RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 UFD1Q92890 307 aa7.47□□□□□ -1.21
MDC1-202ENST00000416571 TMEM203Q969S6 136 aa7.47□□□□□ -1.21
MDC1-202ENST00000416571 UBQLN2Q9UHD9 624 aa7.47□□□□□ -1.21
MDC1-202ENST00000416571 TRBV7-1A0A0A6YYK4 115 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 TEX22C9J3V5 150 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 KBTBD11O94819 623 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 GNAO1P09471 354 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 CRHBPP24387 322 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 MAS1LP35410 378 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 PSMD7P51665 324 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 TRAM1Q15629 374 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 LIPKQ5VXJ0 399 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 H1FOOQ8IZA3 346 aaPredicted RBP7.46□□□□□ -1.22
MDC1-202ENST00000416571 VKORC1L1Q8N0U8 176 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 ZNF645Q8N7E2 425 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 OR4S2Q8NH73 311 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 CXorf58Q96LI9 332 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 OR2A7Q96R45 310 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 GFI1Q99684 422 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 SPAG8Q99932 426 aaPredicted RBP7.46□□□□□ -1.22
MDC1-202ENST00000416571 SLC2A9Q9NRM0 540 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 FKBP14Q9NWM8 211 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 MRPL27Q9P0M9 148 aaKnown RBP7.46□□□□□ -1.22
MDC1-202ENST00000416571 RAB22AQ9UL26 194 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 KCNK7Q9Y2U2 307 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 UFC1Q9Y3C8 167 aa7.46□□□□□ -1.22
MDC1-202ENST00000416571 KIR2DL5BA0A0G2JN68 375 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 KIR2DL5BA0A0G2JPC4 375 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 TMEM272A0A1B0GTI8 110 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 PTGES3LE9PB15 166 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 SLC22A5O76082 557 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 CLEC3BP05452 202 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 IL6RP08887 468 aaPredicted RBP7.45□□□□□ -1.22
MDC1-202ENST00000416571 HSMCR30P0CW71 290 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 MYOD1P15172 320 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 GNB3P16520 340 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 GALP22466 123 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 PSMA1P25786 263 aaKnown RBP7.45□□□□□ -1.22
MDC1-202ENST00000416571 CALRP27797 417 aaKnown RBP7.45□□□□□ -1.22
MDC1-202ENST00000416571 PSMB6P28072 239 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 GPR183P32249 361 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 ELLP55199 621 aaPredicted RBP7.45□□□□□ -1.22
MDC1-202ENST00000416571 HES5Q5TA89 166 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 LAMTOR1Q6IAA8 161 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 LAIR2Q6ISS4 152 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 PLET1Q6UQ28 207 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 KIR2DL5AQ8N109 375 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 OR10R2Q8NGX6 335 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 KIR2DL5BQ8NHK3 375 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 TMEM167AQ8TBQ9 72 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 FBLIM1Q8WUP2 373 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 TCTEX1D2Q8WW35 142 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 RNF183Q96D59 192 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 FANCD2OSQ96PS1 177 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 THYN1Q9P016 225 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 RBMX2Q9Y388 322 aaKnown RBP7.45□□□□□ -1.22
MDC1-202ENST00000416571 V9GY05 133 aa7.45□□□□□ -1.22
MDC1-202ENST00000416571 METTL21EPA6NDL7 271 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 MFSD2BA6NFX1 497 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 MFNGO00587 321 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 HRASP01112 189 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 IFNA4P05014 189 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 REG1AP05451 166 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 CRYGCP07315 174 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 ZNF735P0CB33 412 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 C8orf88P0DMB2 117 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 AREGP15514 252 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 HIST1H1DP16402 221 aaKnown RBP7.44□□□□□ -1.22
MDC1-202ENST00000416571 CTRB1P17538 263 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 RPL35AP18077 110 aaKnown RBP7.44□□□□□ -1.22
MDC1-202ENST00000416571 RPS25P62851 125 aaKnown RBP7.44□□□□□ -1.22
MDC1-202ENST00000416571 RPL8P62917 257 aaKnown RBP7.44□□□□□ -1.22
MDC1-202ENST00000416571 SSX1Q16384 188 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 CTRB2Q6GPI1 263 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 UNQ9165/PRO28630Q6UXU0 137 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 TMEM91Q6ZNR0 172 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 SSX9Q7RTT3 188 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 HSD17B10Q99714 261 aaKnown RBP7.44□□□□□ -1.22
MDC1-202ENST00000416571 C6orf62Q9GZU0 229 aaPredicted RBP7.44□□□□□ -1.22
MDC1-202ENST00000416571 C5orf66Q9H5L9 145 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 SCN3BQ9NY72 215 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 SPATA2Q9UM82 520 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 LSM2Q9Y333 95 aaKnown RBP7.44□□□□□ -1.22
MDC1-202ENST00000416571 OR2W1Q9Y3N9 320 aa7.44□□□□□ -1.22
MDC1-202ENST00000416571 HECTD4Q9Y4D8 3996 aa7.43□□□□□ -1.22
MDC1-202ENST00000416571 IGLV11-55A0A075B6I3 123 aa7.43□□□□□ -1.22
MDC1-202ENST00000416571 IGHV3-35A0A0C4DH35 117 aa7.43□□□□□ -1.22
MDC1-202ENST00000416571 OR4C46A6NHA9 309 aa7.43□□□□□ -1.22
MDC1-202ENST00000416571 E7EUB6 86 aa7.43□□□□□ -1.22
MDC1-202ENST00000416571 RAB27BO00194 218 aa7.43□□□□□ -1.22
MDC1-202ENST00000416571 TSPAN4O14817 238 aa7.43□□□□□ -1.22
MDC1-202ENST00000416571 CYB5BO43169 146 aa7.43□□□□□ -1.22
MDC1-202ENST00000416571 CTXN2P0C2S0 81 aa7.43□□□□□ -1.22
MDC1-202ENST00000416571 NFYAP23511 347 aaPredicted RBP7.43□□□□□ -1.22
MDC1-202ENST00000416571 RPL30P62888 115 aaKnown RBP7.43□□□□□ -1.22
MDC1-202ENST00000416571 PLA2G7Q13093 441 aa7.43□□□□□ -1.22
MDC1-202ENST00000416571 ARL6IP1Q15041 203 aa7.43□□□□□ -1.22
MDC1-202ENST00000416571 Q6ZS49 121 aa7.43□□□□□ -1.22
MDC1-202ENST00000416571 PUSL1Q8N0Z8 303 aaKnown RBP7.43□□□□□ -1.22
MDC1-202ENST00000416571 GATAD1Q8WUU5 269 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms