RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 FKBP1AP62942 108 aaKnown RBP2.24□□□□□ -2.05
HMGB3P31-201ENST00000413333 SARNPP82979 210 aaKnown RBP2.24□□□□□ -2.05
HMGB3P31-201ENST00000413333 TNFAIP6P98066 277 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P31-201ENST00000413333 IFITM2Q01629 132 aa2.24□□□□□ -2.05
HMGB3P31-201ENST00000413333 TNFAIP8L3Q5GJ75 292 aa2.24□□□□□ -2.05
HMGB3P31-201ENST00000413333 ALKAL1Q6UXT8 129 aa2.24□□□□□ -2.05
HMGB3P31-201ENST00000413333 TMEM86BQ8N661 226 aa2.24□□□□□ -2.05
HMGB3P31-201ENST00000413333 CLDND2Q8NHS1 167 aa2.24□□□□□ -2.05
HMGB3P31-201ENST00000413333 AK3Q9UIJ7 227 aa2.24□□□□□ -2.05
HMGB3P31-201ENST00000413333 ANGPT4Q9Y264 503 aa2.24□□□□□ -2.05
HMGB3P31-201ENST00000413333 GRIN2BQ13224 1484 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 CLDN24A6NM45 220 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 A8MUN3 132 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 TCRBP04435 133 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 BPGMP07738 259 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 OR5G3P0C626 314 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 CD79AP11912 226 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 KCNE1P15382 129 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 HINT1P49773 126 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 SERPINB9P50453 376 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 RAB13P51153 203 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 FXYD7P58549 80 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 LSM6P62312 80 aaKnown RBP2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 ARF6P62330 175 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 CCL7P80098 99 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 AGTRAPQ6RW13 159 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 TBC1D19Q8N5T2 526 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 CLDN22Q8N7P3 220 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 SMCR5Q8TEV8 140 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 KLK6Q92876 244 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 CNBD2Q96M20 576 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 PRAP1Q96NZ9 151 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 SELENOSQ9BQE4 189 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 PAQR5Q9NXK6 330 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 VPS29Q9UBQ0 182 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 PKIGQ9Y2B9 76 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 COL5A1P20908 1838 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 ABCC12Q96J65 1359 aa2.23□□□□□ -2.05
HMGB3P31-201ENST00000413333 ZNF878C9JN71 531 aa2.22□□□□□ -2.05
HMGB3P31-201ENST00000413333 PSMD12O00232 456 aaPredicted RBP2.22□□□□□ -2.05
HMGB3P31-201ENST00000413333 ZNF728P0DKX0 622 aa2.22□□□□□ -2.05
HMGB3P31-201ENST00000413333 FGF6P10767 208 aa2.22□□□□□ -2.05
HMGB3P31-201ENST00000413333 CSRP1P21291 193 aaKnown RBP2.22□□□□□ -2.05
HMGB3P31-201ENST00000413333 CCR2P41597 374 aa2.22□□□□□ -2.05
HMGB3P31-201ENST00000413333 AP1S1P61966 158 aa2.22□□□□□ -2.05
HMGB3P31-201ENST00000413333 MRPS25P82663 173 aaKnown RBP2.22□□□□□ -2.05
HMGB3P31-201ENST00000413333 CAV1Q03135 178 aa2.22□□□□□ -2.05
HMGB3P31-201ENST00000413333 Q6ZS52 159 aa2.22□□□□□ -2.05
HMGB3P31-201ENST00000413333 LHFPL1Q86WI0 220 aa2.22□□□□□ -2.05
HMGB3P31-201ENST00000413333 OR1L8Q8NGR8 309 aa2.22□□□□□ -2.05
HMGB3P31-201ENST00000413333 ZNF675Q8TD23 568 aa2.22□□□□□ -2.05
HMGB3P31-201ENST00000413333 MRPS24Q96EL2 167 aaKnown RBP2.22□□□□□ -2.05
HMGB3P31-201ENST00000413333 CMTM6Q9NX76 183 aa2.22□□□□□ -2.05
HMGB3P31-201ENST00000413333 PSORS1C2Q9UIG4 136 aa2.22□□□□□ -2.05
HMGB3P31-201ENST00000413333 TRGV4A0A0C4DH28 118 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 A0A1B0GW54 56 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 C2orf74A8MZ97 194 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 I3L521 148 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 KPNA3O00505 521 aaPredicted RBP2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 BHLHE40O14503 412 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 CHP2O43745 196 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 ZFYVE9O95405 1425 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 KRT75O95678 551 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 CA5AP35218 305 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 FUSP35637 526 aaKnown RBP eCLIP2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 GNG10P50151 68 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 MYO9BQ13459 2157 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 AKIRIN2Q53H80 203 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 SPOPLQ6IQ16 392 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 ZNF767PQ75MW2 155 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 SSX8Q7RTT4 187 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 SLC35E3Q7Z769 313 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 OR5B17Q8NGF7 314 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 ROPN1LQ96C74 230 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 PPP1R2P1Q96PQ5 205 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 REREQ9P2R6 1566 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 SCN9AQ15858 1988 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 ITGB4P16144 1822 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 SLIT2O94813 1529 aa2.21□□□□□ -2.06
HMGB3P31-201ENST00000413333 DCCP43146 1447 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 NUP160Q12769 1436 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 TRGV5A0A0B4J1U4 118 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 MUC21A0A0G2JKD1 596 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 MUC21A0A140T8X8 626 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 KNCNA6PVL3 124 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 E5RI56 91 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 H3BQV1 296 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 PGRMC1O00264 195 aaKnown RBP2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 CIAO1O76071 339 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 UCHL1P09936 223 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 ZNF705DP0CH99 300 aaPredicted RBP2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 CD24P25063 80 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 S100A7P31151 101 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 CSN1S1P47710 185 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 OR4D2P58180 307 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 RAB14P61106 215 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 RANP62826 216 aaKnown RBP2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 TMED2Q15363 201 aa2.2□□□□□ -2.06
HMGB3P31-201ENST00000413333 GRK1Q15835 563 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms