RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 HIST1H2BDP58876 126 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 HIST1H2BCP62807 126 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 LCN2P80188 198 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 HIST2H2BEQ16778 126 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 HIST1H2BHQ93079 126 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 ZNF524Q96C55 264 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 HIST1H2BNQ99877 126 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 HIST1H2BMQ99879 126 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 AHRRA9YTQ3 701 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 CD82P27701 267 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 TFF3Q07654 80 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 GSX1Q9H4S2 264 aaPredicted RBP10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 LRRK1Q38SD2 2015 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 SELENOTP62341 195 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 RPL8P62917 257 aaKnown RBP10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 KIAA1644Q3SXP7 199 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 ATP1A1-AS1Q5TC04 95 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 PLPPR1Q8TBJ4 325 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 CBLN4Q9NTU7 201 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 HEATR1Q9H583 2144 aaKnown RBP10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 GCHFRP30047 84 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 PSG7Q13046 419 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 COL5A1-AS1Q5SY13 56 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 Q6ZT83 130 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 MMD2Q8IY49 270 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 ZNF596Q8TC21 504 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 GP6Q9HCN6 339 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 ASCL3Q9NQ33 180 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 THYN1Q9P016 225 aa10.76□□□□□ -0.69
DNMT3A-204ENST00000380756 A0A1B0GV90 55 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 CBLN1P23435 193 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 FXYD3Q14802 87 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 DEPPQ9NTK1 212 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 MRPS18CQ9Y3D5 142 aaKnown RBP10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 TRAV24A0A0B4J272 114 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 TEX50A0A1B0GTY4 177 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 C16orf97H3BN30 126 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 WISP1O95388 367 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 PLAUP00749 431 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 C8orf88P0DMB2 117 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 ZNRF1Q8ND25 227 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 ELOVL1Q9BW60 279 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 PPIAL4EA0A075B759 164 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 A8MWL6 223 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 FAM157AC9JC47 383 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 PPIAL4DF5H284 164 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 IFNL4K9M1U5 179 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 PPIAL4FP0DN26 164 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 LYL1P12980 280 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 OTX1P32242 354 aaPredicted RBP10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 ZNF137PP52743 207 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 RPL23P62829 140 aaKnown RBP10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 C11orf42Q8N5U0 333 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 STPG3Q8N7X2 389 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 RASL11BQ9BPW5 248 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 MS4A5Q9H3V2 200 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 FOXJ2Q9P0K8 574 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 AMMECR1Q9Y4X0 333 aaPredicted RBP10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 PPIAL4AQ9Y536 164 aa10.75□□□□□ -0.69
DNMT3A-204ENST00000380756 IGHV3-21A0A0B4J1V1 117 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 NABP2Q9BQ15 211 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 PPIHO43447 177 aaKnown RBP10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 HYPMO75409 117 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 CD99P14209 185 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 ACP1P24666 158 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 CEACAM3P40198 252 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 ACP7Q6ZNF0 438 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 OR4B1Q8NGF8 309 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 SFXN3Q9BWM7 321 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 FAM87AP0C7U9 286 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 LHX2P50458 406 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 RPL39P5Q59GN2 51 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 C19orf35Q6ZS72 473 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 OR13A1Q8NGR1 328 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 ZNF714Q96N38 554 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 GNG7O60262 68 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 RIGQ13278 110 aa10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 ZCCHC14Q8WYQ9 949 aaKnown RBP10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 ZNF71Q9NQZ8 489 aaPredicted RBP10.74□□□□□ -0.69
DNMT3A-204ENST00000380756 BMPR1BO00238 502 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 CLDN18P56856 261 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 MST1LQ2TV78 715 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 NHLRC2Q8NBF2 726 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 MAP1LC3CQ9BXW4 147 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 DNAJC4Q9NNZ3 241 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 WASHC3Q9Y3C0 194 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 RFNGQ9Y644 331 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 CD3EP07766 207 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 CD55P08174 381 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 SRIP30626 198 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 RPL27AP46776 148 aaKnown RBP10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 ATP5G3P48201 142 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 DCTN5Q9BTE1 182 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 ZNF581Q9P0T4 197 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 A0A1W2PRD5 423 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 A0A1W2PRF3 423 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 A0A1W2PRM7 423 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 RRHO14718 337 aa10.73□□□□□ -0.69
DNMT3A-204ENST00000380756 CEACAM1P13688 526 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms