RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 CD33P20138 364 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 KCNE5Q9UJ90 142 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 TNFSF18Q9UNG2 199 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 TRAV24A0A0B4J272 114 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 CXorf65A6NEN9 183 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 LEPROTL1O95214 131 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 TSPAN13O95857 204 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 COX6CP09669 75 aa11.7□□□□□ -0.54
VAPA-202ENST00000400000 TNFRSF18Q9Y5U5 241 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 ZNF415Q09FC8 603 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 TMEM106BQ9NUM4 274 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 SMAGPQ0VAQ4 97 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 C1orf162Q8NEQ5 155 aaPredicted RBP11.69□□□□□ -0.54
VAPA-202ENST00000400000 DNASE2BQ8WZ79 361 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 GALNT14Q96FL9 552 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 HEATR5BQ9P2D3 2071 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 FOXH1O75593 365 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 OR9G1Q8NH87 305 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 RAB24Q969Q5 203 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 FAM206AQ9NX38 181 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 TUBD1Q9UJT1 453 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 GGCTO75223 188 aaKnown RBP11.69□□□□□ -0.54
VAPA-202ENST00000400000 TMEM101Q96IK0 257 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 SFXN3Q9BWM7 321 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 A0A0U1RRA0 63 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 GAGE10A6NGK3 116 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 RAG2P55895 527 aa11.69□□□□□ -0.54
VAPA-202ENST00000400000 CIRBPQ14011 172 aaKnown RBP11.69□□□□□ -0.54
VAPA-202ENST00000400000 RNASEH2CQ8TDP1 164 aaKnown RBP11.69□□□□□ -0.54
VAPA-202ENST00000400000 STAG3L2P0CL84 134 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 CSRP2Q16527 193 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 DMRTA1Q5VZB9 504 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 DRAM1Q8N682 238 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 ZNF815PA8K554 130 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 PLP1P60201 277 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 TFF3Q07654 80 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 ZNF385CQ66K41 422 aaPredicted RBP11.68□□□□□ -0.54
VAPA-202ENST00000400000 H1FOOQ8IZA3 346 aaPredicted RBP11.68□□□□□ -0.54
VAPA-202ENST00000400000 SOX21Q9Y651 276 aaPredicted RBP11.68□□□□□ -0.54
VAPA-202ENST00000400000 PPIFP30405 207 aaKnown RBP11.68□□□□□ -0.54
VAPA-202ENST00000400000 C1QL2Q7Z5L3 287 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 BEND2Q8NDZ0 799 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 NABP2Q9BQ15 211 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 TCF19Q9Y242 345 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 QSER1Q2KHR3 1735 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 IGHV3-64A0A075B6Q5 118 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 CA11O75493 328 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 CECR9P0C854 216 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 NUDT10Q8NFP7 164 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 NUDT11Q96G61 164 aa11.68□□□□□ -0.54
VAPA-202ENST00000400000 ZNF107Q9UII5 783 aaPredicted RBP11.68□□□□□ -0.54
VAPA-202ENST00000400000 ZNF646O15015 1829 aaPredicted RBP11.67□□□□□ -0.54
VAPA-202ENST00000400000 SLC17A3O00476 420 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 HOXD4P09016 255 aaPredicted RBP11.67□□□□□ -0.54
VAPA-202ENST00000400000 HSPE1P61604 102 aaKnown RBP11.67□□□□□ -0.54
VAPA-202ENST00000400000 PPP1R27Q86WC6 154 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 COL4A5P29400 1685 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 COL18A1P39060 1754 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 DOCK3Q8IZD9 2030 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 IGLV1-36A0A0B4J1U3 117 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 CCL3L1P16619 93 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 MALP21145 153 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 WNT10AQ9GZT5 417 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 ARFGEF1Q9Y6D6 1849 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 FXYD7P58549 80 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 RPS11P62280 158 aaKnown RBP eCLIP11.67□□□□□ -0.54
VAPA-202ENST00000400000 CGAP01215 116 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 HLA-DQB1P01920 261 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 GZMMP51124 257 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 CLPPQ16740 277 aaPredicted RBP11.67□□□□□ -0.54
VAPA-202ENST00000400000 ZNF837Q96EG3 531 aaPredicted RBP11.67□□□□□ -0.54
VAPA-202ENST00000400000 B9A039 149 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 C8orf88P0DMB2 117 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 IGFBP2P18065 325 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 ZNF506Q5JVG8 444 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 STHQ8IWL8 128 aa11.67□□□□□ -0.54
VAPA-202ENST00000400000 IGHV3-73A0A0B4J1V6 119 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 VDAC2P45880 294 aaPredicted RBP11.66□□□□□ -0.54
VAPA-202ENST00000400000 SPSB4Q96A44 273 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 JKAMPQ9P055 326 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 UBR3Q6ZT12 1888 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 ZNF324BQ6AW86 544 aaPredicted RBP11.66□□□□□ -0.54
VAPA-202ENST00000400000 KIR2DL4Q99706 377 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 ABCA7Q8IZY2 2146 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 IGKV1D-43A0A0B4J1Z2 117 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 TSPOP30536 169 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 NPC2P61916 151 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 GDF15Q99988 308 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 ESPL1Q14674 2120 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 FAM74A7A6NL05 159 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 SIAH2O43255 324 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 TMEM95Q3KNT9 176 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 C5orf66Q9H5L9 145 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 CENPWQ5EE01 88 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 IMMP2LQ96T52 175 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 TMEM238LA0A1B0GVL6 79 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 A6NJY4 79 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 DNAL4O96015 105 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 SEC11BP0C7V7 166 aa11.66□□□□□ -0.54
VAPA-202ENST00000400000 FABP2P12104 132 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms