RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 KBTBD11O94819 623 aa14.89□□□□□ -0.03
CDC42-204ENST00000411827 IL6RP08887 468 aaPredicted RBP14.89□□□□□ -0.03
CDC42-204ENST00000411827 SAA1P0DJI8 122 aaPredicted RBP14.89□□□□□ -0.03
CDC42-204ENST00000411827 G6PCP35575 357 aa14.89□□□□□ -0.03
CDC42-204ENST00000411827 PLGLAQ15195 96 aa14.89□□□□□ -0.03
CDC42-204ENST00000411827 THOC7Q6I9Y2 204 aaKnown RBP14.89□□□□□ -0.03
CDC42-204ENST00000411827 OR4A47Q6IF82 309 aa14.89□□□□□ -0.03
CDC42-204ENST00000411827 FAM71E2Q8N5Q1 922 aa14.89□□□□□ -0.03
CDC42-204ENST00000411827 OR52B4Q8NGK2 314 aa14.89□□□□□ -0.03
CDC42-204ENST00000411827 LHFPL5Q8TAF8 219 aa14.89□□□□□ -0.03
CDC42-204ENST00000411827 TMEM140Q9NV12 185 aa14.89□□□□□ -0.03
CDC42-204ENST00000411827 METTL1Q9UBP6 276 aaKnown RBP14.89□□□□□ -0.03
CDC42-204ENST00000411827 SIGLEC9Q9Y336 463 aa14.89□□□□□ -0.03
CDC42-204ENST00000411827 TCF21O43680 179 aa14.88□□□□□ -0.03
CDC42-204ENST00000411827 SLC25A17O43808 307 aa14.88□□□□□ -0.03
CDC42-204ENST00000411827 ACTL6BO94805 426 aa14.88□□□□□ -0.03
CDC42-204ENST00000411827 CRYGBP07316 175 aa14.88□□□□□ -0.03
CDC42-204ENST00000411827 P0C879 139 aa14.88□□□□□ -0.03
CDC42-204ENST00000411827 NMSQ5H8A3 153 aa14.88□□□□□ -0.03
CDC42-204ENST00000411827 LYZL2Q7Z4W2 148 aa14.88□□□□□ -0.03
CDC42-204ENST00000411827 FOXRED2Q8IWF2 684 aa14.88□□□□□ -0.03
CDC42-204ENST00000411827 UXS1Q8NBZ7 420 aa14.88□□□□□ -0.03
CDC42-204ENST00000411827 ASB13Q8WXK3 278 aa14.88□□□□□ -0.03
CDC42-204ENST00000411827 NPFFR1Q9GZQ6 430 aa14.88□□□□□ -0.03
CDC42-204ENST00000411827 MED28Q9H204 178 aa14.88□□□□□ -0.03
CDC42-204ENST00000411827 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.88□□□□□ -0.03
CDC42-204ENST00000411827 ANK3Q12955 4377 aaKnown RBP14.87□□□□□ -0.03
CDC42-204ENST00000411827 MXRA5Q9NR99 2828 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 A0A0B4J293 547 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 DNAJC9-AS1A6NH13 148 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 UPK2O00526 184 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 IGKV1-5P01602 117 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 HLA-DRB1P01911 266 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 RNASE1P07998 156 aaKnown RBP14.87□□□□□ -0.03
CDC42-204ENST00000411827 SULT1A3P0DMM9 295 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 SULT1A4P0DMN0 295 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 F2RL1P55085 397 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 RPL8P62917 257 aaKnown RBP14.87□□□□□ -0.03
CDC42-204ENST00000411827 CYCSP99999 105 aaKnown RBP14.87□□□□□ -0.03
CDC42-204ENST00000411827 LY6EQ16553 131 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 PRSS8Q16651 343 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 ZNF429Q86V71 674 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 C5orf56Q8N8D9 126 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 Q8N9W7 124 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 OR4A16Q8NH70 328 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 RITA1Q96K30 269 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 RANBP3Q9H6Z4 567 aaPredicted RBP14.87□□□□□ -0.03
CDC42-204ENST00000411827 ZNF257Q9Y2Q1 563 aa14.87□□□□□ -0.03
CDC42-204ENST00000411827 HOXB5P09067 269 aa14.86□□□□□ -0.03
CDC42-204ENST00000411827 SMCO1Q147U7 214 aa14.86□□□□□ -0.03
CDC42-204ENST00000411827 AARDQ4LEZ3 155 aa14.86□□□□□ -0.03
CDC42-204ENST00000411827 GSG1LQ6UXU4 331 aa14.86□□□□□ -0.03
CDC42-204ENST00000411827 ZNF562Q6V9R5 426 aa14.86□□□□□ -0.03
CDC42-204ENST00000411827 MRPL41Q8IXM3 137 aaKnown RBP14.86□□□□□ -0.03
CDC42-204ENST00000411827 OR5B3Q8NH48 314 aa14.86□□□□□ -0.03
CDC42-204ENST00000411827 ZFP57Q9NU63 452 aa14.86□□□□□ -0.03
CDC42-204ENST00000411827 FAM90A26D6RGX4 464 aa14.85□□□□□ -0.03
CDC42-204ENST00000411827 TRIM77I1YAP6 450 aa14.85□□□□□ -0.03
CDC42-204ENST00000411827 KCNAB3O43448 404 aa14.85□□□□□ -0.03
CDC42-204ENST00000411827 GPR137BO60478 399 aa14.85□□□□□ -0.03
CDC42-204ENST00000411827 LY86O95711 162 aa14.85□□□□□ -0.03
CDC42-204ENST00000411827 GGNBP1Q5YKI7 109 aa14.85□□□□□ -0.03
CDC42-204ENST00000411827 SSX9Q7RTT3 188 aa14.85□□□□□ -0.03
CDC42-204ENST00000411827 TMEM219Q86XT9 240 aa14.85□□□□□ -0.03
CDC42-204ENST00000411827 VKORC1L1Q8N0U8 176 aa14.85□□□□□ -0.03
CDC42-204ENST00000411827 OR52E5Q8NH55 327 aa14.85□□□□□ -0.03
CDC42-204ENST00000411827 SRSF8Q9BRL6 282 aaKnown RBP14.85□□□□□ -0.03
CDC42-204ENST00000411827 CHIAQ9BZP6 476 aa14.85□□□□□ -0.03
CDC42-204ENST00000411827 COMMD5Q9GZQ3 224 aa14.85□□□□□ -0.03
CDC42-204ENST00000411827 FBXL15Q9H469 300 aa14.85□□□□□ -0.03
CDC42-204ENST00000411827 FOXA2Q9Y261 457 aaPredicted RBP14.85□□□□□ -0.03
CDC42-204ENST00000411827 RBMXL2O75526 392 aaKnown RBP14.84□□□□□ -0.03
CDC42-204ENST00000411827 CRYBA1P05813 215 aa14.84□□□□□ -0.03
CDC42-204ENST00000411827 RRAS2P62070 204 aaPredicted RBP14.84□□□□□ -0.03
CDC42-204ENST00000411827 HSD17B13Q7Z5P4 300 aaPredicted RBP14.84□□□□□ -0.03
CDC42-204ENST00000411827 GPR146Q96CH1 333 aa14.84□□□□□ -0.03
CDC42-204ENST00000411827 PDCD10Q9BUL8 212 aa14.84□□□□□ -0.03
CDC42-204ENST00000411827 PRSS22Q9GZN4 317 aa14.84□□□□□ -0.03
CDC42-204ENST00000411827 ZNF430Q9H8G1 570 aaPredicted RBP14.84□□□□□ -0.03
CDC42-204ENST00000411827 TMEM14BQ9NUH8 114 aa14.84□□□□□ -0.03
CDC42-204ENST00000411827 PRR13Q9NZ81 148 aa14.84□□□□□ -0.03
CDC42-204ENST00000411827 FN1P02751 2386 aaKnown RBP14.83□□□□□ -0.03
CDC42-204ENST00000411827 C15orf61A6NNL5 157 aa14.83□□□□□ -0.04
CDC42-204ENST00000411827 TRAPPC2P0DI81 140 aa14.83□□□□□ -0.04
CDC42-204ENST00000411827 TRAPPC2BP0DI82 140 aa14.83□□□□□ -0.04
CDC42-204ENST00000411827 CNTFRP26992 372 aa14.83□□□□□ -0.04
CDC42-204ENST00000411827 RELBQ01201 579 aa14.83□□□□□ -0.04
CDC42-204ENST00000411827 OR5M8Q8NGP6 311 aa14.83□□□□□ -0.04
CDC42-204ENST00000411827 OR1L8Q8NGR8 309 aa14.83□□□□□ -0.04
CDC42-204ENST00000411827 C2orf50Q96LR7 162 aa14.83□□□□□ -0.04
CDC42-204ENST00000411827 TMEM68Q96MH6 324 aa14.83□□□□□ -0.04
CDC42-204ENST00000411827 CACNG5Q9UF02 275 aa14.83□□□□□ -0.04
CDC42-204ENST00000411827 ZNF580Q9UK33 172 aa14.83□□□□□ -0.04
CDC42-204ENST00000411827 C5orf51A6NDU8 294 aa14.82□□□□□ -0.04
CDC42-204ENST00000411827 ADAP1O75689 374 aa14.82□□□□□ -0.04
CDC42-204ENST00000411827 HSPE1P61604 102 aaKnown RBP14.82□□□□□ -0.04
CDC42-204ENST00000411827 UBA52P62987 128 aaKnown RBP14.82□□□□□ -0.04
CDC42-204ENST00000411827 IAH1Q2TAA2 248 aaPredicted RBP14.82□□□□□ -0.04
CDC42-204ENST00000411827 PDLIM3Q53GG5 364 aaPredicted RBP14.82□□□□□ -0.04
CDC42-204ENST00000411827 C13orf42A0A1B0GVH6 325 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms