RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 RFPL3SP0C7P2 107 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 CD81P60033 236 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 Q5BKY6 102 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 ABCA3Q99758 1704 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 IGHV3OR16-13A0A075B7E8 117 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 LOC102723996A0A087X1L8 192 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 IGHV3-74A0A0B4J1X5 117 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 AWAT1Q58HT5 328 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 LDLRAD2Q5SZI1 272 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 C12orf54Q6X4T0 127 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 NUDT10Q8NFP7 164 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 NEU1Q99519 415 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 KLK13Q9UKR3 277 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 LINC00312Q9Y6C7 94 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 CHCHD2Q9Y6H1 151 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-203ENST00000361654 TNFRSF9Q07011 255 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 LINC00518Q8N0U6 118 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 SGMS2Q8NHU3 365 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 FUT9Q9Y231 359 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 CASP8AP2Q9UKL3 1982 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 ARFGEF1Q9Y6D6 1849 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 H3BRM9 83 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 LILRA1O75019 489 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 TDGF1P13385 188 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 RCC1P18754 421 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-203ENST00000361654 GPR183P32249 361 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 NANOS3P60323 173 aaKnown RBP9.31□□□□□ -0.92
CLIP1-203ENST00000361654 FBLIM1Q8WUP2 373 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 IGHMP01871 453 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 CELA3AP09093 270 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 EFNB2P52799 333 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 C1orf100Q5SVJ3 147 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 TAF15Q92804 592 aaKnown RBP eCLIP9.31□□□□□ -0.92
CLIP1-203ENST00000361654 GPR146Q96CH1 333 aa9.31□□□□□ -0.92
CLIP1-203ENST00000361654 INTS1Q8N201 2190 aaKnown RBP9.31□□□□□ -0.92
CLIP1-203ENST00000361654 C7orf66A4D0T2 115 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 TMEM167AQ8TBQ9 72 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 AQP3Q92482 292 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 H3BQ15 152 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 H7C2G1 150 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 GREM1O60565 184 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 HLA-DQA1P01909 254 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 CA7P43166 264 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 CLEC19AQ6UXS0 136 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 WDYHV1Q96HA8 205 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 ZG16O60844 167 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 JOSD1Q15040 202 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-203ENST00000361654 PEAR1Q5VY43 1037 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-203ENST00000361654 CBLN2Q8IUK8 224 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 TMEM183AQ8IXX5 376 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 C9orf106Q8NAJ2 232 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 FAM206AQ9NX38 181 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 TRBV5-5A0A0J9YX44 114 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 KBTBD11-OT1A0A1B0GTJ5 212 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 NDUFB4O95168 129 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 WNT2P09544 360 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 MALP21145 153 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 MBNL2Q5VZF2 373 aaKnown RBP9.3□□□□□ -0.92
CLIP1-203ENST00000361654 FAM216BQ8N7L0 139 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 CTHRC1Q96CG8 243 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 SDF2L1Q9HCN8 221 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 ZNF638Q14966 1978 aaKnown RBP9.3□□□□□ -0.92
CLIP1-203ENST00000361654 ZDBF2Q9HCK1 2354 aa9.3□□□□□ -0.92
CLIP1-203ENST00000361654 IGHV3-11P01762 117 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 LEPP41159 167 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 EFNA4P52798 201 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 LBHQ53QV2 105 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-203ENST00000361654 POC1AQ8NBT0 407 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 AQP10Q96PS8 301 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 ATAD5Q96QE3 1844 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 LIMS1P48059 325 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 GOLT1AQ6ZVE7 132 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 B4DSR2 109 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 IL18BPO95998 194 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 SPSB4Q96A44 273 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 PGLYRP4Q96LB8 373 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 IMMP1LQ96LU5 166 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 SCN1AP35498 2009 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 IGHV3-49A0A0A0MS15 119 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 TMEM250H0YL14 139 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 APCDD1LQ8NCL9 501 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 Q96M66 194 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 NABP2Q9BQ15 211 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 AURKAIP1Q9NWT8 199 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-203ENST00000361654 RNF114Q9Y508 228 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 CEP290O15078 2479 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 SCN3AQ9NY46 2000 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 NBR2O15453 112 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 AMY1AP04745 511 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 IL6RP08887 468 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-203ENST00000361654 IGHV1-2P23083 117 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 KCNS1Q96KK3 526 aa9.29□□□□□ -0.92
CLIP1-203ENST00000361654 COL18A1P39060 1754 aa9.28□□□□□ -0.92
CLIP1-203ENST00000361654 TRBV20OR9-2A0A075B6H5 130 aa9.28□□□□□ -0.92
CLIP1-203ENST00000361654 GNLYP22749 145 aa9.28□□□□□ -0.92
CLIP1-203ENST00000361654 FAM3BP58499 235 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-203ENST00000361654 SELENOHQ8IZQ5 122 aaKnown RBP9.28□□□□□ -0.92
CLIP1-203ENST00000361654 SDHCQ99643 169 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-203ENST00000361654 EIF4EBP2Q13542 120 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-203ENST00000361654 CYP2G1PQ6ZSU1 146 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms