RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 RTL8BQ17RB0 113 aa14.9□□□□□ -0.02
CD40-201ENST00000372276 BSXQ3C1V8 233 aa14.9□□□□□ -0.02
CD40-201ENST00000372276 RPRMLQ8N4K4 120 aa14.9□□□□□ -0.02
CD40-201ENST00000372276 RHOVQ96L33 236 aa14.9□□□□□ -0.02
CD40-201ENST00000372276 NGBQ9NPG2 151 aa14.9□□□□□ -0.02
CD40-201ENST00000372276 RPUSD1Q9UJJ7 312 aaKnown RBP14.9□□□□□ -0.02
CD40-201ENST00000372276 MSRB2Q9Y3D2 182 aa14.9□□□□□ -0.02
CD40-201ENST00000372276 PRR14LQ5THK1 2151 aa14.89□□□□□ -0.03
CD40-201ENST00000372276 ELOA3CA0A087WX78 387 aaPredicted RBP14.89□□□□□ -0.03
CD40-201ENST00000372276 BMP5P22003 454 aa14.89□□□□□ -0.03
CD40-201ENST00000372276 ERVFRD-1P60508 538 aa14.89□□□□□ -0.03
CD40-201ENST00000372276 TLE1Q04724 770 aa14.89□□□□□ -0.03
CD40-201ENST00000372276 SSX9Q7RTT3 188 aa14.89□□□□□ -0.03
CD40-201ENST00000372276 OR4F5Q8NH21 305 aa14.89□□□□□ -0.03
CD40-201ENST00000372276 OR5B12Q96R08 314 aa14.89□□□□□ -0.03
CD40-201ENST00000372276 OR4F4Q96R69 305 aa14.89□□□□□ -0.03
CD40-201ENST00000372276 TMEM204Q9BSN7 226 aa14.89□□□□□ -0.03
CD40-201ENST00000372276 HCFC1P51610 2035 aa14.89□□□□□ -0.03
CD40-201ENST00000372276 SAA2-SAA4A0A096LPE2 208 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 PRSS46E5RG02 174 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 CXCL1P09341 107 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 SAA2P0DJI9 122 aaPredicted RBP14.88□□□□□ -0.03
CD40-201ENST00000372276 SPRNQ5BIV9 151 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 TREML4Q6UXN2 200 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 SLC25A48Q6ZT89 311 aaKnown RBP14.88□□□□□ -0.03
CD40-201ENST00000372276 DOLPP1Q86YN1 238 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 TGIF2LYQ8IUE0 185 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 DIDO1Q9BTC0 2240 aaKnown RBP14.88□□□□□ -0.03
CD40-201ENST00000372276 TANC2Q9HCD6 1990 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 A0A1W2PPE3 182 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 C17orf100A8MU93 164 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 MT-CO2P00403 227 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 CD99P14209 185 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 NPY1RP25929 384 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 CDX1P47902 265 aaPredicted RBP14.88□□□□□ -0.03
CD40-201ENST00000372276 LINC00205P59089 165 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 HNF4GQ14541 408 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 OR4A47Q6IF82 309 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 LYG1Q8N1E2 194 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 PARLQ9H300 379 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 CHODLQ9H9P2 273 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 JKAMPQ9P055 326 aa14.88□□□□□ -0.03
CD40-201ENST00000372276 DOCK11Q5JSL3 2073 aa14.87□□□□□ -0.03
CD40-201ENST00000372276 DSCAML1Q8TD84 2053 aa14.87□□□□□ -0.03
CD40-201ENST00000372276 TGIF2-C20orf24A0A0A6YYL0 155 aa14.87□□□□□ -0.03
CD40-201ENST00000372276 SLC31A2O15432 143 aa14.87□□□□□ -0.03
CD40-201ENST00000372276 CXorf1O96002 111 aa14.87□□□□□ -0.03
CD40-201ENST00000372276 ADIRFQ15847 76 aa14.87□□□□□ -0.03
CD40-201ENST00000372276 SPINK9Q5DT21 86 aa14.87□□□□□ -0.03
CD40-201ENST00000372276 FAM71F2Q6NXP2 309 aa14.87□□□□□ -0.03
CD40-201ENST00000372276 Q8N7P7 452 aa14.87□□□□□ -0.03
CD40-201ENST00000372276 SLC24A4Q8NFF2 622 aa14.87□□□□□ -0.03
CD40-201ENST00000372276 CCL13Q99616 98 aa14.87□□□□□ -0.03
CD40-201ENST00000372276 SSX3Q99909 188 aa14.87□□□□□ -0.03
CD40-201ENST00000372276 PYGO2Q9BRQ0 406 aa14.87□□□□□ -0.03
CD40-201ENST00000372276 SSUH2Q9Y2M2 353 aa14.87□□□□□ -0.03
CD40-201ENST00000372276 URGCP-MRPS24S4R325 110 aa14.87□□□□□ -0.03
CD40-201ENST00000372276 SVILO95425 2214 aa14.86□□□□□ -0.03
CD40-201ENST00000372276 A0A0G2JNJ9 132 aa14.86□□□□□ -0.03
CD40-201ENST00000372276 C11orf94C9JXX5 98 aa14.86□□□□□ -0.03
CD40-201ENST00000372276 H7BYZ3 331 aa14.86□□□□□ -0.03
CD40-201ENST00000372276 PPP1R2P9O14990 202 aa14.86□□□□□ -0.03
CD40-201ENST00000372276 PAGE4O60829 102 aa14.86□□□□□ -0.03
CD40-201ENST00000372276 IL6RP08887 468 aaPredicted RBP14.86□□□□□ -0.03
CD40-201ENST00000372276 TDGF1P3P51864 188 aa14.86□□□□□ -0.03
CD40-201ENST00000372276 RPL23P62829 140 aaKnown RBP14.86□□□□□ -0.03
CD40-201ENST00000372276 ZNF343Q6P1L6 599 aa14.86□□□□□ -0.03
CD40-201ENST00000372276 TEPPQ6URK8 271 aa14.86□□□□□ -0.03
CD40-201ENST00000372276 C8orf31Q8N9H6 132 aa14.86□□□□□ -0.03
CD40-201ENST00000372276 ZNF383Q8NA42 475 aa14.86□□□□□ -0.03
CD40-201ENST00000372276 DOK5Q9P104 306 aa14.86□□□□□ -0.03
CD40-201ENST00000372276 Q9UFV3 132 aa14.86□□□□□ -0.03
CD40-201ENST00000372276 ZNF835Q9Y2P0 537 aa14.86□□□□□ -0.03
CD40-201ENST00000372276 LSM4Q9Y4Z0 139 aaKnown RBP14.86□□□□□ -0.03
CD40-201ENST00000372276 CEP295Q9C0D2 2601 aa14.86□□□□□ -0.03
CD40-201ENST00000372276 PCP4L1A6NKN8 68 aa14.85□□□□□ -0.03
CD40-201ENST00000372276 RRHO14718 337 aa14.85□□□□□ -0.03
CD40-201ENST00000372276 GYPAP02724 150 aa14.85□□□□□ -0.03
CD40-201ENST00000372276 SRP14P37108 136 aaKnown RBP14.85□□□□□ -0.03
CD40-201ENST00000372276 RPL29P47914 159 aaKnown RBP14.85□□□□□ -0.03
CD40-201ENST00000372276 RBPJQ06330 500 aa14.85□□□□□ -0.03
CD40-201ENST00000372276 OR5B3Q8NH48 314 aa14.85□□□□□ -0.03
CD40-201ENST00000372276 OSR1Q8TAX0 266 aaPredicted RBP14.85□□□□□ -0.03
CD40-201ENST00000372276 RPUSD4Q96CM3 377 aaKnown RBP14.85□□□□□ -0.03
CD40-201ENST00000372276 PLPPR2Q96GM1 343 aa14.85□□□□□ -0.03
CD40-201ENST00000372276 SRD5A3Q9H8P0 318 aa14.85□□□□□ -0.03
CD40-201ENST00000372276 BET1LQ9NYM9 111 aa14.85□□□□□ -0.03
CD40-201ENST00000372276 PXMP4Q9Y6I8 212 aa14.85□□□□□ -0.03
CD40-201ENST00000372276 ARL2-SNX15V9GYD0 113 aa14.85□□□□□ -0.03
CD40-201ENST00000372276 DSCAMO60469 2012 aa14.85□□□□□ -0.03
CD40-201ENST00000372276 UPK2O00526 184 aa14.84□□□□□ -0.03
CD40-201ENST00000372276 TMPRSS2O15393 492 aa14.84□□□□□ -0.03
CD40-201ENST00000372276 APOA2P02652 100 aa14.84□□□□□ -0.03
CD40-201ENST00000372276 OR4A8P0C604 315 aa14.84□□□□□ -0.03
CD40-201ENST00000372276 STAG3L2P0CL84 134 aa14.84□□□□□ -0.03
CD40-201ENST00000372276 STAG3L3P0CL85 134 aa14.84□□□□□ -0.03
CD40-201ENST00000372276 S100A2P29034 98 aa14.84□□□□□ -0.03
CD40-201ENST00000372276 RHOBP62745 196 aa14.84□□□□□ -0.03
CD40-201ENST00000372276 SSX2Q16385 188 aa14.84□□□□□ -0.03
CD40-201ENST00000372276 DEFB108BQ8NET1 73 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms