RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 SLC35B1P78383 322 aa12.68□□□□□ -0.38
SNRPB-201ENST00000381342 CFHR3Q02985 330 aa12.68□□□□□ -0.38
SNRPB-201ENST00000381342 FXYD3Q14802 87 aa12.68□□□□□ -0.38
SNRPB-201ENST00000381342 C10orf55Q5SWW7 151 aa12.68□□□□□ -0.38
SNRPB-201ENST00000381342 OR4A47Q6IF82 309 aa12.68□□□□□ -0.38
SNRPB-201ENST00000381342 NDUFA11Q86Y39 141 aa12.68□□□□□ -0.38
SNRPB-201ENST00000381342 TCTEX1D1Q8N7M0 179 aa12.68□□□□□ -0.38
SNRPB-201ENST00000381342 CCDC71LQ8N9Z2 235 aa12.68□□□□□ -0.38
SNRPB-201ENST00000381342 VSTM2AQ8TAG5 236 aa12.68□□□□□ -0.38
SNRPB-201ENST00000381342 DEDD2Q8WXF8 326 aa12.68□□□□□ -0.38
SNRPB-201ENST00000381342 OR2A7Q96R45 310 aa12.68□□□□□ -0.38
SNRPB-201ENST00000381342 TP53RKQ96S44 253 aa12.68□□□□□ -0.38
SNRPB-201ENST00000381342 RTBDNQ9BSG5 229 aaPredicted RBP12.68□□□□□ -0.38
SNRPB-201ENST00000381342 CCDC32Q9BV29 185 aa12.68□□□□□ -0.38
SNRPB-201ENST00000381342 C5orf66Q9H5L9 145 aa12.68□□□□□ -0.38
SNRPB-201ENST00000381342 ZNF580Q9UK33 172 aa12.68□□□□□ -0.38
SNRPB-201ENST00000381342 GPR132Q9UNW8 380 aa12.68□□□□□ -0.38
SNRPB-201ENST00000381342 A0A1W2PRX2 142 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 MARCH11A6NNE9 402 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 H0Y980 276 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 NQO2P16083 231 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 ERVK-16P61578 105 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 POU2AF1Q16633 256 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 C19orf54Q5BKX5 351 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 KHDC1LQ5JSQ8 128 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 LCNL1Q6ZST4 164 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 MMD2Q8IY49 270 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 DMBX1Q8NFW5 382 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 OR4F17Q8NGA8 305 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 TMEM167AQ8TBQ9 72 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 OR4F4Q96R69 305 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 GON7Q9BXV9 100 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 PALMDQ9NP74 551 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 TMEM140Q9NV12 185 aa12.67□□□□□ -0.38
SNRPB-201ENST00000381342 C3orf85A0A1B0GTC6 90 aa12.66□□□□□ -0.38
SNRPB-201ENST00000381342 CREBL2O60519 120 aaPredicted RBP12.66□□□□□ -0.38
SNRPB-201ENST00000381342 IGKV1-39P01597 117 aa12.66□□□□□ -0.38
SNRPB-201ENST00000381342 OPN1MWP04001 364 aa12.66□□□□□ -0.38
SNRPB-201ENST00000381342 IGKV1D-39P04432 117 aa12.66□□□□□ -0.38
SNRPB-201ENST00000381342 OPN1MW2P0DN77 364 aa12.66□□□□□ -0.38
SNRPB-201ENST00000381342 OPN1MW3P0DN78 364 aa12.66□□□□□ -0.38
SNRPB-201ENST00000381342 G6PCP35575 357 aa12.66□□□□□ -0.38
SNRPB-201ENST00000381342 DCTN2Q13561 401 aaKnown RBP12.66□□□□□ -0.38
SNRPB-201ENST00000381342 UNQ5815/PRO19632Q6UWF5 114 aa12.66□□□□□ -0.38
SNRPB-201ENST00000381342 ADAD2Q8NCV1 583 aaKnown RBP12.66□□□□□ -0.38
SNRPB-201ENST00000381342 AIFM2Q9BRQ8 373 aa12.66□□□□□ -0.38
SNRPB-201ENST00000381342 FAM212BQ9NTI7 297 aaPredicted RBP12.66□□□□□ -0.38
SNRPB-201ENST00000381342 BET1LQ9NYM9 111 aa12.66□□□□□ -0.38
SNRPB-201ENST00000381342 TRAV3A0A0B4J244 114 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 TEX13DA0A0J9YY54 714 aaPredicted RBP12.65□□□□□ -0.38
SNRPB-201ENST00000381342 A0A1W2PN81 502 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 TCRBV4S1A1TA0A5B7 111 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 CRYM-AS1A6NIL9 109 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 ADARB2-AS1A8MUL3 147 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 WIPF1O43516 503 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 ACTL6BO94805 426 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 KRASP01116 189 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 IGHG4P01861 327 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 SERPINE2P07093 398 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 APELAP0DMC3 54 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 MYOD1P15172 320 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 PPIFP30405 207 aaKnown RBP12.65□□□□□ -0.38
SNRPB-201ENST00000381342 CHRNA7P36544 502 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 CCR6P51684 374 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 CD83Q01151 205 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 SP6Q3SY56 376 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 LFNGQ8NES3 379 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 SRSF12Q8WXF0 261 aaKnown RBP12.65□□□□□ -0.38
SNRPB-201ENST00000381342 TMEM230Q96A57 120 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 NAA60Q9H7X0 242 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 FOXA2Q9Y261 457 aaPredicted RBP12.65□□□□□ -0.38
SNRPB-201ENST00000381342 NUBP2Q9Y5Y2 271 aa12.65□□□□□ -0.38
SNRPB-201ENST00000381342 SOX15O60248 233 aa12.64□□□□□ -0.39
SNRPB-201ENST00000381342 RPLP1P05386 114 aaKnown RBP12.64□□□□□ -0.39
SNRPB-201ENST00000381342 OR5AC1P0C628 307 aa12.64□□□□□ -0.39
SNRPB-201ENST00000381342 BTCP35070 178 aa12.64□□□□□ -0.39
SNRPB-201ENST00000381342 RPL8P62917 257 aaKnown RBP12.64□□□□□ -0.39
SNRPB-201ENST00000381342 FOXE3Q13461 319 aa12.64□□□□□ -0.39
SNRPB-201ENST00000381342 ASPHD1Q5U4P2 390 aa12.64□□□□□ -0.39
SNRPB-201ENST00000381342 TEX38Q6PEX7 206 aa12.64□□□□□ -0.39
SNRPB-201ENST00000381342 COMMD1Q8N668 190 aa12.64□□□□□ -0.39
SNRPB-201ENST00000381342 MINDY2Q8NBR6 621 aa12.64□□□□□ -0.39
SNRPB-201ENST00000381342 OR4A5Q8NH83 315 aa12.64□□□□□ -0.39
SNRPB-201ENST00000381342 CASTOR1Q8WTX7 329 aa12.64□□□□□ -0.39
SNRPB-201ENST00000381342 SCGB3A2Q96PL1 93 aa12.64□□□□□ -0.39
SNRPB-201ENST00000381342 PHB2Q99623 299 aa12.64□□□□□ -0.39
SNRPB-201ENST00000381342 VWFP04275 2813 aa12.64□□□□□ -0.39
SNRPB-201ENST00000381342 NAP1L6A6NFF2 107 aa12.63□□□□□ -0.39
SNRPB-201ENST00000381342 UPK2O00526 184 aa12.63□□□□□ -0.39
SNRPB-201ENST00000381342 UPK1BO75841 260 aa12.63□□□□□ -0.39
SNRPB-201ENST00000381342 OR9G9P0C7N8 305 aa12.63□□□□□ -0.39
SNRPB-201ENST00000381342 PF4V1P10720 104 aa12.63□□□□□ -0.39
SNRPB-201ENST00000381342 AKR1C4P17516 323 aa12.63□□□□□ -0.39
SNRPB-201ENST00000381342 HLA-GP17693 338 aa12.63□□□□□ -0.39
SNRPB-201ENST00000381342 PSMB8P28062 276 aa12.63□□□□□ -0.39
SNRPB-201ENST00000381342 RPL27AP46776 148 aaKnown RBP12.63□□□□□ -0.39
SNRPB-201ENST00000381342 TMEM267Q0VDI3 215 aaPredicted RBP12.63□□□□□ -0.39
SNRPB-201ENST00000381342 TRIM16LQ309B1 348 aa12.63□□□□□ -0.39
SNRPB-201ENST00000381342 AKIRIN2Q53H80 203 aa12.63□□□□□ -0.39
SNRPB-201ENST00000381342 CXorf66Q5JRM2 361 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms