RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 C1QL4Q86Z23 238 aa13.27□□□□□ -0.28
CTSB-203ENST00000420692 ELOVL5Q9NYP7 299 aa13.27□□□□□ -0.28
CTSB-203ENST00000420692 TCF19Q9Y242 345 aa13.27□□□□□ -0.28
CTSB-203ENST00000420692 TGIF2-C20orf24A0A0A6YYL0 155 aa13.27□□□□□ -0.29
CTSB-203ENST00000420692 UBE2CO00762 179 aa13.27□□□□□ -0.29
CTSB-203ENST00000420692 MBP02144 154 aa13.27□□□□□ -0.29
CTSB-203ENST00000420692 TNFSF4P23510 183 aa13.27□□□□□ -0.29
CTSB-203ENST00000420692 KIR2DS2P43631 304 aa13.27□□□□□ -0.29
CTSB-203ENST00000420692 GNG10P50151 68 aa13.27□□□□□ -0.29
CTSB-203ENST00000420692 ERVK-16P61578 105 aa13.27□□□□□ -0.29
CTSB-203ENST00000420692 MEF2BQ02080 365 aaPredicted RBP13.27□□□□□ -0.29
CTSB-203ENST00000420692 TBR1Q16650 682 aa13.27□□□□□ -0.29
CTSB-203ENST00000420692 OR4A47Q6IF82 309 aa13.27□□□□□ -0.29
CTSB-203ENST00000420692 SPACA3Q8IXA5 215 aa13.27□□□□□ -0.29
CTSB-203ENST00000420692 LYG1Q8N1E2 194 aa13.27□□□□□ -0.29
CTSB-203ENST00000420692 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.27□□□□□ -0.29
CTSB-203ENST00000420692 OR4S2Q8NH73 311 aa13.27□□□□□ -0.29
CTSB-203ENST00000420692 RHOVQ96L33 236 aa13.27□□□□□ -0.29
CTSB-203ENST00000420692 DIRC2Q96SL1 478 aa13.27□□□□□ -0.29
CTSB-203ENST00000420692 HEYLQ9NQ87 328 aaPredicted RBP13.27□□□□□ -0.29
CTSB-203ENST00000420692 C17orf100A8MU93 164 aa13.26□□□□□ -0.29
CTSB-203ENST00000420692 IFNA10P01566 189 aa13.26□□□□□ -0.29
CTSB-203ENST00000420692 TREML4Q6UXN2 200 aa13.26□□□□□ -0.29
CTSB-203ENST00000420692 GFRALQ6UXV0 394 aa13.26□□□□□ -0.29
CTSB-203ENST00000420692 SSX3Q99909 188 aa13.26□□□□□ -0.29
CTSB-203ENST00000420692 ACTR3CQ9C0K3 210 aaPredicted RBP13.26□□□□□ -0.29
CTSB-203ENST00000420692 SIRT7Q9NRC8 400 aa13.26□□□□□ -0.29
CTSB-203ENST00000420692 CXorf65A6NEN9 183 aa13.25□□□□□ -0.29
CTSB-203ENST00000420692 ZNF729A6NN14 1252 aaPredicted RBP13.25□□□□□ -0.29
CTSB-203ENST00000420692 C15orf61A6NNL5 157 aa13.25□□□□□ -0.29
CTSB-203ENST00000420692 YIF1AO95070 293 aa13.25□□□□□ -0.29
CTSB-203ENST00000420692 TMPRSS3P57727 454 aa13.25□□□□□ -0.29
CTSB-203ENST00000420692 RBMS3Q6XE24 437 aaKnown RBP13.25□□□□□ -0.29
CTSB-203ENST00000420692 C12orf57Q99622 126 aa13.25□□□□□ -0.29
CTSB-203ENST00000420692 RPUSD1Q9UJJ7 312 aaKnown RBP13.25□□□□□ -0.29
CTSB-203ENST00000420692 B4DEV8 164 aa13.25□□□□□ -0.29
CTSB-203ENST00000420692 IFNA1P01562 189 aa13.25□□□□□ -0.29
CTSB-203ENST00000420692 IL6RP08887 468 aaPredicted RBP13.25□□□□□ -0.29
CTSB-203ENST00000420692 CT45A6P0DMU7 189 aa13.25□□□□□ -0.29
CTSB-203ENST00000420692 CT45A5P0DMU8 189 aa13.25□□□□□ -0.29
CTSB-203ENST00000420692 CT45A7P0DMV0 189 aa13.25□□□□□ -0.29
CTSB-203ENST00000420692 THBS3P49746 956 aa13.25□□□□□ -0.29
CTSB-203ENST00000420692 ZNF709Q8N972 641 aa13.25□□□□□ -0.29
CTSB-203ENST00000420692 MS4A5Q9H3V2 200 aa13.25□□□□□ -0.29
CTSB-203ENST00000420692 TMEM14BQ9NUH8 114 aa13.25□□□□□ -0.29
CTSB-203ENST00000420692 TMPRSS2O15393 492 aa13.24□□□□□ -0.29
CTSB-203ENST00000420692 COL8A2P25067 703 aa13.24□□□□□ -0.29
CTSB-203ENST00000420692 RPS10P46783 165 aaKnown RBP13.24□□□□□ -0.29
CTSB-203ENST00000420692 SLC25A48Q6ZT89 311 aaKnown RBP13.24□□□□□ -0.29
CTSB-203ENST00000420692 MGST2Q99735 147 aa13.24□□□□□ -0.29
CTSB-203ENST00000420692 RELNP78509 3460 aa13.24□□□□□ -0.29
CTSB-203ENST00000420692 TRAV38-1A0A0B4J264 116 aa13.24□□□□□ -0.29
CTSB-203ENST00000420692 SRRM4A7MD48 611 aaKnown RBP13.24□□□□□ -0.29
CTSB-203ENST00000420692 SEC14L6B5MCN3 397 aa13.24□□□□□ -0.29
CTSB-203ENST00000420692 FABP9Q0Z7S8 132 aa13.24□□□□□ -0.29
CTSB-203ENST00000420692 PNRC1Q12796 327 aaPredicted RBP13.24□□□□□ -0.29
CTSB-203ENST00000420692 FOXC1Q12948 553 aa13.24□□□□□ -0.29
CTSB-203ENST00000420692 RAB9BQ9NP90 201 aa13.24□□□□□ -0.29
CTSB-203ENST00000420692 METTL1Q9UBP6 276 aaKnown RBP13.24□□□□□ -0.29
CTSB-203ENST00000420692 FOXA2Q9Y261 457 aaPredicted RBP13.24□□□□□ -0.29
CTSB-203ENST00000420692 ARFGEF3Q5TH69 2177 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 TRGV8A0A0C4DH27 118 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 LY86O95711 162 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 IGKV1-16P04430 117 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 IRF2P14316 349 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 NPPCP23582 126 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 RND2P52198 227 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 POU2AF1Q16633 256 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 WFIKKN1Q96NZ8 548 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 C17orf112F2Z3M2 114 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 TNFRSF13BO14836 293 aaPredicted RBP13.23□□□□□ -0.29
CTSB-203ENST00000420692 PAGE4O60829 102 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 S100A6P06703 90 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 NDUFB7P17568 137 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 PSMB3P49720 205 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 MEOX2P50222 304 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 HSPE1P61604 102 aaKnown RBP13.23□□□□□ -0.29
CTSB-203ENST00000420692 SMIM7Q9BQ49 75 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 TMEM242Q9NWH2 141 aa13.23□□□□□ -0.29
CTSB-203ENST00000420692 SMCO3A2RU48 225 aa13.22□□□□□ -0.29
CTSB-203ENST00000420692 PCP4L1A6NKN8 68 aa13.22□□□□□ -0.29
CTSB-203ENST00000420692 CYB5BO43169 146 aa13.22□□□□□ -0.29
CTSB-203ENST00000420692 TNFRSF1AP19438 455 aa13.22□□□□□ -0.29
CTSB-203ENST00000420692 CDC34P49427 236 aaPredicted RBP13.22□□□□□ -0.29
CTSB-203ENST00000420692 ACOT6Q3I5F7 207 aaPredicted RBP13.22□□□□□ -0.29
CTSB-203ENST00000420692 ARSJQ5FYB0 599 aaPredicted RBP13.22□□□□□ -0.29
CTSB-203ENST00000420692 NEUROG1Q92886 237 aa13.22□□□□□ -0.29
CTSB-203ENST00000420692 RPUSD4Q96CM3 377 aaKnown RBP13.22□□□□□ -0.29
CTSB-203ENST00000420692 GGACTQ9BVM4 153 aa13.22□□□□□ -0.29
CTSB-203ENST00000420692 SCNM1Q9BWG6 230 aa13.22□□□□□ -0.29
CTSB-203ENST00000420692 GGTLC1Q9BX51 225 aa13.22□□□□□ -0.29
CTSB-203ENST00000420692 PATZ1Q9HBE1 687 aaKnown RBP13.22□□□□□ -0.29
CTSB-203ENST00000420692 LSM4Q9Y4Z0 139 aaKnown RBP13.22□□□□□ -0.29
CTSB-203ENST00000420692 LINC00312Q9Y6C7 94 aa13.22□□□□□ -0.29
CTSB-203ENST00000420692 TMEM250H0YL14 139 aa13.21□□□□□ -0.29
CTSB-203ENST00000420692 KBTBD11O94819 623 aa13.21□□□□□ -0.29
CTSB-203ENST00000420692 CCL3L1P16619 93 aa13.21□□□□□ -0.29
CTSB-203ENST00000420692 RPP30P78346 268 aaKnown RBP13.21□□□□□ -0.29
CTSB-203ENST00000420692 CYP2G1PQ6ZSU1 146 aa13.21□□□□□ -0.29
CTSB-203ENST00000420692 ADTRPQ96IZ2 230 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms