RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 CD5P06127 495 aa12.12□□□□□ -0.47
CAPN3-207ENST00000397200 IGHV1-8P0DP01 117 aa12.12□□□□□ -0.47
CAPN3-207ENST00000397200 GATA3P23771 443 aa12.12□□□□□ -0.47
CAPN3-207ENST00000397200 NFYBP25208 207 aa12.12□□□□□ -0.47
CAPN3-207ENST00000397200 G6PCP35575 357 aa12.12□□□□□ -0.47
CAPN3-207ENST00000397200 RAB7AP51149 207 aa12.12□□□□□ -0.47
CAPN3-207ENST00000397200 ERVFRD-1P60508 538 aa12.12□□□□□ -0.47
CAPN3-207ENST00000397200 ZNF816Q0VGE8 651 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-207ENST00000397200 C1orf122Q6ZSJ8 110 aa12.12□□□□□ -0.47
CAPN3-207ENST00000397200 Q8N7P7 452 aa12.12□□□□□ -0.47
CAPN3-207ENST00000397200 ZNF439Q8NDP4 499 aa12.12□□□□□ -0.47
CAPN3-207ENST00000397200 SUN5Q8TC36 379 aa12.12□□□□□ -0.47
CAPN3-207ENST00000397200 GNPNAT1Q96EK6 184 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-207ENST00000397200 FLNAP21333 2647 aaKnown RBP12.12□□□□□ -0.47
CAPN3-207ENST00000397200 TOX4O94842 621 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 ARHGDIBP52566 201 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 ZNF134P52741 427 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 UBE2KP61086 200 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 PAX8Q06710 450 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 OR2B11Q5JQS5 317 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 NCR3LG1Q68D85 454 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 TMEM14EPQ6UXP3 125 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 HAPLN4Q86UW8 402 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 DDB2Q92466 427 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 SCRT1Q9BWW7 348 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 PARD6GQ9BYG4 376 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-207ENST00000397200 MS4A7Q9GZW8 240 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-207ENST00000397200 SIRPDQ9H106 197 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 RBKSQ9H477 322 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 UQCC1Q9NVA1 299 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 PSENENQ9NZ42 101 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 H3BP45 60 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 KRASP01116 189 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 APOC3P02656 99 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 IAPPP10997 89 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 TMEM267Q0VDI3 215 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-207ENST00000397200 SPNS3Q6ZMD2 512 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 VMO1Q7Z5L0 202 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 NARS2Q96I59 477 aaKnown RBP12.11□□□□□ -0.47
CAPN3-207ENST00000397200 PCGF1Q9BSM1 259 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 ABHD14AQ9BUJ0 271 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 SEC11CQ9BY50 192 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 SIRT7Q9NRC8 400 aa12.11□□□□□ -0.47
CAPN3-207ENST00000397200 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-207ENST00000397200 HPRT1P00492 218 aa12.1□□□□□ -0.47
CAPN3-207ENST00000397200 OR8U8P0C7N1 319 aa12.1□□□□□ -0.47
CAPN3-207ENST00000397200 PRTN3P24158 256 aa12.1□□□□□ -0.47
CAPN3-207ENST00000397200 SNCAP37840 140 aa12.1□□□□□ -0.47
CAPN3-207ENST00000397200 KIR2DS2P43631 304 aa12.1□□□□□ -0.47
CAPN3-207ENST00000397200 CAMLGP49069 296 aa12.1□□□□□ -0.47
CAPN3-207ENST00000397200 ARL16Q0P5N6 197 aa12.1□□□□□ -0.47
CAPN3-207ENST00000397200 TMEM182Q6ZP80 229 aaPredicted RBP12.1□□□□□ -0.47
CAPN3-207ENST00000397200 TMEM217Q8N7C4 229 aa12.1□□□□□ -0.47
CAPN3-207ENST00000397200 TMEM133Q9H2Q1 129 aa12.1□□□□□ -0.47
CAPN3-207ENST00000397200 C7orf69Q9H7B7 122 aa12.1□□□□□ -0.47
CAPN3-207ENST00000397200 MARCH11A6NNE9 402 aa12.09□□□□□ -0.47
CAPN3-207ENST00000397200 CYSRT1A8MQ03 144 aa12.09□□□□□ -0.47
CAPN3-207ENST00000397200 RNASEK-C17orf49H0YIS7 233 aa12.09□□□□□ -0.47
CAPN3-207ENST00000397200 J3QLI3 93 aa12.09□□□□□ -0.47
CAPN3-207ENST00000397200 SLC31A2O15432 143 aa12.09□□□□□ -0.47
CAPN3-207ENST00000397200 DLX1P56177 255 aa12.09□□□□□ -0.47
CAPN3-207ENST00000397200 AKR1C1Q04828 323 aa12.09□□□□□ -0.47
CAPN3-207ENST00000397200 CT45A1Q5HYN5 189 aa12.09□□□□□ -0.47
CAPN3-207ENST00000397200 ATRAIDQ6UW56 229 aa12.09□□□□□ -0.47
CAPN3-207ENST00000397200 H2BFWTQ7Z2G1 175 aa12.09□□□□□ -0.47
CAPN3-207ENST00000397200 OR2G3Q8NGZ4 309 aa12.09□□□□□ -0.47
CAPN3-207ENST00000397200 CT45A3Q8NHU0 189 aa12.09□□□□□ -0.47
CAPN3-207ENST00000397200 R3HDM4Q96D70 268 aa12.09□□□□□ -0.47
CAPN3-207ENST00000397200 ZNF251Q9BRH9 671 aa12.09□□□□□ -0.47
CAPN3-207ENST00000397200 UNKLQ9H9P5 680 aaKnown RBP12.09□□□□□ -0.47
CAPN3-207ENST00000397200 OTOGQ6ZRI0 2925 aa12.09□□□□□ -0.47
CAPN3-207ENST00000397200 ZNF469Q96JG9 3925 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-207ENST00000397200 A0A1B0GW64 132 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 M0R1X1 148 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 TSPAN15O95858 294 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 IGHV3-7P01780 117 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 COX7A1P24310 79 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 FHITP49789 147 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 LINC00205P59089 165 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 HBG1P69891 147 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 HBG2P69892 147 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 PRB3Q04118 309 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-207ENST00000397200 PDLIM3Q53GG5 364 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-207ENST00000397200 UTF1Q5T230 341 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 DPPA3Q6W0C5 159 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 LFNGQ8NES3 379 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 OR13D1Q8NGV5 346 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 LEAP2Q969E1 77 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 TBX15Q96SF7 602 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 PSMG3Q9BT73 122 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-207ENST00000397200 TREM1Q9NP99 234 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 FAM96BQ9Y3D0 163 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 ABCA1O95477 2261 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 A0A087X0M5 115 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 A0A1B0GX30 115 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 PMS2P5A8MQ11 134 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 METTL15P1P0C7V9 234 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 HOXB4P17483 251 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-207ENST00000397200 GNG10P50151 68 aa12.08□□□□□ -0.48
CAPN3-207ENST00000397200 RUNX1Q01196 453 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms