RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 LEUTXA8MZ59 168 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 UPK2O00526 184 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 TOX4O94842 621 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 CRYGBP07316 175 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 USF1P22415 310 aaPredicted RBP6.65□□□□□ -1.34
HDAC9-207ENST00000413509 HTR1DP28221 377 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 VDAC2P45880 294 aaPredicted RBP6.65□□□□□ -1.34
HDAC9-207ENST00000413509 LGALS7P47929 136 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 UBE2E1P51965 193 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 SPCS3P61009 180 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 EWSR1Q01844 656 aaKnown RBP eCLIP6.65□□□□□ -1.34
HDAC9-207ENST00000413509 PRB3Q04118 309 aaPredicted RBP6.65□□□□□ -1.34
HDAC9-207ENST00000413509 MRGPRG-AS1Q2M3A8 158 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 PRSS57Q6UWY2 283 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 TMEM14EPQ6UXP3 125 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 THNSL2Q86YJ6 484 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 KRTAP1-3Q8IUG1 177 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 VKORC1L1Q8N0U8 176 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 TMEM252Q8N6L7 170 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 OR4A5Q8NH83 315 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 TMEM167AQ8TBQ9 72 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 ST8SIA2Q92186 375 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 LHX4Q969G2 390 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 FLYWCH2Q96CP2 140 aaKnown RBP6.65□□□□□ -1.34
HDAC9-207ENST00000413509 PHYHIPLQ96FC7 376 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 BSCL2Q96G97 398 aaPredicted RBP6.65□□□□□ -1.34
HDAC9-207ENST00000413509 HARBI1Q96MB7 349 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 RNF5Q99942 180 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 QTRT1Q9BXR0 403 aaKnown RBP6.65□□□□□ -1.34
HDAC9-207ENST00000413509 FBXL17Q9UF56 701 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 ZNF257Q9Y2Q1 563 aa6.65□□□□□ -1.34
HDAC9-207ENST00000413509 TBL2Q9Y4P3 447 aaKnown RBP6.65□□□□□ -1.34
HDAC9-207ENST00000413509 MXRA5Q9NR99 2828 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 PRRC2AP48634 2157 aaKnown RBP6.64□□□□□ -1.35
HDAC9-207ENST00000413509 NOTCH2Q04721 2471 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 CCDC168Q8NDH2 2452 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 FAM24AA6NFZ4 105 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 INS-IGF2F8WCM5 200 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 WRBO00258 174 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 KBTBD11O94819 623 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 IFNA7P01567 189 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 SAA1P0DJI8 122 aaPredicted RBP6.64□□□□□ -1.35
HDAC9-207ENST00000413509 CD1BP29016 333 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 CEACAM3P40198 252 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 AP2S1P53680 142 aaPredicted RBP6.64□□□□□ -1.35
HDAC9-207ENST00000413509 RPL23AP62750 156 aaKnown RBP6.64□□□□□ -1.35
HDAC9-207ENST00000413509 VAMP2P63027 116 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 LOXL1Q08397 574 aaPredicted RBP6.64□□□□□ -1.35
HDAC9-207ENST00000413509 EXOSC2Q13868 293 aaKnown RBP6.64□□□□□ -1.35
HDAC9-207ENST00000413509 UBAC2Q8NBM4 344 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 OR8H1Q8NGG4 311 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 RPEQ96AT9 228 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 CIB3Q96Q77 187 aaPredicted RBP6.64□□□□□ -1.35
HDAC9-207ENST00000413509 MS4A7Q9GZW8 240 aaPredicted RBP6.64□□□□□ -1.35
HDAC9-207ENST00000413509 SLC25A31Q9H0C2 315 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 WFDC1Q9HC57 220 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 PRNDQ9UKY0 176 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 TEX15Q9BXT5 2789 aa6.64□□□□□ -1.35
HDAC9-207ENST00000413509 TRAV20A0A0B4J274 112 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 RPS10-NUDT3A0A1W2PQS6 291 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 CYSRT1A8MQ03 144 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 B4DSR2 109 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 H7C2Y5 167 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 TIMM23O14925 209 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 SHOXO15266 292 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 NXPH3O95157 252 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 VENTXO95231 258 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 SPDEFO95238 335 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 MSMBP08118 114 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 IAPPP10997 89 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 CR1P17927 2039 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 GATA3P23771 443 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 SULT1A1P50225 295 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 OR2B8PP59922 312 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 HSPE1P61604 102 aaKnown RBP6.63□□□□□ -1.35
HDAC9-207ENST00000413509 NHLH2Q02577 135 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 EBI3Q14213 229 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 CCDC144NLQ6NUI1 221 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 SSX9Q7RTT3 188 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 LHFPL4Q7Z7J7 247 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 HAPLN4Q86UW8 402 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 Q8N6K4 173 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 TEX45Q8NA69 505 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 OR5B3Q8NH48 314 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 OR4A16Q8NH70 328 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 VSTM2AQ8TAG5 236 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 DTD1Q8TEA8 209 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 SCARB1Q8WTV0 552 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 ZDHHC16Q969W1 377 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 RBMXL1Q96E39 390 aaKnown RBP6.63□□□□□ -1.35
HDAC9-207ENST00000413509 RITA1Q96K30 269 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 OR4C12Q96R67 309 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 LPAR2Q9HBW0 351 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 FKBP11Q9NYL4 201 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 PAIP2BQ9ULR5 123 aaKnown RBP6.63□□□□□ -1.35
HDAC9-207ENST00000413509 TCF19Q9Y242 345 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 CSMD1Q96PZ7 3565 aa6.63□□□□□ -1.35
HDAC9-207ENST00000413509 FLNAP21333 2647 aaKnown RBP6.63□□□□□ -1.35
HDAC9-207ENST00000413509 NAV3Q8IVL0 2385 aa6.62□□□□□ -1.35
HDAC9-207ENST00000413509 CENPVL3A0A0U1RRI6 287 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms