207ENST00000423701 DMBX1Q8NFW5 382 aa16.99■□□□□ 0.31
SEC22C-207ENST00000423701 CCDC32Q9BV29 185 aa16.99■□□□□ 0.31
SEC22C-207ENST00000423701 BET1LQ9NYM9 111 aa16.99■□□□□ 0.31
SEC22C-207ENST00000423701 TET2Q6N021 2002 aaPredicted RBP16.99■□□□□ 0.31
SEC22C-207ENST00000423701 C3orf85A0A1B0GTC6 90 aa16.99■□□□□ 0.31
SEC22C-207ENST00000423701 LINC00854A0A1B0GVQ3 168 aa16.99■□□□□ 0.31
SEC22C-207ENST00000423701 RPA2P15927 270 aa16.99■□□□□ 0.31
SEC22C-207ENST00000423701 ERVK-16P61578 105 aa16.99■□□□□ 0.31
SEC22C-207ENST00000423701 TEX38Q6PEX7 206 aa16.99■□□□□ 0.31
SEC22C-207ENST00000423701 COMMD1Q8N668 190 aa16.99■□□□□ 0.31
SEC22C-207ENST00000423701 LFNGQ8NES3 379 aa16.99■□□□□ 0.31
SEC22C-207ENST00000423701 SCGB3A2Q96PL1 93 aa16.99■□□□□ 0.31
SEC22C-207ENST00000423701 TMEM140Q9NV12 185 aa16.99■□□□□ 0.31
SEC22C-207ENST00000423701 NUBP2Q9Y5Y2 271 aa16.99■□□□□ 0.31
SEC22C-207ENST00000423701 ACTL6BO94805 426 aa16.98■□□□□ 0.31
SEC22C-207ENST00000423701 KRASP01116 189 aa16.98■□□□□ 0.31
SEC22C-207ENST00000423701 IGKV1-39P01597 117 aa16.98■□□□□ 0.31
SEC22C-207ENST00000423701 IGHG4P01861 327 aa16.98■□□□□ 0.31
SEC22C-207ENST00000423701 IGKV1D-39P04432 117 aa16.98■□□□□ 0.31
SEC22C-207ENST00000423701 SERPINE2P07093 398 aa16.98■□□□□ 0.31
SEC22C-207ENST00000423701 G6PCP35575 357 aa16.98■□□□□ 0.31
SEC22C-207ENST00000423701 C10orf55Q5SWW7 151 aa16.98■□□□□ 0.31
SEC22C-207ENST00000423701 MINDY2Q8NBR6 621 aa16.98■□□□□ 0.31
SEC22C-207ENST00000423701 OR4A5Q8NH83 315 aa16.98■□□□□ 0.31
SEC22C-207ENST00000423701 SRSF12Q8WXF0 261 aaKnown RBP16.98■□□□□ 0.31
SEC22C-207ENST00000423701 NAP1L6A6NFF2 107 aa16.97■□□□□ 0.31
SEC22C-207ENST00000423701 IL6RP08887 468 aaPredicted RBP16.97■□□□□ 0.31
SEC22C-207ENST00000423701 CD40LGP29965 261 aa16.97■□□□□ 0.31
SEC22C-207ENST00000423701 TMEM267Q0VDI3 215 aaPredicted RBP16.97■□□□□ 0.31
SEC22C-207ENST00000423701 SP6Q3SY56 376 aa16.97■□□□□ 0.31
SEC22C-207ENST00000423701 UNQ5815/PRO19632Q6UWF5 114 aa16.97■□□□□ 0.31
SEC22C-207ENST00000423701 NDUFA11Q86Y39 141 aa16.97■□□□□ 0.31
SEC22C-207ENST00000423701 ADAD2Q8NCV1 583 aaKnown RBP16.97■□□□□ 0.31
SEC22C-207ENST00000423701 TMEM230Q96A57 120 aa16.97■□□□□ 0.31
SEC22C-207ENST00000423701 WDR12Q9GZL7 423 aaKnown RBP16.97■□□□□ 0.31
SEC22C-207ENST00000423701 NAA60Q9H7X0 242 aa16.97■□□□□ 0.31
SEC22C-207ENST00000423701 TRAV3A0A0B4J244 114 aa16.96■□□□□ 0.31
SEC22C-207ENST00000423701 TEX13DA0A0J9YY54 714 aaPredicted RBP16.96■□□□□ 0.31
SEC22C-207ENST00000423701 A0A1W2PN81 502 aa16.96■□□□□ 0.31
SEC22C-207ENST00000423701 TCRBV4S1A1TA0A5B7 111 aa16.96■□□□□ 0.31
SEC22C-207ENST00000423701 CRYM-AS1A6NIL9 109 aa16.96■□□□□ 0.31
SEC22C-207ENST00000423701 ADARB2-AS1A8MUL3 147 aa16.96■□□□□ 0.31
SEC22C-207ENST00000423701 SOX15O60248 233 aa16.96■□□□□ 0.31
SEC22C-207ENST00000423701 CHRNA7P36544 502 aa16.96■□□□□ 0.31
SEC22C-207ENST00000423701 CCR6P51684 374 aa16.96■□□□□ 0.31
SEC22C-207ENST00000423701 RPL8P62917 257 aaKnown RBP16.96■□□□□ 0.31
SEC22C-207ENST00000423701 FOXE3Q13461 319 aa16.96■□□□□ 0.31
SEC22C-207ENST00000423701 AKIRIN2Q53H80 203 aa16.96■□□□□ 0.31
SEC22C-207ENST00000423701 KHDC1LQ5JSQ8 128 aa16.96■□□□□ 0.31
SEC22C-207ENST00000423701 LCNL1Q6ZST4 164 aa16.96■□□□□ 0.31
SEC22C-207ENST00000423701 SLC25A21Q9BQT8 299 aaPredicted RBP16.96■□□□□ 0.31
SEC22C-207ENST00000423701 FOXA2Q9Y261 457 aaPredicted RBP16.96■□□□□ 0.31
SEC22C-207ENST00000423701 UPK2O00526 184 aa16.95■□□□□ 0.3
SEC22C-207ENST00000423701 B3GALNT1O75752 331 aa16.95■□□□□ 0.3
SEC22C-207ENST00000423701 IGLV1-40P01703 118 aa16.95■□□□□ 0.3
SEC22C-207ENST00000423701 OPN1MWP04001 364 aa16.95■□□□□ 0.3
SEC22C-207ENST00000423701 ELANEP08246 267 aa16.95■□□□□ 0.3
SEC22C-207ENST00000423701 OR5AC1P0C628 307 aa16.95■□□□□ 0.3
SEC22C-207ENST00000423701 OPN1MW2P0DN77 364 aa16.95■□□□□ 0.3
SEC22C-207ENST00000423701 OPN1MW3P0DN78 364 aa16.95■□□□□ 0.3
SEC22C-207ENST00000423701 UCP1P25874 307 aa16.95■□□□□ 0.3
SEC22C-207ENST00000423701 PSMB8P28062 276 aa16.95■□□□□ 0.3
SEC22C-207ENST00000423701 ZNF846Q147U1 533 aa16.95■□□□□ 0.3
SEC22C-207ENST00000423701 NSUN5P1Q3KNT7 163 aa16.95■□□□□ 0.3
SEC22C-207ENST00000423701 RNF152Q8N8N0 203 aa16.95■□□□□ 0.3
SEC22C-207ENST00000423701 SEC22AQ96IW7 307 aa16.95■□□□□ 0.3
SEC22C-207ENST00000423701 C7orf50Q9BRJ6 194 aaKnown RBP16.95■□□□□ 0.3
SEC22C-207ENST00000423701 TSSC4Q9Y5U2 329 aaPredicted RBP16.95■□□□□ 0.3
SEC22C-207ENST00000423701 A0A1W2PRX2 142 aa16.94■□□□□ 0.3
SEC22C-207ENST00000423701 MSGN1A6NI15 193 aa16.94■□□□□ 0.3
SEC22C-207ENST00000423701 CENPXA8MT69 81 aa16.94■□□□□ 0.3
SEC22C-207ENST00000423701 M0QZ24 198 aa16.94■□□□□ 0.3
SEC22C-207ENST00000423701 HLA-GP17693 338 aa16.94■□□□□ 0.3
SEC22C-207ENST00000423701 BTCP35070 178 aa16.94■□□□□ 0.3
SEC22C-207ENST00000423701 MAS1LP35410 378 aa16.94■□□□□ 0.3
SEC22C-207ENST00000423701 RBMS2Q15434 407 aaKnown RBP16.94■□□□□ 0.3
SEC22C-207ENST00000423701 C2orf68Q2NKX9 166 aa16.94■□□□□ 0.3
SEC22C-207ENST00000423701 CXorf66Q5JRM2 361 aaPredicted RBP16.94■□□□□ 0.3
SEC22C-207ENST00000423701 ASPHD1Q5U4P2 390 aa16.94■□□□□ 0.3
SEC22C-207ENST00000423701 PHB2Q99623 299 aa16.94■□□□□ 0.3
SEC22C-207ENST00000423701 TNCP24821 2201 aa16.94■□□□□ 0.3
SEC22C-207ENST00000423701 PLA2G10O15496 165 aa16.93■□□□□ 0.3
SEC22C-207ENST00000423701 RPLP1P05386 114 aaKnown RBP16.93■□□□□ 0.3
SEC22C-207ENST00000423701 APELAP0DMC3 54 aa16.93■□□□□ 0.3
SEC22C-207ENST00000423701 MYOD1P15172 320 aa16.93■□□□□ 0.3
SEC22C-207ENST00000423701 TRIM16LQ309B1 348 aa16.93■□□□□ 0.3
SEC22C-207ENST00000423701 TMED4Q7Z7H5 227 aa16.93■□□□□ 0.3
SEC22C-207ENST00000423701 SGPP2Q8IWX5 399 aa16.93■□□□□ 0.3
SEC22C-207ENST00000423701 CADM3Q8N126 398 aa16.93■□□□□ 0.3
SEC22C-207ENST00000423701 TMEM222Q9H0R3 208 aa16.93■□□□□ 0.3
SEC22C-207ENST00000423701 E7EUB6 86 aa16.93■□□□□ 0.3
SEC22C-207ENST00000423701 TSPAN15O95858 294 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms