RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 TGIF2LXQ8IUE1 241 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 OR10P1Q8NGE3 313 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 PINX1Q96BK5 328 aaKnown RBP12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 SSBP3Q9BWW4 388 aaPredicted RBP12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 CLEC7AQ9BXN2 247 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 WDR61Q9GZS3 305 aaKnown RBP12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 BET1LQ9NYM9 111 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 PRNDQ9UKY0 176 aa12.5□□□□□ -0.41
RAB3IP-204ENST00000378815 hCG_1809904A0A1W2PP81 198 aa12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 A0A1W2PPE2 198 aa12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 A0A1W2PR64 198 aa12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 A0A1W2PRV1 198 aa12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 GPR6P46095 362 aaPredicted RBP12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 PRRX1P54821 245 aa12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 SRSF3P84103 164 aaKnown RBP12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 ZNF616Q08AN1 781 aa12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 PUSL1Q8N0Z8 303 aaKnown RBP12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 BEND2Q8NDZ0 799 aa12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 LHX4Q969G2 390 aa12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 CLCC1Q96S66 551 aa12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 HIPK2Q9H2X6 1198 aa12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 OVOL3O00110 214 aa12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 SCAF4O95104 1147 aaKnown RBP12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 SAA1P0DJI8 122 aaPredicted RBP12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 OR4C13Q8NGP0 309 aa12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 FAM213BQ8TBF2 198 aa12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 FLYWCH2Q96CP2 140 aaKnown RBP12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 HARBI1Q96MB7 349 aa12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 PSMG3Q9BT73 122 aaPredicted RBP12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 TMEM147Q9BVK8 224 aa12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 NARFLQ9H6Q4 476 aa12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 HEYLQ9NQ87 328 aaPredicted RBP12.49□□□□□ -0.41
RAB3IP-204ENST00000378815 DOCK11Q5JSL3 2073 aa12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 RNF224P0DH78 156 aa12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 RPP30P78346 268 aaKnown RBP12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 VWC2Q2TAL6 325 aa12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 Q8N7P7 452 aa12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 RSG1Q9BU20 258 aa12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 ONECUT1Q9UBC0 465 aa12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 ZNF257Q9Y2Q1 563 aa12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 WASHC3Q9Y3C0 194 aa12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 LOC105371242A0A075B767 164 aa12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 UBE2L5PA0A1B0GUS4 154 aa12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 TSPAN15O95858 294 aa12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 MC5RP33032 325 aa12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 HOXA1P49639 335 aaPredicted RBP12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 RAB13P51153 203 aa12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 PRB3Q04118 309 aaPredicted RBP12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 TAF15Q92804 592 aaKnown RBP eCLIP12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 FBXO7Q9Y3I1 522 aa12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 OR51B2Q9Y5P1 312 aa12.48□□□□□ -0.41
RAB3IP-204ENST00000378815 BUB1B-PAK6H3BSN5 160 aa12.47□□□□□ -0.41
RAB3IP-204ENST00000378815 KBTBD11O94819 623 aa12.47□□□□□ -0.41
RAB3IP-204ENST00000378815 RPS16P62249 146 aaKnown RBP12.47□□□□□ -0.41
RAB3IP-204ENST00000378815 AKR1C1Q04828 323 aa12.47□□□□□ -0.41
RAB3IP-204ENST00000378815 AKR1C8PQ5T2L2 129 aa12.47□□□□□ -0.41
RAB3IP-204ENST00000378815 COMMD1Q8N668 190 aa12.47□□□□□ -0.41
RAB3IP-204ENST00000378815 IGFBPL1Q8WX77 278 aa12.47□□□□□ -0.41
RAB3IP-204ENST00000378815 UQCC1Q9NVA1 299 aa12.47□□□□□ -0.41
RAB3IP-204ENST00000378815 M0R1W7 72 aa12.47□□□□□ -0.41
RAB3IP-204ENST00000378815 AGPAT2O15120 278 aa12.47□□□□□ -0.41
RAB3IP-204ENST00000378815 IFNA10P01566 189 aa12.47□□□□□ -0.41
RAB3IP-204ENST00000378815 DPPA3Q6W0C5 159 aa12.47□□□□□ -0.41
RAB3IP-204ENST00000378815 ZNF843Q8N446 348 aa12.47□□□□□ -0.41
RAB3IP-204ENST00000378815 OR4P4Q8NGL7 312 aa12.47□□□□□ -0.41
RAB3IP-204ENST00000378815 TMEM170AQ8WVE7 144 aa12.47□□□□□ -0.41
RAB3IP-204ENST00000378815 TMEM218A2RU14 115 aa12.46□□□□□ -0.41
RAB3IP-204ENST00000378815 RRHO14718 337 aa12.46□□□□□ -0.41
RAB3IP-204ENST00000378815 MYOD1P15172 320 aa12.46□□□□□ -0.41
RAB3IP-204ENST00000378815 COX7A1P24310 79 aa12.46□□□□□ -0.41
RAB3IP-204ENST00000378815 TLE4Q04727 773 aa12.46□□□□□ -0.41
RAB3IP-204ENST00000378815 CENPVQ7Z7K6 275 aaPredicted RBP12.46□□□□□ -0.41
RAB3IP-204ENST00000378815 NARS2Q96I59 477 aaKnown RBP12.46□□□□□ -0.41
RAB3IP-204ENST00000378815 FKBP11Q9NYL4 201 aa12.46□□□□□ -0.41
RAB3IP-204ENST00000378815 KLF2Q9Y5W3 355 aaPredicted RBP12.46□□□□□ -0.41
RAB3IP-204ENST00000378815 PRSS46E5RG02 174 aa12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 IGLV2-23P01705 113 aa12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 MDKP21741 143 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 SNCAP37840 140 aa12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 SERF2P84101 59 aa12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 PRCDQ00LT1 54 aa12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 OR5B3Q8NH48 314 aa12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 MS4A7Q9GZW8 240 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 FAM96BQ9Y3D0 163 aa12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 TIMM9Q9Y5J7 89 aa12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 TEX50A0A1B0GTY4 177 aa12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 CD5P06127 495 aa12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 ARF6P62330 175 aa12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 PNKDQ8N490 385 aa12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 OR4A5Q8NH83 315 aa12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 TMEM231Q9H6L2 316 aa12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 AMMECR1Q9Y4X0 333 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 TET2Q6N021 2002 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-204ENST00000378815 RNASEK-C17orf49H0YIS7 233 aa12.44□□□□□ -0.42
RAB3IP-204ENST00000378815 LY6LH3BQJ8 138 aa12.44□□□□□ -0.42
RAB3IP-204ENST00000378815 IGHV2-5P01817 119 aa12.44□□□□□ -0.42
RAB3IP-204ENST00000378815 SP5Q6BEB4 398 aaPredicted RBP12.44□□□□□ -0.42
RAB3IP-204ENST00000378815 ETV3LQ6ZN32 361 aa12.44□□□□□ -0.42
RAB3IP-204ENST00000378815 VSTM2AQ8TAG5 236 aa12.44□□□□□ -0.42
RAB3IP-204ENST00000378815 TMEM167AQ8TBQ9 72 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms