RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 R3HDM4Q96D70 268 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 ZNF486Q96H40 463 aaPredicted RBP9.77□□□□□ -0.85
SKA1-203ENST00000417656 OR2A7Q96R45 310 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 SDHCQ99643 169 aaPredicted RBP9.77□□□□□ -0.85
SKA1-203ENST00000417656 PLEKHA2Q9HB19 425 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 HRASLSQ9HDD0 168 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 SLC2A8Q9NY64 477 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 COMMD9Q9P000 198 aa9.77□□□□□ -0.85
SKA1-203ENST00000417656 TSSC4Q9Y5U2 329 aaPredicted RBP9.77□□□□□ -0.85
SKA1-203ENST00000417656 SOX15O60248 233 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 RPLP1P05386 114 aaKnown RBP9.76□□□□□ -0.85
SKA1-203ENST00000417656 CTSDP07339 412 aaPredicted RBP9.76□□□□□ -0.85
SKA1-203ENST00000417656 APELAP0DMC3 54 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 NQO2P16083 231 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 FAUP35544 74 aaKnown RBP9.76□□□□□ -0.85
SKA1-203ENST00000417656 ECI1P42126 302 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 LPAR6P43657 344 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 ERVK-16P61578 105 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 FOXE3Q13461 319 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 BAK1Q16611 211 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 POU2AF1Q16633 256 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 ZNF585BQ52M93 769 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 CXorf66Q5JRM2 361 aaPredicted RBP9.76□□□□□ -0.85
SKA1-203ENST00000417656 TRIQKQ629K1 86 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 ZNF57Q68EA5 555 aaPredicted RBP9.76□□□□□ -0.85
SKA1-203ENST00000417656 OR4A47Q6IF82 309 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 C18orf65Q6ZTR6 163 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 MMD2Q8IY49 270 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 GDPD1Q8N9F7 314 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 CCDC71LQ8N9Z2 235 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 MINDY2Q8NBR6 621 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 LFNGQ8NES3 379 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 DMBX1Q8NFW5 382 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 TMEM167AQ8TBQ9 72 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 ZFAND1Q8TCF1 268 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 CASTOR1Q8WTX7 329 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 SRSF12Q8WXF0 261 aaKnown RBP9.76□□□□□ -0.85
SKA1-203ENST00000417656 BATF3Q9NR55 127 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 TMEM140Q9NV12 185 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 BET1LQ9NYM9 111 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 COPZ2Q9P299 210 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 FOXA2Q9Y261 457 aaPredicted RBP9.76□□□□□ -0.85
SKA1-203ENST00000417656 NUBP2Q9Y5Y2 271 aa9.76□□□□□ -0.85
SKA1-203ENST00000417656 MARCH11A6NNE9 402 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 MPPED1O15442 326 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 ACTL6BO94805 426 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 ELANEP08246 267 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 PF4V1P10720 104 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 MYOD1P15172 320 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 PSMB8P28062 276 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 SURF2Q15527 256 aaPredicted RBP9.75□□□□□ -0.85
SKA1-203ENST00000417656 ASPHD1Q5U4P2 390 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 TCTEX1D1Q8N7M0 179 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 RNF152Q8N8N0 203 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 KLHL30-AS1Q8NEE0 82 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 FAM110DQ8TAY7 271 aaPredicted RBP9.75□□□□□ -0.85
SKA1-203ENST00000417656 TP53RKQ96S44 253 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 PHB2Q99623 299 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 C5orf66Q9H5L9 145 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 AKIP1Q9NQ31 210 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 PTTG2Q9NZH5 202 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 SCP2D1Q9UJQ7 156 aa9.75□□□□□ -0.85
SKA1-203ENST00000417656 C14orf166Q9Y224 244 aaKnown RBP9.75□□□□□ -0.85
SKA1-203ENST00000417656 TNCP24821 2201 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 TRAV3A0A0B4J244 114 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 NUDT19A8MXV4 375 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 H0Y980 276 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 IGKV1-39P01597 117 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 IGLV1-40P01703 118 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 IGKV1D-39P04432 117 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 G6PCP35575 357 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 INPP1P49441 399 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 RPL8P62917 257 aaKnown RBP9.74□□□□□ -0.85
SKA1-203ENST00000417656 ZNF45Q02386 682 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 TMEM267Q0VDI3 215 aaPredicted RBP9.74□□□□□ -0.85
SKA1-203ENST00000417656 OR4F17Q8NGA8 305 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 OR4A5Q8NH83 315 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 MYOZ3Q8TDC0 251 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 OR4F4Q96R69 305 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 AIFM2Q9BRQ8 373 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 RTBDNQ9BSG5 229 aaPredicted RBP9.74□□□□□ -0.85
SKA1-203ENST00000417656 KLK15Q9H2R5 256 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 FAM212BQ9NTI7 297 aaPredicted RBP9.74□□□□□ -0.85
SKA1-203ENST00000417656 VSIG4Q9Y279 399 aa9.74□□□□□ -0.85
SKA1-203ENST00000417656 C3orf85A0A1B0GTC6 90 aa9.73□□□□□ -0.85
SKA1-203ENST00000417656 LINC00854A0A1B0GVQ3 168 aa9.73□□□□□ -0.85
SKA1-203ENST00000417656 MSGN1A6NI15 193 aa9.73□□□□□ -0.85
SKA1-203ENST00000417656 UPK2O00526 184 aa9.73□□□□□ -0.85
SKA1-203ENST00000417656 KRASP01116 189 aa9.73□□□□□ -0.85
SKA1-203ENST00000417656 IL7P13232 177 aa9.73□□□□□ -0.85
SKA1-203ENST00000417656 HLA-GP17693 338 aa9.73□□□□□ -0.85
SKA1-203ENST00000417656 RPL27AP46776 148 aaKnown RBP9.73□□□□□ -0.85
SKA1-203ENST00000417656 SP6Q3SY56 376 aa9.73□□□□□ -0.85
SKA1-203ENST00000417656 AKIRIN2Q53H80 203 aa9.73□□□□□ -0.85
SKA1-203ENST00000417656 TMEM65Q6PI78 240 aa9.73□□□□□ -0.85
SKA1-203ENST00000417656 C8orf86Q6ZUL3 223 aa9.73□□□□□ -0.85
SKA1-203ENST00000417656 OR5T1Q8NG75 326 aa9.73□□□□□ -0.85
SKA1-203ENST00000417656 OR5M8Q8NGP6 311 aa9.73□□□□□ -0.85
SKA1-203ENST00000417656 FYTTD1Q96QD9 318 aaKnown RBP9.73□□□□□ -0.85
SKA1-203ENST00000417656 ZFP57Q9NU63 452 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms