RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 MAS1LP35410 378 aa12.96□□□□□ -0.33
AP1S3-202ENST00000396653 SUPT4H1P63272 117 aaKnown RBP12.96□□□□□ -0.33
AP1S3-202ENST00000396653 CX3CL1P78423 397 aa12.96□□□□□ -0.33
AP1S3-202ENST00000396653 NDPQ00604 133 aa12.96□□□□□ -0.33
AP1S3-202ENST00000396653 TRIM16LQ309B1 348 aa12.96□□□□□ -0.33
AP1S3-202ENST00000396653 SSX9Q7RTT3 188 aa12.96□□□□□ -0.33
AP1S3-202ENST00000396653 DMBX1Q8NFW5 382 aa12.96□□□□□ -0.33
AP1S3-202ENST00000396653 GLYATL2Q8WU03 294 aa12.96□□□□□ -0.33
AP1S3-202ENST00000396653 CHPT1Q8WUD6 406 aa12.96□□□□□ -0.33
AP1S3-202ENST00000396653 IL22RA2Q969J5 263 aa12.96□□□□□ -0.33
AP1S3-202ENST00000396653 SEC22AQ96IW7 307 aa12.96□□□□□ -0.33
AP1S3-202ENST00000396653 MDFIQ99750 246 aa12.96□□□□□ -0.33
AP1S3-202ENST00000396653 C20orf85Q9H1P6 137 aa12.96□□□□□ -0.33
AP1S3-202ENST00000396653 TMEM140Q9NV12 185 aa12.96□□□□□ -0.33
AP1S3-202ENST00000396653 FAM240BA0A1B0GVZ2 78 aa12.95□□□□□ -0.34
AP1S3-202ENST00000396653 FCN1O00602 326 aa12.95□□□□□ -0.34
AP1S3-202ENST00000396653 ATP6V0E1O15342 81 aa12.95□□□□□ -0.34
AP1S3-202ENST00000396653 CDS2O95674 445 aa12.95□□□□□ -0.34
AP1S3-202ENST00000396653 SRPXP78539 464 aa12.95□□□□□ -0.34
AP1S3-202ENST00000396653 SSBP2P81877 361 aaPredicted RBP12.95□□□□□ -0.34
AP1S3-202ENST00000396653 TMEM187Q14656 261 aa12.95□□□□□ -0.34
AP1S3-202ENST00000396653 SP6Q3SY56 376 aa12.95□□□□□ -0.34
AP1S3-202ENST00000396653 C12orf54Q6X4T0 127 aa12.95□□□□□ -0.34
AP1S3-202ENST00000396653 STPG2Q8N412 459 aa12.95□□□□□ -0.34
AP1S3-202ENST00000396653 KLHDC1Q8N7A1 406 aa12.95□□□□□ -0.34
AP1S3-202ENST00000396653 WIPF2Q8TF74 440 aaPredicted RBP12.95□□□□□ -0.34
AP1S3-202ENST00000396653 WFDC12Q8WWY7 111 aa12.95□□□□□ -0.34
AP1S3-202ENST00000396653 ARPC1AQ92747 370 aa12.95□□□□□ -0.34
AP1S3-202ENST00000396653 TMEM56Q96MV1 263 aa12.95□□□□□ -0.34
AP1S3-202ENST00000396653 CLCC1Q96S66 551 aa12.95□□□□□ -0.34
AP1S3-202ENST00000396653 GON7Q9BXV9 100 aa12.95□□□□□ -0.34
AP1S3-202ENST00000396653 ZNF430Q9H8G1 570 aaPredicted RBP12.95□□□□□ -0.34
AP1S3-202ENST00000396653 TMEM56-RWDD3S4R434 201 aa12.95□□□□□ -0.34
AP1S3-202ENST00000396653 LINC01548A6NM66 108 aa12.94□□□□□ -0.34
AP1S3-202ENST00000396653 UPK2O00526 184 aa12.94□□□□□ -0.34
AP1S3-202ENST00000396653 ARPC1BO15143 372 aaKnown RBP12.94□□□□□ -0.34
AP1S3-202ENST00000396653 KRASP01116 189 aa12.94□□□□□ -0.34
AP1S3-202ENST00000396653 G6PCP35575 357 aa12.94□□□□□ -0.34
AP1S3-202ENST00000396653 RPL8P62917 257 aaKnown RBP12.94□□□□□ -0.34
AP1S3-202ENST00000396653 PJVKQ0ZLH3 352 aa12.94□□□□□ -0.34
AP1S3-202ENST00000396653 FXYD3Q14802 87 aa12.94□□□□□ -0.34
AP1S3-202ENST00000396653 SGMS2Q8NHU3 365 aa12.94□□□□□ -0.34
AP1S3-202ENST00000396653 ENKURQ8TC29 256 aa12.94□□□□□ -0.34
AP1S3-202ENST00000396653 RBPMSQ93062 196 aaKnown RBP12.94□□□□□ -0.34
AP1S3-202ENST00000396653 ALX4Q9H161 411 aaPredicted RBP12.94□□□□□ -0.34
AP1S3-202ENST00000396653 PARP11Q9NR21 331 aa12.94□□□□□ -0.34
AP1S3-202ENST00000396653 FLVCR2Q9UPI3 526 aa12.94□□□□□ -0.34
AP1S3-202ENST00000396653 NUBP2Q9Y5Y2 271 aa12.94□□□□□ -0.34
AP1S3-202ENST00000396653 FBN1P35555 2871 aaKnown RBP12.94□□□□□ -0.34
AP1S3-202ENST00000396653 ACTL6BO94805 426 aa12.93□□□□□ -0.34
AP1S3-202ENST00000396653 SFT2D2O95562 160 aa12.93□□□□□ -0.34
AP1S3-202ENST00000396653 P0C879 139 aa12.93□□□□□ -0.34
AP1S3-202ENST00000396653 VDAC1P21796 283 aa12.93□□□□□ -0.34
AP1S3-202ENST00000396653 MECP2P51608 486 aaKnown RBP12.93□□□□□ -0.34
AP1S3-202ENST00000396653 AKR1C2P52895 323 aa12.93□□□□□ -0.34
AP1S3-202ENST00000396653 PPP1R1AQ13522 171 aa12.93□□□□□ -0.34
AP1S3-202ENST00000396653 TNXAQ16473 311 aa12.93□□□□□ -0.34
AP1S3-202ENST00000396653 H2BFWTQ7Z2G1 175 aa12.93□□□□□ -0.34
AP1S3-202ENST00000396653 FAM219AQ8IW50 185 aa12.93□□□□□ -0.34
AP1S3-202ENST00000396653 DUSP18Q8NEJ0 188 aa12.93□□□□□ -0.34
AP1S3-202ENST00000396653 LHFPL5Q8TAF8 219 aa12.93□□□□□ -0.34
AP1S3-202ENST00000396653 NUDT15Q9NV35 164 aa12.93□□□□□ -0.34
AP1S3-202ENST00000396653 DUXBA0A1W2PPF3 345 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 PSMB11A5LHX3 300 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 CNIH1O95406 144 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 IGKV1-5P01602 117 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 EGR2P11161 476 aaPredicted RBP12.92□□□□□ -0.34
AP1S3-202ENST00000396653 HLA-GP17693 338 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 VAMP1P23763 118 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 GNB1P62873 340 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 SLC35B1P78383 322 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 CFHR3Q02985 330 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 TMEM267Q0VDI3 215 aaPredicted RBP12.92□□□□□ -0.34
AP1S3-202ENST00000396653 C19orf54Q5BKX5 351 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 TET2Q6N021 2002 aaPredicted RBP12.92□□□□□ -0.34
AP1S3-202ENST00000396653 ZNF695Q8IW36 515 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 SELENOHQ8IZQ5 122 aaKnown RBP12.92□□□□□ -0.34
AP1S3-202ENST00000396653 LGI3Q8N145 548 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 COMMD1Q8N668 190 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 LRTM2Q8N967 370 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 ABHD5Q8WTS1 349 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 SRSF12Q8WXF0 261 aaKnown RBP12.92□□□□□ -0.34
AP1S3-202ENST00000396653 TMEM68Q96MH6 324 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 NOL4LQ96MY1 436 aaPredicted RBP12.92□□□□□ -0.34
AP1S3-202ENST00000396653 ZNF747Q9BV97 191 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 FBXO7Q9Y3I1 522 aa12.92□□□□□ -0.34
AP1S3-202ENST00000396653 COL6A5A8TX70 2615 aa12.91□□□□□ -0.34
AP1S3-202ENST00000396653 TRAV41A0A0B4J266 112 aa12.91□□□□□ -0.34
AP1S3-202ENST00000396653 A0A0B4J2A0 478 aa12.91□□□□□ -0.34
AP1S3-202ENST00000396653 C15orf61A6NNL5 157 aa12.91□□□□□ -0.34
AP1S3-202ENST00000396653 HAX1O00165 279 aa12.91□□□□□ -0.34
AP1S3-202ENST00000396653 SNAPC5O75971 98 aa12.91□□□□□ -0.34
AP1S3-202ENST00000396653 H2AFB2P0C5Z0 115 aa12.91□□□□□ -0.34
AP1S3-202ENST00000396653 OR4E1P0C645 316 aa12.91□□□□□ -0.34
AP1S3-202ENST00000396653 OR9G9P0C7N8 305 aa12.91□□□□□ -0.34
AP1S3-202ENST00000396653 ANXA7P20073 488 aaKnown RBP12.91□□□□□ -0.34
AP1S3-202ENST00000396653 AKIRIN2Q53H80 203 aa12.91□□□□□ -0.34
AP1S3-202ENST00000396653 TMEM268Q5VZI3 342 aa12.91□□□□□ -0.34
AP1S3-202ENST00000396653 THOC7Q6I9Y2 204 aaKnown RBP12.91□□□□□ -0.34
AP1S3-202ENST00000396653 CENPVQ7Z7K6 275 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms