RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 EIF3GO75821 320 aaKnown RBP eCLIP6.34□□□□□ -1.39
PTPN3-203ENST00000412145 PLEKHB2Q96CS7 222 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 SOSTQ9BQB4 213 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 TRAV9-2A0A087WT02 112 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 ERGP11308 486 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 MAGEA5P43359 124 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 PVRIGQ6DKI7 326 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 GPR146Q96CH1 333 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 BEX4Q9NWD9 120 aaPredicted RBP6.34□□□□□ -1.39
PTPN3-203ENST00000412145 SMCHD1A6NHR9 2005 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 PAPPAQ13219 1627 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 PF4V1P10720 104 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 MYF5P13349 255 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 FAM214BQ7L5A3 538 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 CT55Q8WUE5 264 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 LAMTOR2Q9Y2Q5 125 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 GLI3P10071 1580 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 LINC00614P0C842 121 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 SSBP2P81877 361 aaPredicted RBP6.34□□□□□ -1.39
PTPN3-203ENST00000412145 TMEM91Q6ZNR0 172 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 Q6ZS52 159 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 GNB1LQ9BYB4 327 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 OTORQ9NRC9 128 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 F11RQ9Y624 299 aaKnown RBP6.34□□□□□ -1.39
PTPN3-203ENST00000412145 CDC42EP2O14613 210 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 PDLIM4P50479 330 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 GAGE13Q4V321 117 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 TMEM42Q69YG0 159 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 SELENOHQ8IZQ5 122 aaKnown RBP6.34□□□□□ -1.39
PTPN3-203ENST00000412145 ZNF488Q96MN9 340 aa6.34□□□□□ -1.39
PTPN3-203ENST00000412145 AKIRIN1Q9H9L7 192 aaPredicted RBP6.34□□□□□ -1.39
PTPN3-203ENST00000412145 PIGYQ3MUY2 71 aa6.34□□□□□ -1.4
PTPN3-203ENST00000412145 THSD4Q6ZMP0 1018 aa6.34□□□□□ -1.4
PTPN3-203ENST00000412145 OR4D11Q8NGI4 311 aa6.34□□□□□ -1.4
PTPN3-203ENST00000412145 HS3ST3B1Q9Y662 390 aa6.34□□□□□ -1.4
PTPN3-203ENST00000412145 PEX7O00628 323 aa6.34□□□□□ -1.4
PTPN3-203ENST00000412145 IGFBP6P24592 240 aaPredicted RBP6.34□□□□□ -1.4
PTPN3-203ENST00000412145 FGFRL1Q8N441 504 aa6.34□□□□□ -1.4
PTPN3-203ENST00000412145 APCDD1LQ8NCL9 501 aa6.34□□□□□ -1.4
PTPN3-203ENST00000412145 PATE1Q8WXA2 126 aa6.34□□□□□ -1.4
PTPN3-203ENST00000412145 NABP2Q9BQ15 211 aa6.34□□□□□ -1.4
PTPN3-203ENST00000412145 EDA2RQ9HAV5 297 aa6.34□□□□□ -1.4
PTPN3-203ENST00000412145 VWC2LB2RUY7 222 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 PLA2G10O15496 165 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 PGLYRP1O75594 196 aaPredicted RBP6.33□□□□□ -1.4
PTPN3-203ENST00000412145 C1orf162Q8NEQ5 155 aaPredicted RBP6.33□□□□□ -1.4
PTPN3-203ENST00000412145 PPP1R3EQ9H7J1 279 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 LOC102723996A0A087X1L8 192 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 TRAV8-6A0A0B4J262 113 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 SOX8P57073 446 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 TCF19Q9Y242 345 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 CHTOPQ9Y3Y2 248 aaKnown RBP6.33□□□□□ -1.4
PTPN3-203ENST00000412145 MARF1Q9Y4F3 1742 aaKnown RBP6.33□□□□□ -1.4
PTPN3-203ENST00000412145 GFRA1P56159 465 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 CKS1BP61024 79 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 MESP2Q0VG99 397 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 ASCC3Q8N3C0 2202 aaKnown RBP6.33□□□□□ -1.4
PTPN3-203ENST00000412145 AKAP11Q9UKA4 1901 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 M0R2P5 195 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 HYAL3O43820 417 aaPredicted RBP6.33□□□□□ -1.4
PTPN3-203ENST00000412145 PEX11BO96011 259 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 CTAG1AP78358 180 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 GTF3AQ92664 365 aaKnown RBP6.33□□□□□ -1.4
PTPN3-203ENST00000412145 QSER1Q2KHR3 1735 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 OR2H2O95918 312 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 PF4P02776 101 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 ADRA2AP08913 450 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 TMEM95Q3KNT9 176 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 ZNF585BQ52M93 769 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 NEGR1Q7Z3B1 354 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 LHFPL4Q7Z7J7 247 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 NPFFR1Q9GZQ6 430 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 UNC13CQ8NB66 2214 aa6.33□□□□□ -1.4
PTPN3-203ENST00000412145 CD200R1LQ6Q8B3 271 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 TMEM54Q969K7 222 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 FOCADQ5VW36 1801 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 ECM29Q5VYK3 1845 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 RNF224P0DH78 156 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 MIC13Q5XKP0 118 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 GOLT1AQ6ZVE7 132 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 FER1L6-AS1Q8NA97 138 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 NEU1Q99519 415 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 RPP25Q9BUL9 199 aaKnown RBP6.32□□□□□ -1.4
PTPN3-203ENST00000412145 RNF115Q9Y4L5 304 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 MYO16Q9Y6X6 1858 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 CACNA1SQ13698 1873 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 TRBV5-3A0A0A0MS03 114 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 TDGF1P13385 188 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 ZNF250P15622 560 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 SIGLEC14Q08ET2 396 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 DCAF10Q5QP82 559 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 APOHP02749 345 aaPredicted RBP6.32□□□□□ -1.4
PTPN3-203ENST00000412145 TMEM249Q2WGJ8 235 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 SLC25A48Q6ZT89 311 aaKnown RBP6.32□□□□□ -1.4
PTPN3-203ENST00000412145 Q96M66 194 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 DCTN5Q9BTE1 182 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 OSTCQ9NRP0 149 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 VN1R4Q7Z5H5 301 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 FBLIM1Q8WUP2 373 aa6.32□□□□□ -1.4
PTPN3-203ENST00000412145 ORAOV1Q8WV07 137 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms