RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 RPEQ96AT9 228 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 MAP1AP78559 2803 aaPredicted RBP10.22□□□□□ -0.77
TRIM39-204ENST00000396548 FAM24AA6NFZ4 105 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 KBTBD11O94819 623 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 EWSR1Q01844 656 aaKnown RBP eCLIP10.22□□□□□ -0.77
TRIM39-204ENST00000396548 THNSL2Q86YJ6 484 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 PDZD9Q8IXQ8 264 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 OR8H3Q8N146 312 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 TMEM252Q8N6L7 170 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 OR4A5Q8NH83 315 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 STOML3Q8TAV4 291 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 HARBI1Q96MB7 349 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 AIFM2Q9BRQ8 373 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 PTPN13Q12923 2485 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 SPG11Q96JI7 2443 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 OOSP1A8MZH6 123 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 H7C2Y5 167 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 TSC22D2O75157 780 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 VDAC2P45880 294 aaPredicted RBP10.22□□□□□ -0.77
TRIM39-204ENST00000396548 NHLH2Q02577 135 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 Q5PR19 223 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 SLC51BQ86UW2 128 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 PIP4P2Q8N4L2 257 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 ZNF680Q8NEM1 530 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 TMEM167AQ8TBQ9 72 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 ZDHHC16Q969W1 377 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 MS4A7Q9GZW8 240 aaPredicted RBP10.22□□□□□ -0.77
TRIM39-204ENST00000396548 WFDC1Q9HC57 220 aa10.22□□□□□ -0.77
TRIM39-204ENST00000396548 POLQO75417 2590 aa10.21□□□□□ -0.77
TRIM39-204ENST00000396548 IGHV3-72A0A0B4J1Y9 119 aa10.21□□□□□ -0.77
TRIM39-204ENST00000396548 B4DSR2 109 aa10.21□□□□□ -0.77
TRIM39-204ENST00000396548 TIMM23O14925 209 aa10.21□□□□□ -0.77
TRIM39-204ENST00000396548 SHOXO15266 292 aa10.21□□□□□ -0.77
TRIM39-204ENST00000396548 CD1BP29016 333 aa10.21□□□□□ -0.77
TRIM39-204ENST00000396548 CEACAM3P40198 252 aa10.21□□□□□ -0.77
TRIM39-204ENST00000396548 SPCS3P61009 180 aa10.21□□□□□ -0.77
TRIM39-204ENST00000396548 CLEC9AQ6UXN8 241 aa10.21□□□□□ -0.77
TRIM39-204ENST00000396548 ITGB1BP2Q9UKP3 347 aa10.21□□□□□ -0.77
TRIM39-204ENST00000396548 ZNF257Q9Y2Q1 563 aa10.21□□□□□ -0.77
TRIM39-204ENST00000396548 VENTXO95231 258 aa10.21□□□□□ -0.78
TRIM39-204ENST00000396548 PVALBP20472 110 aaPredicted RBP10.21□□□□□ -0.78
TRIM39-204ENST00000396548 LGALS7P47929 136 aa10.21□□□□□ -0.78
TRIM39-204ENST00000396548 OR4A16Q8NH70 328 aa10.21□□□□□ -0.78
TRIM39-204ENST00000396548 RNF5Q99942 180 aa10.21□□□□□ -0.78
TRIM39-204ENST00000396548 ABCA12Q86UK0 2595 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 KANTRA0A1W2PQU2 76 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 PMS2P5A8MQ11 134 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 WRBO00258 174 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 MED6O75586 246 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 MYOD1P15172 320 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 EBI3Q14213 229 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 SMUG1Q53HV7 270 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 TMEM14EPQ6UXP3 125 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 MOB3BQ86TA1 216 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 HAPLN4Q86UW8 402 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 STPG2Q8N412 459 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 REG4Q9BYZ8 158 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 FBXL17Q9UF56 701 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 TAAR5O14804 337 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 IAPPP10997 89 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 PAX6P26367 422 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 CNTFRP26992 372 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 NUP62P37198 522 aaPredicted RBP10.2□□□□□ -0.78
TRIM39-204ENST00000396548 Q8N6K4 173 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 MALSU1Q96EH3 234 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 ARV1Q9H2C2 271 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 HILPDAQ9Y5L2 63 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 TRAV20A0A0B4J274 112 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 A0A1W2PRD5 423 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 A0A1W2PRF3 423 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 A0A1W2PRM7 423 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 CGB1A6NKQ9 187 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 EXOSC2Q13868 293 aaKnown RBP10.2□□□□□ -0.78
TRIM39-204ENST00000396548 LINC01356Q8N9X3 169 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 DTD1Q8TEA8 209 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 ST8SIA2Q92186 375 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 OR4C12Q96R67 309 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 PSENENQ9NZ42 101 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 CACFD1Q9UGQ2 172 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 PRNDQ9UKY0 176 aa10.2□□□□□ -0.78
TRIM39-204ENST00000396548 TEX50A0A1B0GTY4 177 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 NPFFO15130 113 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 HSPE1P61604 102 aaKnown RBP10.19□□□□□ -0.78
TRIM39-204ENST00000396548 RPS16P62249 146 aaKnown RBP10.19□□□□□ -0.78
TRIM39-204ENST00000396548 VAMP2P63027 116 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 BAXQ07812 192 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 PSG5Q15238 335 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 ZNF767PQ75MW2 155 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 TEX45Q8NA69 505 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 TPSG1Q9NRR2 321 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 TCF19Q9Y242 345 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 A0A1B0GW64 132 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 RNF223E7ERA6 249 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 AVPP01185 164 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 GATA3P23771 443 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 SAA4P35542 130 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 RPL23AP62750 156 aaKnown RBP10.19□□□□□ -0.78
TRIM39-204ENST00000396548 UBA52P62987 128 aaKnown RBP10.19□□□□□ -0.78
TRIM39-204ENST00000396548 ARL16Q0P5N6 197 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 NPBQ8NG41 125 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms