RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 NECAP2Q9NVZ3 263 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 TRAV9-2A0A087WT02 112 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 ZNF850A8MQ14 1090 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 PATE4P0C8F1 98 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 PMCHP20382 165 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 AAED1Q7RTV5 226 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 SUMF1Q8NBK3 374 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 OR10P1Q8NGE3 313 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 OR10D3Q8NH80 312 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 RAB1CQ92928 201 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 C5orf30Q96GV9 206 aa13.06□□□□□ -0.32
FXN-201ENST00000377270 SSSCA1O60232 199 aa13.05□□□□□ -0.32
FXN-201ENST00000377270 CELA3AP09093 270 aa13.05□□□□□ -0.32
FXN-201ENST00000377270 NRN1LQ496H8 165 aa13.05□□□□□ -0.32
FXN-201ENST00000377270 NCKAP5O14513 1909 aa13.05□□□□□ -0.32
FXN-201ENST00000377270 A4D1N5 150 aa13.05□□□□□ -0.32
FXN-201ENST00000377270 ZNF207O43670 478 aaKnown RBP13.05□□□□□ -0.32
FXN-201ENST00000377270 B4GALT1P15291 398 aa13.05□□□□□ -0.32
FXN-201ENST00000377270 YPEL3P61236 119 aaPredicted RBP13.05□□□□□ -0.32
FXN-201ENST00000377270 EIF3IQ13347 325 aaKnown RBP13.05□□□□□ -0.32
FXN-201ENST00000377270 CDCP2Q5VXM1 449 aa13.05□□□□□ -0.32
FXN-201ENST00000377270 BRICD5Q6PL45 260 aa13.05□□□□□ -0.32
FXN-201ENST00000377270 ODF3L1Q8IXM7 274 aa13.05□□□□□ -0.32
FXN-201ENST00000377270 RNF183Q96D59 192 aa13.05□□□□□ -0.32
FXN-201ENST00000377270 STRADBQ9C0K7 418 aa13.05□□□□□ -0.32
FXN-201ENST00000377270 KIAA1549Q9HCM3 1950 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 C7orf71A4D174 169 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 PINLYPA6NC86 204 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 MPPED1O15442 326 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 GYPAP02724 150 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 FAM87AP0C7U9 286 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 TLE1Q04724 770 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 MEF2CQ06413 473 aaPredicted RBP13.04□□□□□ -0.32
FXN-201ENST00000377270 IGFBP7Q16270 282 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 RNFT1Q5M7Z0 435 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 SPINK14Q6IE38 97 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 C12orf54Q6X4T0 127 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 FAM58AQ8N1B3 248 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 K7EP34 96 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 SYNGR3O43761 229 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 CRYGSP22914 178 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 PRSS12P56730 875 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 PMCHL1Q16048 86 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 OR1F12Q8NHA8 337 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 C10orf35Q96D05 121 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 REPIN1Q9BWE0 567 aaKnown RBP13.04□□□□□ -0.32
FXN-201ENST00000377270 GPR179Q6PRD1 2367 aa13.04□□□□□ -0.32
FXN-201ENST00000377270 AHCTF1Q8WYP5 2266 aa13.03□□□□□ -0.32
FXN-201ENST00000377270 ZNF32P17041 273 aa13.03□□□□□ -0.32
FXN-201ENST00000377270 CBLN1P23435 193 aa13.03□□□□□ -0.32
FXN-201ENST00000377270 Q6ZSR3 168 aa13.03□□□□□ -0.32
FXN-201ENST00000377270 PERPQ96FX8 193 aa13.03□□□□□ -0.32
FXN-201ENST00000377270 TMEM204Q9BSN7 226 aa13.03□□□□□ -0.32
FXN-201ENST00000377270 UFC1Q9Y3C8 167 aa13.03□□□□□ -0.32
FXN-201ENST00000377270 FUT6P51993 359 aa13.03□□□□□ -0.32
FXN-201ENST00000377270 MBD3L1Q8WWY6 194 aa13.03□□□□□ -0.32
FXN-201ENST00000377270 JMJD8Q96S16 334 aa13.03□□□□□ -0.32
FXN-201ENST00000377270 SPATA25Q9BR10 227 aa13.03□□□□□ -0.32
FXN-201ENST00000377270 MRPL16Q9NX20 251 aaKnown RBP13.03□□□□□ -0.32
FXN-201ENST00000377270 MTCH1Q9NZJ7 389 aa13.03□□□□□ -0.32
FXN-201ENST00000377270 FTH1P19P0C7X4 201 aa13.02□□□□□ -0.32
FXN-201ENST00000377270 CEACAM16Q2WEN9 425 aa13.02□□□□□ -0.32
FXN-201ENST00000377270 HAPLN4Q86UW8 402 aa13.02□□□□□ -0.32
FXN-201ENST00000377270 PLPPR1Q8TBJ4 325 aa13.02□□□□□ -0.32
FXN-201ENST00000377270 ABHD14BQ96IU4 210 aa13.02□□□□□ -0.32
FXN-201ENST00000377270 FOXB1Q99853 325 aa13.02□□□□□ -0.32
FXN-201ENST00000377270 RPRMQ9NS64 109 aa13.02□□□□□ -0.32
FXN-201ENST00000377270 NCOR1O75376 2440 aa13.02□□□□□ -0.33
FXN-201ENST00000377270 SIRPB1O00241 398 aa13.02□□□□□ -0.33
FXN-201ENST00000377270 PSG4Q00888 419 aa13.02□□□□□ -0.33
FXN-201ENST00000377270 Q0VG73 95 aa13.02□□□□□ -0.33
FXN-201ENST00000377270 COX19Q49B96 90 aa13.02□□□□□ -0.33
FXN-201ENST00000377270 SPIN2AQ99865 258 aa13.02□□□□□ -0.33
FXN-201ENST00000377270 SPIN2BQ9BPZ2 258 aa13.02□□□□□ -0.33
FXN-201ENST00000377270 DOCK10Q96BY6 2186 aa13.02□□□□□ -0.33
FXN-201ENST00000377270 PCSK5Q92824 1860 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 C1QTNF9BB2RNN3 333 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 C17orf112F2Z3M2 114 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 F2RL2O00254 374 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 TNFRSF13BO14836 293 aaPredicted RBP13.01□□□□□ -0.33
FXN-201ENST00000377270 S1PR2O95136 353 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 ZNF883P0CG24 379 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 CXorf66Q5JRM2 361 aaPredicted RBP13.01□□□□□ -0.33
FXN-201ENST00000377270 FGFBP3Q8TAT2 258 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 GALMQ96C23 342 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 RAB1BQ9H0U4 201 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 MRPL18Q9H0U6 180 aaKnown RBP13.01□□□□□ -0.33
FXN-201ENST00000377270 TAAR3PQ9P1P4 343 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 ANGPTL7O43827 346 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 TMEM50AO95807 157 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 CA2P00918 260 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 IFNA1P01562 189 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 ADH4P08319 380 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 OR10X1Q8NGY0 326 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 AP1S3Q96PC3 154 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 SPRY4Q9C004 299 aa13.01□□□□□ -0.33
FXN-201ENST00000377270 BOKQ9UMX3 212 aaPredicted RBP13.01□□□□□ -0.33
FXN-201ENST00000377270 COL27A1Q8IZC6 1860 aaPredicted RBP13.01□□□□□ -0.33
FXN-201ENST00000377270 SPRY1O43609 319 aaPredicted RBP13□□□□□ -0.33
FXN-201ENST00000377270 IGHV3-9P01782 118 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms