RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 IL15RAQ13261 267 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 PDLIM3Q53GG5 364 aaPredicted RBP13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 NMSQ5H8A3 153 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 THOC7Q6I9Y2 204 aaKnown RBP13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 ZBTB8BQ8NAP8 495 aaPredicted RBP13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 PIFOQ8TCI5 191 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 DDB2Q92466 427 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 RRNAD1Q96FB5 475 aaKnown RBP13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 PLEKHA2Q9HB19 425 aa13.55□□□□□ -0.24
SCAMP4-204ENST00000414057 A0A1B0GU03 582 aa13.54□□□□□ -0.24
SCAMP4-204ENST00000414057 MPTX1A8MV57 137 aa13.54□□□□□ -0.24
SCAMP4-204ENST00000414057 HPRT1P00492 218 aa13.54□□□□□ -0.24
SCAMP4-204ENST00000414057 IGLV1-47P01700 117 aa13.54□□□□□ -0.24
SCAMP4-204ENST00000414057 RRASP10301 218 aa13.54□□□□□ -0.24
SCAMP4-204ENST00000414057 SLC25A4P12235 298 aa13.54□□□□□ -0.24
SCAMP4-204ENST00000414057 PAX6P26367 422 aa13.54□□□□□ -0.24
SCAMP4-204ENST00000414057 ARHGDIBP52566 201 aa13.54□□□□□ -0.24
SCAMP4-204ENST00000414057 OR4S2Q8NH73 311 aa13.54□□□□□ -0.24
SCAMP4-204ENST00000414057 THAP6Q8TBB0 222 aa13.54□□□□□ -0.24
SCAMP4-204ENST00000414057 PKD1L1Q8TDX9 2849 aa13.53□□□□□ -0.24
SCAMP4-204ENST00000414057 TXNL1O43396 289 aa13.53□□□□□ -0.24
SCAMP4-204ENST00000414057 MPC2O95563 127 aa13.53□□□□□ -0.24
SCAMP4-204ENST00000414057 IGKV1-39P01597 117 aa13.53□□□□□ -0.24
SCAMP4-204ENST00000414057 IGKV1D-39P04432 117 aa13.53□□□□□ -0.24
SCAMP4-204ENST00000414057 AKR1C2P52895 323 aa13.53□□□□□ -0.24
SCAMP4-204ENST00000414057 HLA-DRB5Q30154 266 aa13.53□□□□□ -0.24
SCAMP4-204ENST00000414057 C11orf87Q6NUJ2 197 aa13.53□□□□□ -0.24
SCAMP4-204ENST00000414057 TMEM65Q6PI78 240 aa13.53□□□□□ -0.24
SCAMP4-204ENST00000414057 KLHDC1Q8N7A1 406 aa13.53□□□□□ -0.24
SCAMP4-204ENST00000414057 RNASE11Q8TAA1 199 aaKnown RBP13.53□□□□□ -0.24
SCAMP4-204ENST00000414057 FAM110DQ8TAY7 271 aaPredicted RBP13.53□□□□□ -0.24
SCAMP4-204ENST00000414057 ST6GALNAC6Q969X2 333 aa13.53□□□□□ -0.24
SCAMP4-204ENST00000414057 GSKIPQ9P0R6 139 aa13.53□□□□□ -0.24
SCAMP4-204ENST00000414057 SIGLEC9Q9Y336 463 aa13.53□□□□□ -0.24
SCAMP4-204ENST00000414057 CHST1O43916 411 aa13.52□□□□□ -0.25
SCAMP4-204ENST00000414057 RAMP3O60896 148 aa13.52□□□□□ -0.25
SCAMP4-204ENST00000414057 FCGR3BO75015 233 aa13.52□□□□□ -0.25
SCAMP4-204ENST00000414057 TSPAN15O95858 294 aa13.52□□□□□ -0.25
SCAMP4-204ENST00000414057 HTR1DP28221 377 aa13.52□□□□□ -0.25
SCAMP4-204ENST00000414057 NKX2-5P52952 324 aaPredicted RBP13.52□□□□□ -0.25
SCAMP4-204ENST00000414057 BRWD1-AS2P59051 145 aa13.52□□□□□ -0.25
SCAMP4-204ENST00000414057 RTL8BQ17RB0 113 aa13.52□□□□□ -0.25
SCAMP4-204ENST00000414057 Q5BKY6 102 aa13.52□□□□□ -0.25
SCAMP4-204ENST00000414057 DYNAPQ8N1N2 210 aa13.52□□□□□ -0.25
SCAMP4-204ENST00000414057 OR11H4Q8NGC9 324 aa13.52□□□□□ -0.25
SCAMP4-204ENST00000414057 WDR89Q96FK6 387 aaPredicted RBP13.52□□□□□ -0.25
SCAMP4-204ENST00000414057 AIFM2Q9BRQ8 373 aa13.52□□□□□ -0.25
SCAMP4-204ENST00000414057 PRSS22Q9GZN4 317 aa13.52□□□□□ -0.25
SCAMP4-204ENST00000414057 COA4Q9NYJ1 87 aa13.52□□□□□ -0.25
SCAMP4-204ENST00000414057 MEGF8Q7Z7M0 2845 aa13.52□□□□□ -0.25
SCAMP4-204ENST00000414057 TRAV14DV4A0A0A6YYC5 116 aa13.51□□□□□ -0.25
SCAMP4-204ENST00000414057 A6NDX4 124 aa13.51□□□□□ -0.25
SCAMP4-204ENST00000414057 FAM90A9PA6NNJ1 464 aa13.51□□□□□ -0.25
SCAMP4-204ENST00000414057 APOA2P02652 100 aa13.51□□□□□ -0.25
SCAMP4-204ENST00000414057 RLN2P04090 185 aa13.51□□□□□ -0.25
SCAMP4-204ENST00000414057 C4BPBP20851 252 aa13.51□□□□□ -0.25
SCAMP4-204ENST00000414057 RAB13P51153 203 aa13.51□□□□□ -0.25
SCAMP4-204ENST00000414057 ZNF816Q0VGE8 651 aaPredicted RBP13.51□□□□□ -0.25
SCAMP4-204ENST00000414057 SMCO1Q147U7 214 aa13.51□□□□□ -0.25
SCAMP4-204ENST00000414057 ARSJQ5FYB0 599 aaPredicted RBP13.51□□□□□ -0.25
SCAMP4-204ENST00000414057 PRSS54Q6PEW0 395 aa13.51□□□□□ -0.25
SCAMP4-204ENST00000414057 DRAXINQ8NBI3 349 aaPredicted RBP13.51□□□□□ -0.25
SCAMP4-204ENST00000414057 OR4D5Q8NGN0 318 aa13.51□□□□□ -0.25
SCAMP4-204ENST00000414057 HILPDAQ9Y5L2 63 aa13.51□□□□□ -0.25
SCAMP4-204ENST00000414057 BUB1B-PAK6H3BSN5 160 aa13.5□□□□□ -0.25
SCAMP4-204ENST00000414057 S1PR2O95136 353 aa13.5□□□□□ -0.25
SCAMP4-204ENST00000414057 CT45A6P0DMU7 189 aa13.5□□□□□ -0.25
SCAMP4-204ENST00000414057 CT45A5P0DMU8 189 aa13.5□□□□□ -0.25
SCAMP4-204ENST00000414057 CT45A7P0DMV0 189 aa13.5□□□□□ -0.25
SCAMP4-204ENST00000414057 LYL1P12980 280 aa13.5□□□□□ -0.25
SCAMP4-204ENST00000414057 LRRC37A5PQ49AS3 106 aa13.5□□□□□ -0.25
SCAMP4-204ENST00000414057 OR2B11Q5JQS5 317 aa13.5□□□□□ -0.25
SCAMP4-204ENST00000414057 TGIF2LXQ8IUE1 241 aa13.5□□□□□ -0.25
SCAMP4-204ENST00000414057 Q8N2B8 174 aa13.5□□□□□ -0.25
SCAMP4-204ENST00000414057 ZNF383Q8NA42 475 aa13.5□□□□□ -0.25
SCAMP4-204ENST00000414057 CFHR4Q92496 578 aa13.5□□□□□ -0.25
SCAMP4-204ENST00000414057 CACFD1Q9UGQ2 172 aa13.5□□□□□ -0.25
SCAMP4-204ENST00000414057 FXYD6-FXYD2A0A087WZ82 144 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 MARCH11A6NNE9 402 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 ST8SIA3O43173 380 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 IGKV1-5P01602 117 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 P0C879 139 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 NQO2P16083 231 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 BRS3P32247 399 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 MC5RP33032 325 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 CEACAM3P40198 252 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 ERVK-16P61578 105 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 RAB32Q13637 225 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 ZNF546Q86UE3 836 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 C9orf62Q8N4C0 152 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 OR5AN1Q8NGI8 311 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 OR4P4Q8NGL7 312 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 GPR146Q96CH1 333 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 ZNF702PQ9H963 129 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 DPM3Q9P2X0 92 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 CMYA5Q8N3K9 4069 aa13.49□□□□□ -0.25
SCAMP4-204ENST00000414057 FAM90A26D6RGX4 464 aa13.48□□□□□ -0.25
SCAMP4-204ENST00000414057 PITX3O75364 302 aa13.48□□□□□ -0.25
SCAMP4-204ENST00000414057 HRASP01112 189 aa13.48□□□□□ -0.25
SCAMP4-204ENST00000414057 GAPDHP04406 335 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms