RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 SLC38A11Q08AI6 406 aa11.46□□□□□ -0.57
CDC42SE2-202ENST00000395246 ZNF726P1Q15940 193 aa11.46□□□□□ -0.57
CDC42SE2-202ENST00000395246 MRPL20Q9BYC9 149 aaKnown RBP11.46□□□□□ -0.57
CDC42SE2-202ENST00000395246 A0A1W2PPI3 338 aa11.46□□□□□ -0.58
CDC42SE2-202ENST00000395246 NDUFS8O00217 210 aa11.46□□□□□ -0.58
CDC42SE2-202ENST00000395246 CRYGCP07315 174 aa11.46□□□□□ -0.58
CDC42SE2-202ENST00000395246 CAMLGP49069 296 aa11.46□□□□□ -0.58
CDC42SE2-202ENST00000395246 ERVK-16P61578 105 aa11.46□□□□□ -0.58
CDC42SE2-202ENST00000395246 Q6ZRG5 221 aa11.46□□□□□ -0.58
CDC42SE2-202ENST00000395246 CLEC7AQ9BXN2 247 aa11.46□□□□□ -0.58
CDC42SE2-202ENST00000395246 TEX50A0A1B0GTY4 177 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 GPX4P36969 197 aaPredicted RBP11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 TAGLN2P37802 199 aaKnown RBP11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 OPRK1P41145 380 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 PRRX1P54821 245 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 ERVFRD-1P60508 538 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 CITED4Q96RK1 184 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 KIAA2026Q5HYC2 2103 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 TSPAN9O75954 239 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 IGKV1-16P04430 117 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 NDUFB7P17568 137 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 MINOS1Q5TGZ0 78 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 LYG1Q8N1E2 194 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 ABHD12Q8N2K0 398 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 RHOVQ96L33 236 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 MINOS1-NBL1R4GNA1 71 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 TRAV3A0A0B4J244 114 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 B8ZZF3 427 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 WRBO00258 174 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 PPIAL4GP0DN37 164 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 CD1BP29016 333 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 P2RX4Q99571 388 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 SLC35D1Q9NTN3 355 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 POLEQ07864 2286 aa11.45□□□□□ -0.58
CDC42SE2-202ENST00000395246 C22orf46C9J442 243 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 I3L521 148 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 C1QL1O75973 258 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 HBE1P02100 147 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 SRSF3P84103 164 aaKnown RBP11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 DEFB108BQ8NET1 73 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 CACNG8Q8WXS5 425 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 ZDHHC16Q969W1 377 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 RNASEK-C17orf49H0YIS7 233 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 HSPB1P04792 205 aaKnown RBP11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 CLDND2Q8NHS1 167 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 TIMD4Q96H15 378 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 URB1O60287 2271 aaKnown RBP11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 SAA1P0DJI8 122 aaPredicted RBP11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 OR2B8PP59922 312 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 LMO4P61968 165 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 SSBP2P81877 361 aaPredicted RBP11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 PRR20EP86478 221 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 PRR20CP86479 221 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 PRR20DP86480 221 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 PRR20BP86481 221 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 PRR20AP86496 221 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 TMEM190Q8WZ59 177 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 NPCDR1Q9BY65 106 aa11.44□□□□□ -0.58
CDC42SE2-202ENST00000395246 OR4A16Q8NH70 328 aa11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 TUBA4BQ9H853 241 aa11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 TBL2Q9Y4P3 447 aaKnown RBP11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 CST7O76096 145 aa11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 IFNA5P01569 189 aa11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 APOA2P02652 100 aa11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 TMEM267Q0VDI3 215 aaPredicted RBP11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 CLEC9AQ6UXN8 241 aa11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 THAP8Q8NA92 274 aa11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 OR10P1Q8NGE3 313 aa11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 RNASEH2CQ8TDP1 164 aaKnown RBP11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 PCNPQ8WW12 178 aaKnown RBP11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 LHX4Q969G2 390 aa11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 CACNA1DQ01668 2161 aa11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 PSMB11A5LHX3 300 aa11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 LEAP2Q969E1 77 aa11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 SSBP3Q9BWW4 388 aaPredicted RBP11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 OR51B2Q9Y5P1 312 aa11.43□□□□□ -0.58
CDC42SE2-202ENST00000395246 IGHV1-3A0A0C4DH29 117 aa11.42□□□□□ -0.58
CDC42SE2-202ENST00000395246 hCG_1809904A0A1W2PP81 198 aa11.42□□□□□ -0.58
CDC42SE2-202ENST00000395246 A0A1W2PPE2 198 aa11.42□□□□□ -0.58
CDC42SE2-202ENST00000395246 A0A1W2PR64 198 aa11.42□□□□□ -0.58
CDC42SE2-202ENST00000395246 A0A1W2PRV1 198 aa11.42□□□□□ -0.58
CDC42SE2-202ENST00000395246 METTL15P1P0C7V9 234 aa11.42□□□□□ -0.58
CDC42SE2-202ENST00000395246 RNASE2P10153 161 aaKnown RBP11.42□□□□□ -0.58
CDC42SE2-202ENST00000395246 RPL29P47914 159 aaKnown RBP11.42□□□□□ -0.58
CDC42SE2-202ENST00000395246 COMPP49747 757 aaPredicted RBP11.42□□□□□ -0.58
CDC42SE2-202ENST00000395246 KHDC3LQ587J8 217 aa11.42□□□□□ -0.58
CDC42SE2-202ENST00000395246 NARFLQ9H6Q4 476 aa11.42□□□□□ -0.58
CDC42SE2-202ENST00000395246 UBR5O95071 2799 aaPredicted RBP11.42□□□□□ -0.58
CDC42SE2-202ENST00000395246 C9JQL5 133 aa11.42□□□□□ -0.58
CDC42SE2-202ENST00000395246 TREML4Q6UXN2 200 aa11.42□□□□□ -0.58
CDC42SE2-202ENST00000395246 A0A1W2PN81 502 aa11.41□□□□□ -0.58
CDC42SE2-202ENST00000395246 CRYZL1O95825 349 aa11.41□□□□□ -0.58
CDC42SE2-202ENST00000395246 CHRNA7P36544 502 aa11.41□□□□□ -0.58
CDC42SE2-202ENST00000395246 LDLRAD2Q5SZI1 272 aa11.41□□□□□ -0.58
CDC42SE2-202ENST00000395246 TPTE2P1Q5T6R2 138 aa11.41□□□□□ -0.58
CDC42SE2-202ENST00000395246 FLYWCH2Q96CP2 140 aaKnown RBP11.41□□□□□ -0.58
CDC42SE2-202ENST00000395246 SMIM3Q9BZL3 60 aa11.41□□□□□ -0.58
CDC42SE2-202ENST00000395246 CEP295Q9C0D2 2601 aa11.41□□□□□ -0.58
CDC42SE2-202ENST00000395246 IAPPP10997 89 aa11.41□□□□□ -0.58
CDC42SE2-202ENST00000395246 ZNF48Q96MX3 618 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms