RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 POLR3KQ9Y2Y1 108 aaPredicted RBP3□□□□□ -1.93
RTN4-208ENST00000404909 AKAP9Q99996 3911 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 MXRA5Q9NR99 2828 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 CENPVL3A0A0U1RRI6 287 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 RNF222A6NCQ9 220 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 CEBPZOSA8MTT3 80 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 E5RGE8 158 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 LY6LH3BQJ8 138 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 SYNGR2O43760 224 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 SLC25A17O43808 307 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 PITX3O75364 302 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 RRASP10301 218 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 SLC25A6P12236 298 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 MYOD1P15172 320 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 RPL12P30050 165 aaKnown RBP2.99□□□□□ -1.93
RTN4-208ENST00000404909 UBE2KP61086 200 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 ID3Q02535 119 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 TNFRSF9Q07011 255 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 TMEM65Q6PI78 240 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 ACOT7LQ6ZUV0 252 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 TMUB2Q71RG4 321 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 DYNAPQ8N1N2 210 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 TMEM217Q8N7C4 229 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 OSR1Q8TAX0 266 aaPredicted RBP2.99□□□□□ -1.93
RTN4-208ENST00000404909 ZDHHC16Q969W1 377 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 MBD6Q96DN6 1003 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 CLCC1Q96S66 551 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 SMIM3Q9BZL3 60 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 A0A096LNT2 108 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 A0A1W2PPI3 338 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 FAM24AA6NFZ4 105 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 TXNL1O43396 289 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 TMEM50AO95807 157 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 IGKV1D-33P01593 117 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 IGKV1-33P01594 117 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 P0C879 139 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 IGHV4-38-2P0DP08 117 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 CNTFRP26992 372 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 S100A11P31949 105 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 LOXL1Q08397 574 aaPredicted RBP2.99□□□□□ -1.93
RTN4-208ENST00000404909 PLGLAQ15195 96 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 TMEM249Q2WGJ8 235 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 MIDNQ504T8 468 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 GPR157Q5UAW9 335 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 CCDC144NLQ6NUI1 221 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 SETXQ7Z333 2677 aaKnown RBP2.99□□□□□ -1.93
RTN4-208ENST00000404909 BAHCC1Q9P281 2608 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 TRAV20A0A0B4J274 112 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 KANTRA0A1W2PQU2 76 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 NPFFO15130 113 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 CST7O76096 145 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 AVPP01185 164 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 HKR1P10072 659 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 RELBQ01201 579 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 OR2F1Q13607 317 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 OPCMLQ14982 345 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 MMDQ15546 238 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 TMEM177Q53S58 311 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 SPANXN5Q5MJ07 72 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 MINOS1Q5TGZ0 78 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 KRTAP1-3Q8IUG1 177 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 CIARTQ8N365 385 aaPredicted RBP2.99□□□□□ -1.93
RTN4-208ENST00000404909 OR2C3Q8N628 320 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 OR8H1Q8NGG4 311 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 C22orf15Q8WYQ4 148 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 AIFM2Q9BRQ8 373 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 ZNF471Q9BX82 626 aaPredicted RBP2.99□□□□□ -1.93
RTN4-208ENST00000404909 RBKSQ9H477 322 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 COA4Q9NYJ1 87 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 MINOS1-NBL1R4GNA1 71 aa2.99□□□□□ -1.93
RTN4-208ENST00000404909 SETD2Q9BYW2 2564 aaPredicted RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 A0A0D9SG52 128 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 TMEM238LA0A1B0GVL6 79 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 C15orf61A6NNL5 157 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 NCBP2LA6PVI3 153 aaKnown RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 ACTL6BO94805 426 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 VENTXO95231 258 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 SPDEFO95238 335 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 IGHV4-31P0DP07 118 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 C4BPBP20851 252 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 LGALS7P47929 136 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 HOXA1P49639 335 aaPredicted RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 RPL23AP62750 156 aaKnown RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 GNB1P62873 340 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 NHLH2Q02577 135 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 TMEM267Q0VDI3 215 aaPredicted RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 PJVKQ0ZLH3 352 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 CLINT1Q14677 625 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 VMA21Q3ZAQ7 101 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 PRSS57Q6UWY2 283 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 OR8H3Q8N146 312 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 DTD1Q8TEA8 209 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 RAB40CQ96S21 281 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 COMMD5Q9GZQ3 224 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 FBXL15Q9H469 300 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 HEYLQ9NQ87 328 aaPredicted RBP2.98□□□□□ -1.93
RTN4-208ENST00000404909 TPSG1Q9NRR2 321 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 PSENENQ9NZ42 101 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 HSPB7Q9UBY9 170 aa2.98□□□□□ -1.93
RTN4-208ENST00000404909 FAM96BQ9Y3D0 163 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms