RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 IGSF23A1L1A6 192 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 CEBPZOSA8MTT3 80 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 TXNL1O43396 289 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 BCL2L11O43521 198 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 CNTFRP26992 372 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 UBE2E1P51965 193 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 PAX9P55771 341 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 NHLH2Q02577 135 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 TMEM267Q0VDI3 215 aaPredicted RBP10.04□□□□□ -0.8
CHMP3-204ENST00000409727 HNF4GQ14541 408 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 ARPC5LQ9BPX5 153 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 HINT2Q9BX68 163 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 REG4Q9BYZ8 158 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 C7orf69Q9H7B7 122 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 LYRM2Q9NU23 88 aaPredicted RBP10.04□□□□□ -0.8
CHMP3-204ENST00000409727 PSENENQ9NZ42 101 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 PAIP2BQ9ULR5 123 aaKnown RBP10.04□□□□□ -0.8
CHMP3-204ENST00000409727 NAV2Q8IVL1 2488 aa10.04□□□□□ -0.8
CHMP3-204ENST00000409727 CENPVL3A0A0U1RRI6 287 aa10.03□□□□□ -0.8
CHMP3-204ENST00000409727 FAM90A26D6RGX4 464 aa10.03□□□□□ -0.8
CHMP3-204ENST00000409727 SLC25A17O43808 307 aa10.03□□□□□ -0.8
CHMP3-204ENST00000409727 GPR137BO60478 399 aa10.03□□□□□ -0.8
CHMP3-204ENST00000409727 CST7O76096 145 aa10.03□□□□□ -0.8
CHMP3-204ENST00000409727 CFDP00746 253 aaPredicted RBP10.03□□□□□ -0.8
CHMP3-204ENST00000409727 SAA4P35542 130 aa10.03□□□□□ -0.8
CHMP3-204ENST00000409727 RPL23AP62750 156 aaKnown RBP10.03□□□□□ -0.8
CHMP3-204ENST00000409727 SPANXN5Q5MJ07 72 aa10.03□□□□□ -0.8
CHMP3-204ENST00000409727 RUSC1-AS1Q66K80 236 aa10.03□□□□□ -0.8
CHMP3-204ENST00000409727 TMEM217Q8N7C4 229 aa10.03□□□□□ -0.8
CHMP3-204ENST00000409727 MBD6Q96DN6 1003 aa10.03□□□□□ -0.8
CHMP3-204ENST00000409727 RAB40CQ96S21 281 aa10.03□□□□□ -0.8
CHMP3-204ENST00000409727 AUP1Q9Y679 476 aa10.03□□□□□ -0.8
CHMP3-204ENST00000409727 CSMD1Q96PZ7 3565 aa10.03□□□□□ -0.8
CHMP3-204ENST00000409727 APCP25054 2843 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 TRAV40A0A0B4J280 105 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 FAM90A9PA6NNJ1 464 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 C15orf61A6NNL5 157 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 UPK2O00526 184 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 MED6O75586 246 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 IGKV1D-33P01593 117 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 IGKV1-33P01594 117 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 IGLV2-23P01705 113 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 EWSR1Q01844 656 aaKnown RBP eCLIP10.02□□□□□ -0.8
CHMP3-204ENST00000409727 HES1Q14469 280 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 POU2AF1Q16633 256 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 TEX261Q6UWH6 196 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 BRD3OSQ6XYD6 125 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 TMEM252Q8N6L7 170 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 LINC01356Q8N9X3 169 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 DTD1Q8TEA8 209 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 AIFM2Q9BRQ8 373 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 TPSG1Q9NRR2 321 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 FBXL17Q9UF56 701 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 OR51B2Q9Y5P1 312 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 U3KQ87 197 aa10.02□□□□□ -0.8
CHMP3-204ENST00000409727 MAP1AP78559 2803 aaPredicted RBP10.02□□□□□ -0.81
CHMP3-204ENST00000409727 NPFFO15130 113 aa10.02□□□□□ -0.81
CHMP3-204ENST00000409727 KBTBD11O94819 623 aa10.02□□□□□ -0.81
CHMP3-204ENST00000409727 VENTXO95231 258 aa10.02□□□□□ -0.81
CHMP3-204ENST00000409727 MINOS1Q5TGZ0 78 aa10.02□□□□□ -0.81
CHMP3-204ENST00000409727 GPR157Q5UAW9 335 aa10.02□□□□□ -0.81
CHMP3-204ENST00000409727 KRTAP1-3Q8IUG1 177 aa10.02□□□□□ -0.81
CHMP3-204ENST00000409727 BET1LQ9NYM9 111 aa10.02□□□□□ -0.81
CHMP3-204ENST00000409727 WSB1Q9Y6I7 421 aa10.02□□□□□ -0.81
CHMP3-204ENST00000409727 MINOS1-NBL1R4GNA1 71 aa10.02□□□□□ -0.81
CHMP3-204ENST00000409727 TGFAP01135 160 aa10.01□□□□□ -0.81
CHMP3-204ENST00000409727 METTL15P1P0C7V9 234 aa10.01□□□□□ -0.81
CHMP3-204ENST00000409727 HOXA1P49639 335 aaPredicted RBP10.01□□□□□ -0.81
CHMP3-204ENST00000409727 SPCS3P61009 180 aa10.01□□□□□ -0.81
CHMP3-204ENST00000409727 LOXL1Q08397 574 aaPredicted RBP10.01□□□□□ -0.81
CHMP3-204ENST00000409727 CLINT1Q14677 625 aa10.01□□□□□ -0.81
CHMP3-204ENST00000409727 VMA21Q3ZAQ7 101 aa10.01□□□□□ -0.81
CHMP3-204ENST00000409727 FBLN7Q53RD9 439 aa10.01□□□□□ -0.81
CHMP3-204ENST00000409727 SLC51BQ86UW2 128 aa10.01□□□□□ -0.81
CHMP3-204ENST00000409727 PUSL1Q8N0Z8 303 aaKnown RBP10.01□□□□□ -0.81
CHMP3-204ENST00000409727 OR8H3Q8N146 312 aa10.01□□□□□ -0.81
CHMP3-204ENST00000409727 CFHR4Q92496 578 aa10.01□□□□□ -0.81
CHMP3-204ENST00000409727 CLCC1Q96S66 551 aa10.01□□□□□ -0.81
CHMP3-204ENST00000409727 SLC25A31Q9H0C2 315 aa10.01□□□□□ -0.81
CHMP3-204ENST00000409727 TMEM14BQ9NUH8 114 aa10.01□□□□□ -0.81
CHMP3-204ENST00000409727 PRNDQ9UKY0 176 aa10.01□□□□□ -0.81
CHMP3-204ENST00000409727 TCF19Q9Y242 345 aa10.01□□□□□ -0.81
CHMP3-204ENST00000409727 FOXA2Q9Y261 457 aaPredicted RBP10.01□□□□□ -0.81
CHMP3-204ENST00000409727 SNRNP70P08621 437 aaKnown RBP10□□□□□ -0.81
CHMP3-204ENST00000409727 IGHV4-38-2P0DP08 117 aa10□□□□□ -0.81
CHMP3-204ENST00000409727 ARHGDIBP52566 201 aa10□□□□□ -0.81
CHMP3-204ENST00000409727 PJVKQ0ZLH3 352 aa10□□□□□ -0.81
CHMP3-204ENST00000409727 EXOSC2Q13868 293 aaKnown RBP10□□□□□ -0.81
CHMP3-204ENST00000409727 RPL7L1Q6DKI1 246 aaKnown RBP10□□□□□ -0.81
CHMP3-204ENST00000409727 CCDC144NLQ6NUI1 221 aa10□□□□□ -0.81
CHMP3-204ENST00000409727 ALKAL2Q6UX46 152 aa10□□□□□ -0.81
CHMP3-204ENST00000409727 ZNF429Q86V71 674 aa10□□□□□ -0.81
CHMP3-204ENST00000409727 ZNF680Q8NEM1 530 aa10□□□□□ -0.81
CHMP3-204ENST00000409727 WFDC11Q8NEX6 87 aa10□□□□□ -0.81
CHMP3-204ENST00000409727 SMIM8Q96KF7 97 aa10□□□□□ -0.81
CHMP3-204ENST00000409727 CYTL1Q9NRR1 136 aa10□□□□□ -0.81
CHMP3-204ENST00000409727 TBL2Q9Y4P3 447 aaKnown RBP10□□□□□ -0.81
CHMP3-204ENST00000409727 TRAV20A0A0B4J274 112 aa10□□□□□ -0.81
CHMP3-204ENST00000409727 IGHV1-69DA0A0B4J2H0 117 aa10□□□□□ -0.81
CHMP3-204ENST00000409727 RGS13O14921 159 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms