RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 DNAJC30Q96LL9 226 aa4.52□□□□□ -1.69
ERCC4-202ENST00000389138 MND1Q9BWT6 205 aa4.52□□□□□ -1.69
ERCC4-202ENST00000389138 FAIMQ9NVQ4 179 aa4.52□□□□□ -1.69
ERCC4-202ENST00000389138 ZNF224Q9NZL3 707 aa4.52□□□□□ -1.69
ERCC4-202ENST00000389138 IL36RNQ9UBH0 155 aa4.52□□□□□ -1.69
ERCC4-202ENST00000389138 LSM2Q9Y333 95 aaKnown RBP4.52□□□□□ -1.69
ERCC4-202ENST00000389138 ALPK2Q86TB3 2170 aa4.52□□□□□ -1.69
ERCC4-202ENST00000389138 SHANK1Q9Y566 2161 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 A6NDN8 102 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 J3QT63 122 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 SLC17A3O00476 420 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 HMGB3O15347 200 aaKnown RBP4.51□□□□□ -1.69
ERCC4-202ENST00000389138 MRPS14O60783 128 aaKnown RBP4.51□□□□□ -1.69
ERCC4-202ENST00000389138 MRPL3P09001 348 aaKnown RBP4.51□□□□□ -1.69
ERCC4-202ENST00000389138 LIFP15018 202 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 RAB3AP20336 220 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 BTCP35070 178 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 GPR6P46095 362 aaPredicted RBP4.51□□□□□ -1.69
ERCC4-202ENST00000389138 ZNF136P52737 540 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 LMO4P61968 165 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 RRAS2P62070 204 aaPredicted RBP4.51□□□□□ -1.69
ERCC4-202ENST00000389138 RPS25P62851 125 aaKnown RBP4.51□□□□□ -1.69
ERCC4-202ENST00000389138 ZNF616Q08AN1 781 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 FOXI1Q12951 378 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 GAGE5Q13069 117 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 GAGE6Q13070 117 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 P2RY6Q15077 328 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 TGIF1Q15583 401 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 Q6ZN92 141 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 OR4C6Q8NH72 309 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 ZFAND1Q8TCF1 268 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 BLNKQ8WV28 456 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 S100ZQ8WXG8 99 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 FAAP24Q9BTP7 215 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 ISG20L2Q9H9L3 353 aaKnown RBP4.51□□□□□ -1.69
ERCC4-202ENST00000389138 CALML5Q9NZT1 146 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 MRPL27Q9P0M9 148 aaKnown RBP4.51□□□□□ -1.69
ERCC4-202ENST00000389138 LY6G6EA0A0G2JKS1 128 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 ZNF850A8MQ14 1090 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 C10orf142B7Z368 130 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 TNFSF12O43508 249 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 CRLF1O75462 422 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 LALBAP00709 142 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 IFNA10P01566 189 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 GYPBP06028 91 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 EIF4EP06730 217 aaKnown RBP4.51□□□□□ -1.69
ERCC4-202ENST00000389138 CELA2AP08217 269 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 TSPAN19P0C672 248 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 SULT1A3P0DMM9 295 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 SULT1A4P0DMN0 295 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 PIPP12273 146 aaPredicted RBP4.51□□□□□ -1.69
ERCC4-202ENST00000389138 SPNP16150 400 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 TCN2P20062 427 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 PUDPQ08623 228 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 C1DQ13901 141 aaKnown RBP4.51□□□□□ -1.69
ERCC4-202ENST00000389138 OR2B11Q5JQS5 317 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 ZCCHC24Q8N2G6 241 aaKnown RBP4.51□□□□□ -1.69
ERCC4-202ENST00000389138 SLC25A45Q8N413 288 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 OR10G7Q8NGN6 311 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 PIK3IP1Q96FE7 263 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 PRSS27Q9BQR3 290 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 TCEAL7Q9BRU2 100 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 MED29Q9NX70 200 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 U3KQA8 63 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 SDK2Q58EX2 2172 aa4.51□□□□□ -1.69
ERCC4-202ENST00000389138 SAA2-SAA4A0A096LPE2 208 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 IGHV5-51A0A0C4DH38 117 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 RBFOX3A6NFN3 312 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 C17orf51A8MQB3 221 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 REM1O75628 298 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 KCNK2O95069 426 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 CDRT1O95170 752 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 MOSP00540 346 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 CSF3P09919 207 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 CD34P28906 385 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 FXYD6P3P58550 94 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 GNG5P63218 68 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 HNRNPA0Q13151 305 aaKnown RBP4.5□□□□□ -1.69
ERCC4-202ENST00000389138 ZNF620Q6ZNG0 422 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 TMPPEQ6ZT21 453 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 C1orf158Q8N1D5 194 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 FTMTQ8N4E7 242 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 OR10D3Q8NH80 312 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.5□□□□□ -1.69
ERCC4-202ENST00000389138 ACOT12Q8WYK0 555 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 FMC1Q96HJ9 113 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 REEP6Q96HR9 211 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 RNF126Q9BV68 326 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 OR52D1Q9H346 318 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 NDUFB11Q9NX14 153 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 HIVEP3Q5T1R4 2406 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 CACNA1CQ13936 2221 aa4.5□□□□□ -1.69
ERCC4-202ENST00000389138 A0A0G2JRQ6 117 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 A0A1B0GXF2 115 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 TRAPPC13A5PLN9 417 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 C8orf87E5RJ46 101 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 UPK1BO75841 260 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 PPP1R3DO95685 299 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 TTRP02766 147 aa4.49□□□□□ -1.69
ERCC4-202ENST00000389138 DBIP07108 87 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms