RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 CD69Q07108 199 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 RAB24Q969Q5 203 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 TNFRSF9Q07011 255 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 ATAD5Q96QE3 1844 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 CA11O75493 328 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 RNASE4P34096 147 aaKnown RBP12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 GATA4P43694 442 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 EFNB1P98172 346 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 COL5A1-AS1Q5SY13 56 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 LINC01587Q99440 93 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 IGLV1-36A0A0B4J1U3 117 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 STHQ8IWL8 128 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 EEF1AKMT3Q96AZ1 226 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 FOXH1O75593 365 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 CELA3BP08861 270 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 BSPH1Q075Z2 132 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 ICAM4Q14773 271 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 CLEC19AQ6UXS0 136 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 FOXA3P55318 350 aaPredicted RBP12.52□□□□□ -0.4
NOTCH4-201ENST00000375023 PKIAP61925 76 aa12.52□□□□□ -0.4
NOTCH4-201ENST00000375023 FAM159AQ6UWV7 190 aa12.52□□□□□ -0.4
NOTCH4-201ENST00000375023 LHFPL5Q8TAF8 219 aa12.52□□□□□ -0.4
NOTCH4-201ENST00000375023 ST6GALNAC6Q969X2 333 aa12.52□□□□□ -0.4
NOTCH4-201ENST00000375023 SPSB2Q99619 263 aa12.52□□□□□ -0.4
NOTCH4-201ENST00000375023 FAM74A7A6NL05 159 aa12.52□□□□□ -0.4
NOTCH4-201ENST00000375023 LYNX1G3V0Z9 82 aa12.52□□□□□ -0.4
NOTCH4-201ENST00000375023 LYNX1P0DP58 116 aa12.52□□□□□ -0.4
NOTCH4-201ENST00000375023 ERASQ7Z444 233 aa12.52□□□□□ -0.4
NOTCH4-201ENST00000375023 PPP1R32Q7Z5V6 425 aa12.52□□□□□ -0.4
NOTCH4-201ENST00000375023 TRBV20OR9-2A0A075B6H5 130 aa12.52□□□□□ -0.41
NOTCH4-201ENST00000375023 RBFOX2O43251 390 aaKnown RBP eCLIP12.52□□□□□ -0.41
NOTCH4-201ENST00000375023 LEPROTL1O95214 131 aa12.52□□□□□ -0.41
NOTCH4-201ENST00000375023 COLCA1Q6ZS62 124 aa12.52□□□□□ -0.41
NOTCH4-201ENST00000375023 KIR3DL3Q8N743 410 aa12.52□□□□□ -0.41
NOTCH4-201ENST00000375023 MTCL1Q9Y4B5 1905 aaKnown RBP12.52□□□□□ -0.41
NOTCH4-201ENST00000375023 LIPFP07098 398 aa12.52□□□□□ -0.41
NOTCH4-201ENST00000375023 CGB7P0DN87 165 aa12.52□□□□□ -0.41
NOTCH4-201ENST00000375023 TMEM170BQ5T4T1 132 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 LINC00470Q9BZP3 86 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 WNT10AQ9GZT5 417 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 HOXC8P31273 242 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 GPR183P32249 361 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 FAM216BQ8N7L0 139 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 C5orf66Q9H5L9 145 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 GATA2P23769 480 aaPredicted RBP12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 COTL1Q14019 142 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 GAGE10A6NGK3 116 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 SNRPD3P62318 126 aaKnown RBP12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 Q5BKY6 102 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 STPG3Q8N7X2 389 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 SP7Q8TDD2 431 aaPredicted RBP12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 NPIPB11E5RHQ5 1161 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 DRAM1Q8N682 238 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 LINC00527Q9UJ94 153 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 SYNGR3O43761 229 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 CEACAM4O75871 244 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 NAT1P18440 290 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 IL17RELQ6ZVW7 336 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 C1QL2Q7Z5L3 287 aa12.51□□□□□ -0.41
NOTCH4-201ENST00000375023 TRAV8-6A0A0B4J262 113 aa12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 PRB1P04280 392 aa12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 STAG3L2P0CL84 134 aa12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 PSG9Q00887 426 aa12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 NRIP2Q9BQI9 281 aa12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 MEF2BQ02080 365 aaPredicted RBP12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 OR51G1Q8NGK1 321 aa12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 PLP1P60201 277 aa12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 GFI1BQ5VTD9 330 aa12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 TCF19Q9Y242 345 aa12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 PDCD11Q14690 1871 aaKnown RBP12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 GCM2O75603 506 aaPredicted RBP12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 MALP21145 153 aa12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 HSPE1P61604 102 aaKnown RBP12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 PRR31Q5SQ13 230 aa12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 NABP2Q9BQ15 211 aa12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 COL18A1P39060 1754 aa12.5□□□□□ -0.41
NOTCH4-201ENST00000375023 COL4A1P02462 1669 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 FAM131CQ96AQ9 280 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 SLC25A38Q96DW6 304 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 G6PC2Q9NQR9 355 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 ZNF646O15015 1829 aaPredicted RBP12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 IGKV1D-42A0A075B6H8 117 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 CFDP00746 253 aaPredicted RBP12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 AQP3Q92482 292 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 PLSCR2Q9NRY7 297 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 GPR132Q9UNW8 380 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 QSER1Q2KHR3 1735 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 COX6CP09669 75 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 TFF3Q07654 80 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 SLC17A3O00476 420 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 C8orf88P0DMB2 117 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 OR9G1Q8NH87 305 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 TUBD1Q9UJT1 453 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 TCF20Q9UGU0 1960 aaKnown RBP12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 IGKV1D-43A0A0B4J1Z2 117 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 A0A1B0GV72 72 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 J3QKU1 62 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 PIN1P1O15428 100 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 WDR82Q6UXN9 313 aa12.49□□□□□ -0.41
NOTCH4-201ENST00000375023 TRAV24A0A0B4J272 114 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms