RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 ATF4P18848 351 aaPredicted RBP9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 REG1BP48304 166 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 ARL16Q0P5N6 197 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 Q8N7P7 452 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 MARC2Q969Z3 335 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 TSNAXQ99598 290 aaKnown RBP9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 SH3BGRL3Q9H299 93 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 BET1LQ9NYM9 111 aa9.3□□□□□ -0.92
SMARCAL1-203ENST00000392128 ZFYVE26Q68DK2 2539 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 SRRM4A7MD48 611 aaKnown RBP9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 H7C2Y5 167 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 SCAF4O95104 1147 aaKnown RBP9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 IGHV2-5P01817 119 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 ARG1P05089 322 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 FGF2P09038 288 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 ATP6V0CP27449 155 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 RAB5CP51148 216 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 RAB13P51153 203 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 ZNF525Q8N782 197 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 OR4C13Q8NGP0 309 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 FLYWCH2Q96CP2 140 aaKnown RBP9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 GNPNAT1Q96EK6 184 aaPredicted RBP9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 WASHC3Q9Y3C0 194 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 AMMECR1Q9Y4X0 333 aaPredicted RBP9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 ZNF98A6NK75 572 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 PMS2P5A8MQ11 134 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 BUB1B-PAK6H3BSN5 160 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 UPK2O00526 184 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 SNAPINO95295 136 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 MC5RP33032 325 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 BLOC1S1P78537 153 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 SPINK9Q5DT21 86 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 PUSL1Q8N0Z8 303 aaKnown RBP9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 LHX4Q969G2 390 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 HARBI1Q96MB7 349 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 CLCC1Q96S66 551 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 PARD6GQ9BYG4 376 aaPredicted RBP9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 PARP11Q9NR21 331 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 PRNDQ9UKY0 176 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 TCF19Q9Y242 345 aa9.29□□□□□ -0.92
SMARCAL1-203ENST00000392128 USP9XQ93008 2570 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-203ENST00000392128 A8MXK9 166 aa9.28□□□□□ -0.92
SMARCAL1-203ENST00000392128 NUDT19A8MXV4 375 aa9.28□□□□□ -0.92
SMARCAL1-203ENST00000392128 IFNA5P01569 189 aa9.28□□□□□ -0.92
SMARCAL1-203ENST00000392128 IGHV4-39P01824 125 aa9.28□□□□□ -0.92
SMARCAL1-203ENST00000392128 VDAC2P45880 294 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-203ENST00000392128 DLX1P56177 255 aa9.28□□□□□ -0.92
SMARCAL1-203ENST00000392128 HSPE1P61604 102 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-203ENST00000392128 TOR2AQ5JU69 321 aa9.28□□□□□ -0.92
SMARCAL1-203ENST00000392128 C1orf122Q6ZSJ8 110 aa9.28□□□□□ -0.92
SMARCAL1-203ENST00000392128 KIR3DL3Q8N743 410 aa9.28□□□□□ -0.92
SMARCAL1-203ENST00000392128 OR4P4Q8NGL7 312 aa9.28□□□□□ -0.92
SMARCAL1-203ENST00000392128 CCL19Q99731 98 aa9.28□□□□□ -0.92
SMARCAL1-203ENST00000392128 ZNF257Q9Y2Q1 563 aa9.28□□□□□ -0.92
SMARCAL1-203ENST00000392128 FLNCQ14315 2725 aa9.28□□□□□ -0.92
SMARCAL1-203ENST00000392128 TEX46H3BTG2 121 aa9.27□□□□□ -0.92
SMARCAL1-203ENST00000392128 I3L521 148 aa9.27□□□□□ -0.92
SMARCAL1-203ENST00000392128 GATCO43716 136 aaKnown RBP9.27□□□□□ -0.92
SMARCAL1-203ENST00000392128 SAA1P0DJI8 122 aaPredicted RBP9.27□□□□□ -0.92
SMARCAL1-203ENST00000392128 COX7A1P24310 79 aa9.27□□□□□ -0.92
SMARCAL1-203ENST00000392128 RPP30P78346 268 aaKnown RBP9.27□□□□□ -0.92
SMARCAL1-203ENST00000392128 SRSF1Q07955 248 aaKnown RBP eCLIP9.27□□□□□ -0.92
SMARCAL1-203ENST00000392128 SLC38A11Q08AI6 406 aa9.27□□□□□ -0.92
SMARCAL1-203ENST00000392128 ATP6V1FQ16864 119 aa9.27□□□□□ -0.92
SMARCAL1-203ENST00000392128 OR11H6Q8NGC7 330 aa9.27□□□□□ -0.92
SMARCAL1-203ENST00000392128 PINX1Q96BK5 328 aaKnown RBP9.27□□□□□ -0.92
SMARCAL1-203ENST00000392128 HIPK2Q9H2X6 1198 aa9.27□□□□□ -0.92
SMARCAL1-203ENST00000392128 ZNF462Q96JM2 2506 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 C15orf62A8K5M9 175 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 OR8U8P0C7N1 319 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 PRTN3P24158 256 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 PDLIM4P50479 330 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 ARF6P62330 175 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 OR8G2PQ6IF36 304 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 PNKDQ8N490 385 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 OR10P1Q8NGE3 313 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 OR2G3Q8NGZ4 309 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 OR4A5Q8NH83 315 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 RBMXL1Q96E39 390 aaKnown RBP9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 BPESC1Q9GZL8 116 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 MMP26Q9NRE1 261 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 FKBP11Q9NYL4 201 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 OR51B2Q9Y5P1 312 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 ARHGAP32A7KAX9 2087 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 EPG5Q9HCE0 2579 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 SVEP1Q4LDE5 3571 aa9.27□□□□□ -0.93
SMARCAL1-203ENST00000392128 RAB19A4D1S5 217 aa9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 UMAD1C9J7I0 102 aa9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 LY6LH3BQJ8 138 aa9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 ENSAO43768 121 aaKnown RBP9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 KBTBD11O94819 623 aa9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 LRRC75BQ2VPJ9 315 aa9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 SLC25A24Q6NUK1 477 aa9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 Q6ZRG5 221 aa9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 LYPD6BQ8NI32 183 aa9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 VSTM2AQ8TAG5 236 aa9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 SCGB1C1Q8TD33 95 aa9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 HEYLQ9NQ87 328 aaPredicted RBP9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 IGHV1-3A0A0C4DH29 117 aa9.26□□□□□ -0.93
SMARCAL1-203ENST00000392128 CLN5O75503 358 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms