RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CEP164Q9UPV0 1460 aa3.09□□□□□ -1.92
LSM5-205ENST00000409952 MAP1LC3B2A6NCE7 125 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 SIGLEC16A6NMB1 481 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 AIPO00170 330 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 PLA2G10O15496 165 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 SLC25A20O43772 301 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 DHFRP00374 187 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 SRP19P09132 144 aaKnown RBP3.08□□□□□ -1.92
LSM5-205ENST00000409952 ZNF705DP0CH99 300 aaPredicted RBP3.08□□□□□ -1.92
LSM5-205ENST00000409952 SMIM10L2AP0DMW4 78 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 SMIM10L2BP0DMW5 78 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 IGHV3-30-3P0DP02 117 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 DCUN1D2Q6PH85 259 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 DAND5Q8N907 189 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 STARD4Q96DR4 205 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 TMEM70Q9BUB7 260 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 PBDC1Q9BVG4 233 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 MAP1LC3BQ9GZQ8 125 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 MED29Q9NX70 200 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 OR5V1Q9UGF6 321 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 HSPB11Q9Y547 144 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 MIA2Q96PC5 1412 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 MRC2Q9UBG0 1479 aa3.08□□□□□ -1.92
LSM5-205ENST00000409952 CHD1O14646 1710 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 IGKV1OR2-108A0A075B7D4 117 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 IGSF23A1L1A6 192 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 TMEM150BA6NC51 233 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 PRORSD1PA6NEY8 169 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 A8MUU9 505 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 SLC17A3O00476 420 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 LECT2O14960 151 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 BET1O15155 118 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 PFDN1O60925 122 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 ZNF324O75467 553 aaPredicted RBP3.07□□□□□ -1.92
LSM5-205ENST00000409952 MED6O75586 246 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 IGLV7-43P04211 117 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 NPPCP23582 126 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 NPY1RP25929 384 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 CRYBB3P26998 211 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 CRABP2P29373 138 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 TSPEAR-AS2P59090 65 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 HBA1P69905 142 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 ZNF616Q08AN1 781 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 SMCO1Q147U7 214 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 C2orf83Q53S99 150 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 LYZL2Q7Z4W2 148 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 RPRMLQ8N4K4 120 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 FAM24BQ8N5W8 94 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 PACRGLQ8N7B6 248 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 APCDD1LQ8NCL9 501 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 GRPEL2Q8TAA5 225 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 SKA2Q8WVK7 121 aaPredicted RBP3.07□□□□□ -1.92
LSM5-205ENST00000409952 MAFIPQ8WZ33 124 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 SLC7A6Q92536 515 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 RNASE6Q93091 150 aaKnown RBP3.07□□□□□ -1.92
LSM5-205ENST00000409952 C11orf68Q9H3H3 251 aaKnown RBP3.07□□□□□ -1.92
LSM5-205ENST00000409952 TP53TG3Q9ULZ0 132 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 U3KQK5 164 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 LAMC3Q9Y6N6 1575 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 LOXHD1Q8IVV2 1947 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 PLXNB3Q9ULL4 1909 aa3.07□□□□□ -1.92
LSM5-205ENST00000409952 TRAV9-1A0A075B6T8 112 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 IGKV3D-20A0A0C4DH25 116 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 SMIM17P0DL12 118 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 GLRXP35754 106 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 RAB13P51153 203 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 CRB1P82279 1406 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 LGALS9BQ3B8N2 356 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 TMEM128Q5BJH2 165 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 CEP170Q5SW79 1584 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 ARHGAP21Q5T5U3 1957 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 LGALS9CQ6DKI2 356 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 SLC25A34Q6PIV7 304 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 Q6Q795 121 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 C16orf47Q6ZP98 133 aaPredicted RBP3.06□□□□□ -1.92
LSM5-205ENST00000409952 KMT2EQ8IZD2 1858 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 OSR2Q8N2R0 312 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 BPIFB6Q8NFQ5 453 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 FNDC9Q8TBE3 224 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 SLC25A40Q8TBP6 338 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 TOMM6Q96B49 74 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 IGF2BP2-AS1Q96M15 143 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 SPIN2AQ99865 258 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 SPIN2BQ9BPZ2 258 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 KRTAP4-3Q9BYR4 195 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 CHST6Q9GZX3 395 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 VCXQ9H320 206 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 C11orf1Q9H5F2 150 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 PRR34Q9NV39 138 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 TVP23BQ9NYZ1 205 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 SNX12Q9UMY4 172 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 CYSLTR1Q9Y271 337 aa3.06□□□□□ -1.92
LSM5-205ENST00000409952 BAZ1BQ9UIG0 1483 aaKnown RBP3.05□□□□□ -1.92
LSM5-205ENST00000409952 SSH2Q76I76 1423 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 TRBV19A0A075B6N1 114 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 A0A087WUU8 490 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 TRAV4A0A0B4J268 109 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 A0A0B4J2C4 111 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 DPRXA6NFQ7 191 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 I3L521 148 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms