RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 LGI3Q8N145 548 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 CHPT1Q8WUD6 406 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 OR2A7Q96R45 310 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 FBN1P35555 2871 aaKnown RBP12.46□□□□□ -0.41
DDX55-203ENST00000421670 TRAV3A0A0B4J244 114 aa12.46□□□□□ -0.42
DDX55-203ENST00000421670 A0A0G2JRQ6 117 aa12.46□□□□□ -0.42
DDX55-203ENST00000421670 TRIM77I1YAP6 450 aa12.46□□□□□ -0.42
DDX55-203ENST00000421670 DHFRP00374 187 aa12.46□□□□□ -0.42
DDX55-203ENST00000421670 IL5P05113 134 aa12.46□□□□□ -0.42
DDX55-203ENST00000421670 SRPXP78539 464 aa12.46□□□□□ -0.42
DDX55-203ENST00000421670 TEX45Q8NA69 505 aa12.46□□□□□ -0.42
DDX55-203ENST00000421670 RNASE11Q8TAA1 199 aaKnown RBP12.46□□□□□ -0.42
DDX55-203ENST00000421670 VSTM2AQ8TAG5 236 aa12.46□□□□□ -0.42
DDX55-203ENST00000421670 ZNF431Q8TF32 576 aaPredicted RBP12.46□□□□□ -0.42
DDX55-203ENST00000421670 HSPB9Q9BQS6 159 aa12.46□□□□□ -0.42
DDX55-203ENST00000421670 AIFM2Q9BRQ8 373 aa12.46□□□□□ -0.42
DDX55-203ENST00000421670 NPFFR1Q9GZQ6 430 aa12.46□□□□□ -0.42
DDX55-203ENST00000421670 ZNF430Q9H8G1 570 aaPredicted RBP12.46□□□□□ -0.42
DDX55-203ENST00000421670 CA2P00918 260 aa12.45□□□□□ -0.42
DDX55-203ENST00000421670 OR9G9P0C7N8 305 aa12.45□□□□□ -0.42
DDX55-203ENST00000421670 GNB1P62873 340 aa12.45□□□□□ -0.42
DDX55-203ENST00000421670 RELBQ01201 579 aa12.45□□□□□ -0.42
DDX55-203ENST00000421670 TATDN3Q17R31 274 aa12.45□□□□□ -0.42
DDX55-203ENST00000421670 H2BFWTQ7Z2G1 175 aa12.45□□□□□ -0.42
DDX55-203ENST00000421670 LRTM2Q8N967 370 aa12.45□□□□□ -0.42
DDX55-203ENST00000421670 COQ8AQ8NI60 647 aa12.45□□□□□ -0.42
DDX55-203ENST00000421670 MITD1Q8WV92 249 aa12.45□□□□□ -0.42
DDX55-203ENST00000421670 IL22RA2Q969J5 263 aa12.45□□□□□ -0.42
DDX55-203ENST00000421670 PHB2Q99623 299 aa12.45□□□□□ -0.42
DDX55-203ENST00000421670 RANBP3Q9H6Z4 567 aaPredicted RBP12.45□□□□□ -0.42
DDX55-203ENST00000421670 BET1LQ9NYM9 111 aa12.45□□□□□ -0.42
DDX55-203ENST00000421670 NSG2Q9Y328 171 aa12.45□□□□□ -0.42
DDX55-203ENST00000421670 TENM1Q9UKZ4 2725 aa12.45□□□□□ -0.42
DDX55-203ENST00000421670 A0A0B4J2A0 478 aa12.44□□□□□ -0.42
DDX55-203ENST00000421670 CREBL2O60519 120 aaPredicted RBP12.44□□□□□ -0.42
DDX55-203ENST00000421670 PRAF2O60831 178 aa12.44□□□□□ -0.42
DDX55-203ENST00000421670 HLA-DRB1P01911 266 aa12.44□□□□□ -0.42
DDX55-203ENST00000421670 P0C879 139 aa12.44□□□□□ -0.42
DDX55-203ENST00000421670 OR2B8PP59922 312 aa12.44□□□□□ -0.42
DDX55-203ENST00000421670 SSBP2P81877 361 aaPredicted RBP12.44□□□□□ -0.42
DDX55-203ENST00000421670 PRSS8Q16651 343 aa12.44□□□□□ -0.42
DDX55-203ENST00000421670 TMEM95Q3KNT9 176 aa12.44□□□□□ -0.42
DDX55-203ENST00000421670 UXS1Q8NBZ7 420 aa12.44□□□□□ -0.42
DDX55-203ENST00000421670 TMEM167AQ8TBQ9 72 aa12.44□□□□□ -0.42
DDX55-203ENST00000421670 RRNAD1Q96FB5 475 aaKnown RBP12.44□□□□□ -0.42
DDX55-203ENST00000421670 ZNF702PQ9H963 129 aa12.44□□□□□ -0.42
DDX55-203ENST00000421670 SHPKQ9UHJ6 478 aa12.44□□□□□ -0.42
DDX55-203ENST00000421670 ADAP1O75689 374 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 ATG12O94817 140 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 CRYBA1P05813 215 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 HOXB5P09067 269 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 MYOD1P15172 320 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 RPL15P61313 204 aaKnown RBP12.43□□□□□ -0.42
DDX55-203ENST00000421670 NDPQ00604 133 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 TNXAQ16473 311 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 C10orf55Q5SWW7 151 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 Q6ZSV7 163 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 GPN1Q9HCN4 374 aaPredicted RBP12.43□□□□□ -0.42
DDX55-203ENST00000421670 MMP24Q9Y5R2 645 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 ALG5Q9Y673 324 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 IGHV7-81A0A0B4J1V7 117 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 LINC01548A6NM66 108 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 DBX1A6NMT0 343 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 UPK2O00526 184 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 IL6RP08887 468 aaPredicted RBP12.43□□□□□ -0.42
DDX55-203ENST00000421670 VDAC1P21796 283 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 RPL8P62917 257 aaKnown RBP12.43□□□□□ -0.42
DDX55-203ENST00000421670 NMSQ5H8A3 153 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 MMD2Q8IY49 270 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 C12orf45Q8N5I9 185 aaPredicted RBP12.43□□□□□ -0.42
DDX55-203ENST00000421670 MINDY2Q8NBR6 621 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 GPR146Q96CH1 333 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 PRSS22Q9GZN4 317 aa12.43□□□□□ -0.42
DDX55-203ENST00000421670 C7orf66A4D0T2 115 aa12.42□□□□□ -0.42
DDX55-203ENST00000421670 SNRPGP15A8MWD9 76 aa12.42□□□□□ -0.42
DDX55-203ENST00000421670 CCSO14618 274 aa12.42□□□□□ -0.42
DDX55-203ENST00000421670 OPN1MWP04001 364 aa12.42□□□□□ -0.42
DDX55-203ENST00000421670 OPN1MW2P0DN77 364 aa12.42□□□□□ -0.42
DDX55-203ENST00000421670 OPN1MW3P0DN78 364 aa12.42□□□□□ -0.42
DDX55-203ENST00000421670 CX3CL1P78423 397 aa12.42□□□□□ -0.42
DDX55-203ENST00000421670 ARSJQ5FYB0 599 aaPredicted RBP12.42□□□□□ -0.42
DDX55-203ENST00000421670 Q6ZRM9 215 aa12.42□□□□□ -0.42
DDX55-203ENST00000421670 OR4A5Q8NH83 315 aa12.42□□□□□ -0.42
DDX55-203ENST00000421670 LSM10Q969L4 123 aaKnown RBP12.42□□□□□ -0.42
DDX55-203ENST00000421670 FAM103A1Q9BTL3 118 aaKnown RBP12.42□□□□□ -0.42
DDX55-203ENST00000421670 PARP11Q9NR21 331 aa12.42□□□□□ -0.42
DDX55-203ENST00000421670 CACNG5Q9UF02 275 aa12.42□□□□□ -0.42
DDX55-203ENST00000421670 FBXO7Q9Y3I1 522 aa12.42□□□□□ -0.42
DDX55-203ENST00000421670 DUXBA0A1W2PPF3 345 aa12.41□□□□□ -0.42
DDX55-203ENST00000421670 C15orf61A6NNL5 157 aa12.41□□□□□ -0.42
DDX55-203ENST00000421670 MPTX1A8MV57 137 aa12.41□□□□□ -0.42
DDX55-203ENST00000421670 RBMXL2O75526 392 aaKnown RBP12.41□□□□□ -0.42
DDX55-203ENST00000421670 SNAPC5O75971 98 aa12.41□□□□□ -0.42
DDX55-203ENST00000421670 ACTL6BO94805 426 aa12.41□□□□□ -0.42
DDX55-203ENST00000421670 CNIH1O95406 144 aa12.41□□□□□ -0.42
DDX55-203ENST00000421670 IGHG2P01859 326 aa12.41□□□□□ -0.42
DDX55-203ENST00000421670 HLA-GP17693 338 aa12.41□□□□□ -0.42
DDX55-203ENST00000421670 GGNBP1Q5YKI7 109 aa12.41□□□□□ -0.42
DDX55-203ENST00000421670 ZNF562Q6V9R5 426 aa12.41□□□□□ -0.42
DDX55-203ENST00000421670 SLC35E3Q7Z769 313 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms