RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 RAB22AQ9UL26 194 aa12.06□□□□□ -0.48
VCX3A-201ENST00000381089 TRBV6-7A0A0A0MS04 114 aa12.05□□□□□ -0.48
VCX3A-201ENST00000381089 TRBV9A0A0B4J1U6 114 aa12.05□□□□□ -0.48
VCX3A-201ENST00000381089 C2orf70A6NJV1 201 aa12.05□□□□□ -0.48
VCX3A-201ENST00000381089 GGCTO75223 188 aaKnown RBP12.05□□□□□ -0.48
VCX3A-201ENST00000381089 RBMXL2O75526 392 aaKnown RBP12.05□□□□□ -0.48
VCX3A-201ENST00000381089 PRH1P02810 166 aa12.05□□□□□ -0.48
VCX3A-201ENST00000381089 C15orf32Q32M92 178 aa12.05□□□□□ -0.48
VCX3A-201ENST00000381089 IDO2Q6ZQW0 420 aa12.05□□□□□ -0.48
VCX3A-201ENST00000381089 WFDC10AQ9H1F0 79 aa12.05□□□□□ -0.48
VCX3A-201ENST00000381089 ATG5Q9H1Y0 275 aa12.05□□□□□ -0.48
VCX3A-201ENST00000381089 COMMD3Q9UBI1 195 aa12.05□□□□□ -0.48
VCX3A-201ENST00000381089 ETV7Q9Y603 341 aa12.05□□□□□ -0.48
VCX3A-201ENST00000381089 LGALS9O00182 355 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 LY6G6CO95867 125 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 FCGR3AP08637 254 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 GSTT2P0CG29 244 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 GSTT2BP0CG30 244 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 RAB6AP20340 208 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 CDK10Q15131 360 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 ANKRD55Q3KP44 614 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 IGSF11Q5DX21 431 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 PLAC9Q5JTB6 97 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 MMD2Q8IY49 270 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 TTC9CQ8N5M4 171 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 SAMD12Q8N8I0 201 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 DYNC2LI1Q8TCX1 351 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 SLC25A38Q96DW6 304 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 RAB3CQ96E17 227 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 GGTLC1Q9BX51 225 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 RHBDL2Q9NX52 303 aa12.04□□□□□ -0.48
VCX3A-201ENST00000381089 A0A075B6Q4 140 aa12.03□□□□□ -0.48
VCX3A-201ENST00000381089 CXorf65A6NEN9 183 aa12.03□□□□□ -0.48
VCX3A-201ENST00000381089 NUPR2A6NF83 97 aa12.03□□□□□ -0.48
VCX3A-201ENST00000381089 OR2J3O76001 311 aa12.03□□□□□ -0.48
VCX3A-201ENST00000381089 ZNF182P17025 639 aaPredicted RBP12.03□□□□□ -0.48
VCX3A-201ENST00000381089 DUTP33316 252 aaKnown RBP12.03□□□□□ -0.48
VCX3A-201ENST00000381089 ZNF45Q02386 682 aa12.03□□□□□ -0.48
VCX3A-201ENST00000381089 MRGPRG-AS1Q2M3A8 158 aa12.03□□□□□ -0.48
VCX3A-201ENST00000381089 ZNF57Q68EA5 555 aaPredicted RBP12.03□□□□□ -0.48
VCX3A-201ENST00000381089 OR52B4Q8NGK2 314 aa12.03□□□□□ -0.48
VCX3A-201ENST00000381089 AP3S1Q92572 193 aa12.03□□□□□ -0.48
VCX3A-201ENST00000381089 WDR89Q96FK6 387 aaPredicted RBP12.03□□□□□ -0.48
VCX3A-201ENST00000381089 ST6GALNAC5Q9BVH7 336 aa12.03□□□□□ -0.48
VCX3A-201ENST00000381089 ZNF430Q9H8G1 570 aaPredicted RBP12.03□□□□□ -0.48
VCX3A-201ENST00000381089 CCDC59Q9P031 241 aaKnown RBP12.03□□□□□ -0.48
VCX3A-201ENST00000381089 NDUFA13Q9P0J0 144 aa12.03□□□□□ -0.48
VCX3A-201ENST00000381089 SPATA2Q9UM82 520 aa12.03□□□□□ -0.48
VCX3A-201ENST00000381089 ZNF257Q9Y2Q1 563 aa12.03□□□□□ -0.48
VCX3A-201ENST00000381089 LOC102724200A0A096LPH7 203 aaPredicted RBP12.02□□□□□ -0.49
VCX3A-201ENST00000381089 METTL21EPA6NDL7 271 aa12.02□□□□□ -0.49
VCX3A-201ENST00000381089 PPP5D1E7EU14 171 aa12.02□□□□□ -0.49
VCX3A-201ENST00000381089 ZNF701M0R085 212 aaPredicted RBP12.02□□□□□ -0.49
VCX3A-201ENST00000381089 DHFRP00374 187 aa12.02□□□□□ -0.49
VCX3A-201ENST00000381089 SAA1P0DJI8 122 aaPredicted RBP12.02□□□□□ -0.49
VCX3A-201ENST00000381089 TALDO1P37837 337 aa12.02□□□□□ -0.49
VCX3A-201ENST00000381089 FAM106AQ4KMX7 169 aa12.02□□□□□ -0.49
VCX3A-201ENST00000381089 GPHB5Q86YW7 130 aa12.02□□□□□ -0.49
VCX3A-201ENST00000381089 DDB2Q92466 427 aa12.02□□□□□ -0.49
VCX3A-201ENST00000381089 C5orf30Q96GV9 206 aa12.02□□□□□ -0.49
VCX3A-201ENST00000381089 MRPS7Q9Y2R9 242 aaKnown RBP12.02□□□□□ -0.49
VCX3A-201ENST00000381089 PRELID3BQ9Y3B1 194 aa12.02□□□□□ -0.49
VCX3A-201ENST00000381089 HPGDSO60760 199 aa12.01□□□□□ -0.49
VCX3A-201ENST00000381089 TMEM127O75204 238 aa12.01□□□□□ -0.49
VCX3A-201ENST00000381089 NDUFB8O95169 186 aa12.01□□□□□ -0.49
VCX3A-201ENST00000381089 OR2C1O95371 312 aa12.01□□□□□ -0.49
VCX3A-201ENST00000381089 EIF4EP06730 217 aaKnown RBP12.01□□□□□ -0.49
VCX3A-201ENST00000381089 CBLN1P23435 193 aa12.01□□□□□ -0.49
VCX3A-201ENST00000381089 ARL3P36405 182 aa12.01□□□□□ -0.49
VCX3A-201ENST00000381089 SCAND1P57086 179 aa12.01□□□□□ -0.49
VCX3A-201ENST00000381089 UBE2NLQ5JXB2 153 aa12.01□□□□□ -0.49
VCX3A-201ENST00000381089 OR4A47Q6IF82 309 aa12.01□□□□□ -0.49
VCX3A-201ENST00000381089 OR10R2Q8NGX6 335 aa12.01□□□□□ -0.49
VCX3A-201ENST00000381089 VSTM2AQ8TAG5 236 aa12.01□□□□□ -0.49
VCX3A-201ENST00000381089 DGCR14Q96DF8 476 aaKnown RBP12.01□□□□□ -0.49
VCX3A-201ENST00000381089 FBXL7Q9UJT9 491 aa12.01□□□□□ -0.49
VCX3A-201ENST00000381089 ZNF320A2RRD8 509 aa12□□□□□ -0.49
VCX3A-201ENST00000381089 LINC00473A8K010 186 aa12□□□□□ -0.49
VCX3A-201ENST00000381089 RAB27BO00194 218 aa12□□□□□ -0.49
VCX3A-201ENST00000381089 FCGR3BO75015 233 aa12□□□□□ -0.49
VCX3A-201ENST00000381089 HLA-AP01891 365 aaKnown RBP12□□□□□ -0.49
VCX3A-201ENST00000381089 GNB3P16520 340 aa12□□□□□ -0.49
VCX3A-201ENST00000381089 PMS2P11Q13670 270 aa12□□□□□ -0.49
VCX3A-201ENST00000381089 MZT2AQ6P582 158 aa12□□□□□ -0.49
VCX3A-201ENST00000381089 OVOL2Q9BRP0 275 aa12□□□□□ -0.49
VCX3A-201ENST00000381089 C6orf62Q9GZU0 229 aaPredicted RBP12□□□□□ -0.49
VCX3A-201ENST00000381089 KCNK7Q9Y2U2 307 aa12□□□□□ -0.49
VCX3A-201ENST00000381089 A6NHS1 94 aa11.99□□□□□ -0.49
VCX3A-201ENST00000381089 NPIPB5A8MRT5 1133 aa11.99□□□□□ -0.49
VCX3A-201ENST00000381089 FAM25AB3EWG3 89 aa11.99□□□□□ -0.49
VCX3A-201ENST00000381089 FAM25CB3EWG5 89 aa11.99□□□□□ -0.49
VCX3A-201ENST00000381089 FAM25GB3EWG6 89 aa11.99□□□□□ -0.49
VCX3A-201ENST00000381089 RGS5O15539 181 aa11.99□□□□□ -0.49
VCX3A-201ENST00000381089 SLC22A5O76082 557 aa11.99□□□□□ -0.49
VCX3A-201ENST00000381089 HIST1H1DP16402 221 aaKnown RBP11.99□□□□□ -0.49
VCX3A-201ENST00000381089 ARFRP1Q13795 201 aa11.99□□□□□ -0.49
VCX3A-201ENST00000381089 C10orf55Q5SWW7 151 aa11.99□□□□□ -0.49
VCX3A-201ENST00000381089 KCTD9Q7L273 389 aa11.99□□□□□ -0.49
VCX3A-201ENST00000381089 H1FOOQ8IZA3 346 aaPredicted RBP11.99□□□□□ -0.49
VCX3A-201ENST00000381089 TMEM61Q8N0U2 210 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms