RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 STPG2Q8N412 459 aa2.3□□□□□ -2.04
LTN1-201ENST00000361371 CFHR4Q92496 578 aa2.3□□□□□ -2.04
LTN1-201ENST00000361371 DUX5Q96PT3 197 aa2.3□□□□□ -2.04
LTN1-201ENST00000361371 RSG1Q9BU20 258 aa2.3□□□□□ -2.04
LTN1-201ENST00000361371 MS4A7Q9GZW8 240 aaPredicted RBP2.3□□□□□ -2.04
LTN1-201ENST00000361371 BARX1Q9HBU1 254 aaPredicted RBP2.3□□□□□ -2.04
LTN1-201ENST00000361371 SESN1Q9Y6P5 492 aa2.3□□□□□ -2.04
LTN1-201ENST00000361371 TEX15Q9BXT5 2789 aa2.3□□□□□ -2.04
LTN1-201ENST00000361371 C15orf62A8K5M9 175 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 RAB29O14966 203 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 BCL2L11O43521 198 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 LYL1P12980 280 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 TNFRSF9Q07011 255 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 THOC7Q6I9Y2 204 aaKnown RBP2.29□□□□□ -2.04
LTN1-201ENST00000361371 AQP10Q96PS8 301 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 GAL3ST2Q9H3Q3 398 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 FAM96BQ9Y3D0 163 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 OTOGQ6ZRI0 2925 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 IGKV1OR2-108A0A075B7D4 117 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 IGHV1-3A0A0C4DH29 117 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 LY6LH3BQJ8 138 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 COX6B1P14854 86 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 PRTN3P24158 256 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 ATP6V0CP27449 155 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 OR5AN1Q8NGI8 311 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 PIFOQ8TCI5 191 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 TIMD4Q96H15 378 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 SMR3AQ99954 134 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 NCOR1P1Q9H4R4 102 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 FNDC4Q9H6D8 234 aaPredicted RBP2.29□□□□□ -2.04
LTN1-201ENST00000361371 ZNF430Q9H8G1 570 aaPredicted RBP2.29□□□□□ -2.04
LTN1-201ENST00000361371 ZC4H2Q9NQZ6 224 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 DMRT1Q9Y5R6 373 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 BUB1B-PAK6H3BSN5 160 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 UBE2KP61086 200 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 SRSF2Q01130 221 aaKnown RBP2.29□□□□□ -2.04
LTN1-201ENST00000361371 PSG5Q15238 335 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 CLEC12BQ2HXU8 276 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 ESCO2Q56NI9 601 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 ZNF833PQ6ZTB9 187 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 TMEM219Q86XT9 240 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 BCL6BQ8N143 479 aaPredicted RBP2.29□□□□□ -2.04
LTN1-201ENST00000361371 HARBI1Q96MB7 349 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 CCL19Q99731 98 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 PLEKHA2Q9HB19 425 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 SELENOKQ9Y6D0 94 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 PRRC2AP48634 2157 aaKnown RBP2.29□□□□□ -2.04
LTN1-201ENST00000361371 HEATR1Q9H583 2144 aaKnown RBP2.29□□□□□ -2.04
LTN1-201ENST00000361371 A0A087X0M5 115 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 CENPVL3A0A0U1RRI6 287 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 A0A1B0GX30 115 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 CEBPZOSA8MTT3 80 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 VWC2LB2RUY7 222 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 VENTXO95231 258 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 HPRT1P00492 218 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 CA2P00918 260 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 IFNA17P01571 189 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 LIPFP07098 398 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 FBP1P09467 338 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 DYNLT3P51808 116 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 TUSC1Q2TAM9 212 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 H2BFWTQ7Z2G1 175 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 SLC51BQ86UW2 128 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 OR10X1Q8NGY0 326 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 SLC25A32Q9H2D1 315 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 PSENENQ9NZ42 101 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 HSPB7Q9UBY9 170 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 PDZD2O15018 2839 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 A0A0U1RQK1 487 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 TOR1AO14656 332 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 SNRNP70P08621 437 aaKnown RBP2.29□□□□□ -2.04
LTN1-201ENST00000361371 ZNF726P1Q15940 193 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 FAM168AQ92567 244 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 EAF1Q96JC9 268 aaPredicted RBP2.29□□□□□ -2.04
LTN1-201ENST00000361371 HSD17B10Q99714 261 aaKnown RBP2.29□□□□□ -2.04
LTN1-201ENST00000361371 SPOCK3Q9BQ16 436 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 CLEC7AQ9BXN2 247 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 TNFRSF19Q9NS68 423 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 IGHV3OR16-8A0A075B7F1 116 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 TRAV40A0A0B4J280 105 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 IGHV3-35A0A0C4DH35 117 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 UPK2O00526 184 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 OR2F1Q13607 317 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 HABP2Q14520 560 aaPredicted RBP2.29□□□□□ -2.04
LTN1-201ENST00000361371 ZNF66Q6ZN08 573 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 SSX8Q7RTT4 187 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 C8orf46Q8TAG6 207 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 LYRM2Q9NU23 88 aaPredicted RBP2.29□□□□□ -2.04
LTN1-201ENST00000361371 LIN7CQ9NUP9 197 aaKnown RBP2.29□□□□□ -2.04
LTN1-201ENST00000361371 MIOXQ9UGB7 285 aa2.29□□□□□ -2.04
LTN1-201ENST00000361371 ODF3BA8MYP8 253 aa2.28□□□□□ -2.04
LTN1-201ENST00000361371 SHOXO15266 292 aa2.28□□□□□ -2.04
LTN1-201ENST00000361371 ECI1P42126 302 aa2.28□□□□□ -2.04
LTN1-201ENST00000361371 TMEM177Q53S58 311 aa2.28□□□□□ -2.04
LTN1-201ENST00000361371 MORN5Q5VZ52 161 aa2.28□□□□□ -2.04
LTN1-201ENST00000361371 C10orf99Q6UWK7 81 aa2.28□□□□□ -2.04
LTN1-201ENST00000361371 TMEM14EPQ6UXP3 125 aa2.28□□□□□ -2.04
LTN1-201ENST00000361371 LCNL1Q6ZST4 164 aa2.28□□□□□ -2.04
LTN1-201ENST00000361371 THNSL2Q86YJ6 484 aa2.28□□□□□ -2.04
LTN1-201ENST00000361371 IL22RA2Q969J5 263 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms