RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 RIBC1Q8N443 379 aaPredicted RBP0.46□□□□□ -2.34
PMS1-203ENST00000409593 SERPINI1Q99574 410 aa0.46□□□□□ -2.34
PMS1-203ENST00000409593 GMEB1Q9Y692 573 aa0.46□□□□□ -2.34
PMS1-203ENST00000409593 HEATR5AQ86XA9 2040 aa0.46□□□□□ -2.34
PMS1-203ENST00000409593 CCRL2O00421 344 aa0.45□□□□□ -2.34
PMS1-203ENST00000409593 SDCBPO00560 298 aaPredicted RBP0.45□□□□□ -2.34
PMS1-203ENST00000409593 ITGB1BP1O14713 200 aa0.45□□□□□ -2.34
PMS1-203ENST00000409593 FAM27BQ5VT28 67 aa0.45□□□□□ -2.34
PMS1-203ENST00000409593 ZNF676Q8N7Q3 588 aa0.45□□□□□ -2.34
PMS1-203ENST00000409593 TIPINQ9BVW5 301 aa0.45□□□□□ -2.34
PMS1-203ENST00000409593 USP24Q9UPU5 2620 aa0.45□□□□□ -2.34
PMS1-203ENST00000409593 NEBP20929 6669 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 A0A1B0GW54 56 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 NEMFO60524 1076 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 TPM1P09493 284 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 CCL5P13501 91 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 SLAMF1Q13291 335 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 CRLF3Q8IUI8 442 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 C17orf78Q8N4C9 275 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 C12orf29Q8N999 325 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 ZNF565Q8N9K5 539 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 ZNF439Q8NDP4 499 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 TRABDQ9H4I3 376 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 CHMP5Q9NZZ3 219 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 TIMM22Q9Y584 194 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 LHFPL6Q9Y693 200 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 A0A1W2PP64 1363 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 EXPH5Q8NEV8 1989 aa0.44□□□□□ -2.34
PMS1-203ENST00000409593 TEX50A0A1B0GTY4 177 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 TMEM212A6NML5 194 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 COX7A2LO14548 114 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 HAAOP46952 286 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 EBPQ15125 230 aaKnown RBP0.43□□□□□ -2.34
PMS1-203ENST00000409593 LRRC26Q2I0M4 334 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 BOD1L2Q8IYS8 172 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 OR5L1Q8NGL2 311 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 SLC37A2Q8TED4 501 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 GNPNAT1Q96EK6 184 aaPredicted RBP0.43□□□□□ -2.34
PMS1-203ENST00000409593 ANKRD36BP1Q96IX9 119 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 CCL13Q99616 98 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 TONSLQ96HA7 1378 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 TRAV14DV4A0A0A6YYC5 116 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 F8VZ95 297 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 TRAPPC2LH3BP13 241 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 RPS24P62847 133 aaKnown RBP0.43□□□□□ -2.34
PMS1-203ENST00000409593 DHFR2Q86XF0 187 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 OR5B17Q8NGF7 314 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 ERMAPQ96PL5 475 aaPredicted RBP0.43□□□□□ -2.34
PMS1-203ENST00000409593 HRASLSQ9HDD0 168 aa0.43□□□□□ -2.34
PMS1-203ENST00000409593 GOLGA6L10A6NI86 522 aa0.42□□□□□ -2.34
PMS1-203ENST00000409593 SMLR1H3BR10 107 aa0.42□□□□□ -2.34
PMS1-203ENST00000409593 NSA2O95478 260 aaKnown RBP0.42□□□□□ -2.34
PMS1-203ENST00000409593 IL6P05231 212 aa0.42□□□□□ -2.34
PMS1-203ENST00000409593 MSMBP08118 114 aa0.42□□□□□ -2.34
PMS1-203ENST00000409593 HIST1H1CP16403 213 aaKnown RBP0.42□□□□□ -2.34
PMS1-203ENST00000409593 CD40LGP29965 261 aa0.42□□□□□ -2.34
PMS1-203ENST00000409593 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
PMS1-203ENST00000409593 AADACL4Q5VUY2 407 aa0.42□□□□□ -2.34
PMS1-203ENST00000409593 TEX36Q5VZQ5 186 aa0.42□□□□□ -2.34
PMS1-203ENST00000409593 TBC1D19Q8N5T2 526 aa0.42□□□□□ -2.34
PMS1-203ENST00000409593 HES4Q9HCC6 221 aa0.42□□□□□ -2.34
PMS1-203ENST00000409593 PRELID1Q9Y255 219 aa0.42□□□□□ -2.34
PMS1-203ENST00000409593 KIF24Q5T7B8 1368 aa0.42□□□□□ -2.34
PMS1-203ENST00000409593 MKRN2OSH3BPM6 223 aa0.41□□□□□ -2.34
PMS1-203ENST00000409593 PMP2P02689 132 aa0.41□□□□□ -2.34
PMS1-203ENST00000409593 RNASE3P12724 160 aaKnown RBP0.41□□□□□ -2.34
PMS1-203ENST00000409593 NDUFA5Q16718 116 aa0.41□□□□□ -2.34
PMS1-203ENST00000409593 XAGE1AQ9HD64 81 aa0.41□□□□□ -2.34
PMS1-203ENST00000409593 OR5AC2Q9NZP5 309 aa0.41□□□□□ -2.34
PMS1-203ENST00000409593 TP53TG1Q9Y2A0 90 aa0.41□□□□□ -2.34
PMS1-203ENST00000409593 SMARCA4P51532 1647 aa0.41□□□□□ -2.34
PMS1-203ENST00000409593 TRBV6-7A0A0A0MS04 114 aa0.4□□□□□ -2.34
PMS1-203ENST00000409593 TRBV10-2A0A0K0K1G8 114 aa0.4□□□□□ -2.34
PMS1-203ENST00000409593 ZNF879B4DU55 563 aa0.4□□□□□ -2.34
PMS1-203ENST00000409593 PHGR1C9JFL3 82 aa0.4□□□□□ -2.34
PMS1-203ENST00000409593 LEPROTO15243 131 aa0.4□□□□□ -2.34
PMS1-203ENST00000409593 APOMO95445 188 aa0.4□□□□□ -2.34
PMS1-203ENST00000409593 ORM1P02763 201 aa0.4□□□□□ -2.34
PMS1-203ENST00000409593 CSN1S1P47710 185 aa0.4□□□□□ -2.34
PMS1-203ENST00000409593 CLDN12P56749 244 aa0.4□□□□□ -2.34
PMS1-203ENST00000409593 OR2T27Q8NH04 317 aa0.4□□□□□ -2.34
PMS1-203ENST00000409593 ZNF75CPQ92670 426 aaPredicted RBP0.4□□□□□ -2.34
PMS1-203ENST00000409593 YIPF3Q9GZM5 350 aa0.4□□□□□ -2.34
PMS1-203ENST00000409593 CXorf21Q9HAI6 301 aa0.4□□□□□ -2.34
PMS1-203ENST00000409593 BAIAP2Q9UQB8 552 aa0.4□□□□□ -2.34
PMS1-203ENST00000409593 K7ERQ8 282 aa0.4□□□□□ -2.35
PMS1-203ENST00000409593 SLC22A1O15245 554 aa0.4□□□□□ -2.35
PMS1-203ENST00000409593 TOX3O15405 576 aaPredicted RBP0.4□□□□□ -2.35
PMS1-203ENST00000409593 RUNX1Q01196 453 aa0.4□□□□□ -2.35
PMS1-203ENST00000409593 ANGPT1Q15389 498 aa0.4□□□□□ -2.35
PMS1-203ENST00000409593 SSX8Q7RTT4 187 aa0.4□□□□□ -2.35
PMS1-203ENST00000409593 AQP3Q92482 292 aa0.4□□□□□ -2.35
PMS1-203ENST00000409593 SLC22A4Q9H015 551 aa0.4□□□□□ -2.35
PMS1-203ENST00000409593 MS4A6AQ9H2W1 248 aa0.4□□□□□ -2.35
PMS1-203ENST00000409593 SYNRGQ9UMZ2 1314 aa0.4□□□□□ -2.35
PMS1-203ENST00000409593 LRPPRCP42704 1394 aaKnown RBP0.4□□□□□ -2.35
PMS1-203ENST00000409593 GLI3P10071 1580 aa0.39□□□□□ -2.35
PMS1-203ENST00000409593 IRGMA1A4Y4 181 aa0.39□□□□□ -2.35
PMS1-203ENST00000409593 FTCDNL1E5RQL4 147 aa0.39□□□□□ -2.35
PMS1-203ENST00000409593 RAB13P51153 203 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms