RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CHD8Q9HCK8 2581 aa16.61■□□□□ 0.25
VSX1-202ENST00000376709 hCG_1809904A0A1W2PP81 198 aa16.61■□□□□ 0.25
VSX1-202ENST00000376709 A0A1W2PR64 198 aa16.61■□□□□ 0.25
VSX1-202ENST00000376709 A0A1W2PRV1 198 aa16.61■□□□□ 0.25
VSX1-202ENST00000376709 TMEM178BH3BS89 294 aa16.61■□□□□ 0.25
VSX1-202ENST00000376709 HOXA1P49639 335 aaPredicted RBP16.61■□□□□ 0.25
VSX1-202ENST00000376709 SLC25A22Q9H936 323 aa16.61■□□□□ 0.25
VSX1-202ENST00000376709 CD1BP29016 333 aa16.61■□□□□ 0.25
VSX1-202ENST00000376709 PLA2G5P39877 138 aa16.61■□□□□ 0.25
VSX1-202ENST00000376709 AKR1D1P51857 326 aa16.61■□□□□ 0.25
VSX1-202ENST00000376709 PDLIM3Q53GG5 364 aaPredicted RBP16.61■□□□□ 0.25
VSX1-202ENST00000376709 OR4A47Q6IF82 309 aa16.61■□□□□ 0.25
VSX1-202ENST00000376709 SLC25A48Q6ZT89 311 aaKnown RBP16.61■□□□□ 0.25
VSX1-202ENST00000376709 RNASE6Q93091 150 aaKnown RBP16.61■□□□□ 0.25
VSX1-202ENST00000376709 SMCO3A2RU48 225 aa16.6■□□□□ 0.25
VSX1-202ENST00000376709 C15orf61A6NNL5 157 aa16.6■□□□□ 0.25
VSX1-202ENST00000376709 SHISA9B4DS77 424 aa16.6■□□□□ 0.25
VSX1-202ENST00000376709 HMGB3O15347 200 aaKnown RBP16.6■□□□□ 0.25
VSX1-202ENST00000376709 TAGLN2P37802 199 aaKnown RBP16.6■□□□□ 0.25
VSX1-202ENST00000376709 RPL35P42766 123 aaKnown RBP16.6■□□□□ 0.25
VSX1-202ENST00000376709 RAB5BP61020 215 aa16.6■□□□□ 0.25
VSX1-202ENST00000376709 TVP23CQ96ET8 276 aa16.6■□□□□ 0.25
VSX1-202ENST00000376709 TMEM106BQ9NUM4 274 aa16.6■□□□□ 0.25
VSX1-202ENST00000376709 VAX2Q9UIW0 290 aa16.6■□□□□ 0.25
VSX1-202ENST00000376709 TCF19Q9Y242 345 aa16.6■□□□□ 0.25
VSX1-202ENST00000376709 POLEQ07864 2286 aa16.6■□□□□ 0.25
VSX1-202ENST00000376709 CTXND1A0A1B0GTU2 59 aa16.6■□□□□ 0.25
VSX1-202ENST00000376709 VDAC2P45880 294 aaPredicted RBP16.6■□□□□ 0.25
VSX1-202ENST00000376709 CASP6P55212 293 aa16.6■□□□□ 0.25
VSX1-202ENST00000376709 DLK1P80370 383 aa16.6■□□□□ 0.25
VSX1-202ENST00000376709 MEF2CQ06413 473 aaPredicted RBP16.6■□□□□ 0.25
VSX1-202ENST00000376709 ATRXP46100 2492 aa16.59■□□□□ 0.25
VSX1-202ENST00000376709 RRHO14718 337 aa16.59■□□□□ 0.25
VSX1-202ENST00000376709 OR2C1O95371 312 aa16.59■□□□□ 0.25
VSX1-202ENST00000376709 HRASP01112 189 aa16.59■□□□□ 0.25
VSX1-202ENST00000376709 ERVFRD-1P60508 538 aa16.59■□□□□ 0.25
VSX1-202ENST00000376709 KLRB1Q12918 225 aa16.59■□□□□ 0.25
VSX1-202ENST00000376709 NCMAPQ5T1S8 102 aa16.59■□□□□ 0.25
VSX1-202ENST00000376709 LINC00518Q8N0U6 118 aa16.59■□□□□ 0.25
VSX1-202ENST00000376709 ZCCHC14Q8WYQ9 949 aaKnown RBP16.59■□□□□ 0.25
VSX1-202ENST00000376709 NEUROG1Q92886 237 aa16.59■□□□□ 0.25
VSX1-202ENST00000376709 C1orf196B1AJZ1 125 aa16.58■□□□□ 0.25
VSX1-202ENST00000376709 E7EQL1 145 aa16.58■□□□□ 0.25
VSX1-202ENST00000376709 MDKP21741 143 aaPredicted RBP16.58■□□□□ 0.25
VSX1-202ENST00000376709 RNF212Q495C1 297 aa16.58■□□□□ 0.25
VSX1-202ENST00000376709 RBMS3Q6XE24 437 aaKnown RBP16.58■□□□□ 0.25
VSX1-202ENST00000376709 SLC35E3Q7Z769 313 aa16.58■□□□□ 0.25
VSX1-202ENST00000376709 H1FXQ92522 213 aaKnown RBP16.58■□□□□ 0.25
VSX1-202ENST00000376709 ZNF714Q96N38 554 aa16.58■□□□□ 0.25
VSX1-202ENST00000376709 P2RX4Q99571 388 aa16.58■□□□□ 0.25
VSX1-202ENST00000376709 ACTR3CQ9C0K3 210 aaPredicted RBP16.58■□□□□ 0.25
VSX1-202ENST00000376709 ZNRD1Q9P1U0 126 aa16.58■□□□□ 0.25
VSX1-202ENST00000376709 RELNP78509 3460 aa16.58■□□□□ 0.25
VSX1-202ENST00000376709 RAB5AP20339 215 aa16.58■□□□□ 0.24
VSX1-202ENST00000376709 RTL8BQ17RB0 113 aa16.58■□□□□ 0.24
VSX1-202ENST00000376709 DMRTC2Q8IXT2 367 aaPredicted RBP16.58■□□□□ 0.24
VSX1-202ENST00000376709 ABHD12Q8N2K0 398 aa16.58■□□□□ 0.24
VSX1-202ENST00000376709 MS4A5Q9H3V2 200 aa16.58■□□□□ 0.24
VSX1-202ENST00000376709 WDR83OSQ9Y284 106 aa16.58■□□□□ 0.24
VSX1-202ENST00000376709 IFNA4P05014 189 aa16.57■□□□□ 0.24
VSX1-202ENST00000376709 CCL3L1P16619 93 aa16.57■□□□□ 0.24
VSX1-202ENST00000376709 FAM90A2PQ658T7 463 aa16.57■□□□□ 0.24
VSX1-202ENST00000376709 OR10A7Q8NGE5 316 aa16.57■□□□□ 0.24
VSX1-202ENST00000376709 CA5BP1Q8WTZ4 195 aa16.57■□□□□ 0.24
VSX1-202ENST00000376709 TMEM14BQ9NUH8 114 aa16.57■□□□□ 0.24
VSX1-202ENST00000376709 FOXA2Q9Y261 457 aaPredicted RBP16.57■□□□□ 0.24
VSX1-202ENST00000376709 NCOR2Q9Y618 2525 aa16.57■□□□□ 0.24
VSX1-202ENST00000376709 ZNF727A8MUV8 499 aa16.57■□□□□ 0.24
VSX1-202ENST00000376709 NDUFB3O43676 98 aa16.57■□□□□ 0.24
VSX1-202ENST00000376709 CT45A6P0DMU7 189 aa16.57■□□□□ 0.24
VSX1-202ENST00000376709 CT45A5P0DMU8 189 aa16.57■□□□□ 0.24
VSX1-202ENST00000376709 CT45A7P0DMV0 189 aa16.57■□□□□ 0.24
VSX1-202ENST00000376709 LRRC10Q5BKY1 277 aa16.57■□□□□ 0.24
VSX1-202ENST00000376709 ENY2Q9NPA8 101 aa16.57■□□□□ 0.24
VSX1-202ENST00000376709 SLC35D1Q9NTN3 355 aa16.57■□□□□ 0.24
VSX1-202ENST00000376709 C1QTNF9P0C862 333 aa16.56■□□□□ 0.24
VSX1-202ENST00000376709 CA7P43166 264 aa16.56■□□□□ 0.24
VSX1-202ENST00000376709 HSPE1P61604 102 aaKnown RBP16.56■□□□□ 0.24
VSX1-202ENST00000376709 ACOT6Q3I5F7 207 aaPredicted RBP16.56■□□□□ 0.24
VSX1-202ENST00000376709 TMEM200BQ69YZ2 307 aa16.56■□□□□ 0.24
VSX1-202ENST00000376709 HEPN1Q6WQI6 88 aa16.56■□□□□ 0.24
VSX1-202ENST00000376709 IQCF2Q8IXL9 164 aa16.56■□□□□ 0.24
VSX1-202ENST00000376709 OR13D1Q8NGV5 346 aa16.56■□□□□ 0.24
VSX1-202ENST00000376709 RAB24Q969Q5 203 aa16.56■□□□□ 0.24
VSX1-202ENST00000376709 GGACTQ9BVM4 153 aa16.56■□□□□ 0.24
VSX1-202ENST00000376709 TMPRSS5Q9H3S3 457 aa16.56■□□□□ 0.24
VSX1-202ENST00000376709 FAM90A27PA6NNH2 459 aa16.55■□□□□ 0.24
VSX1-202ENST00000376709 CYB5BO43169 146 aa16.55■□□□□ 0.24
VSX1-202ENST00000376709 IGKV1-16P04430 117 aa16.55■□□□□ 0.24
VSX1-202ENST00000376709 CD3EP07766 207 aa16.55■□□□□ 0.24
VSX1-202ENST00000376709 PMS2P11Q13670 270 aa16.55■□□□□ 0.24
VSX1-202ENST00000376709 LYPD2Q6UXB3 125 aa16.55■□□□□ 0.24
VSX1-202ENST00000376709 HINT2Q9BX68 163 aa16.55■□□□□ 0.24
VSX1-202ENST00000376709 A0A087WWC5 75 aa16.55■□□□□ 0.24
VSX1-202ENST00000376709 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.55■□□□□ 0.24
VSX1-202ENST00000376709 MPDU1O75352 247 aa16.55■□□□□ 0.24
VSX1-202ENST00000376709 FCN3O75636 299 aa16.55■□□□□ 0.24
VSX1-202ENST00000376709 AGAP20933 346 aa16.55■□□□□ 0.24
VSX1-202ENST00000376709 PSMB3P49720 205 aa16.55■□□□□ 0.24
VSX1-202ENST00000376709 MEF2BQ02080 365 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms