RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 DIRC2Q96SL1 478 aa16.45■□□□□ 0.22
CHD1L-201ENST00000361293 SPTA1P02549 2419 aa16.45■□□□□ 0.22
CHD1L-201ENST00000361293 SHISA9B4DS77 424 aa16.45■□□□□ 0.22
CHD1L-201ENST00000361293 PDLIM3Q53GG5 364 aaPredicted RBP16.45■□□□□ 0.22
CHD1L-201ENST00000361293 GCSAMLQ5JQS6 135 aa16.45■□□□□ 0.22
CHD1L-201ENST00000361293 SLC25A48Q6ZT89 311 aaKnown RBP16.45■□□□□ 0.22
CHD1L-201ENST00000361293 GATAD1Q8WUU5 269 aa16.45■□□□□ 0.22
CHD1L-201ENST00000361293 VAX2Q9UIW0 290 aa16.45■□□□□ 0.22
CHD1L-201ENST00000361293 TNCP24821 2201 aa16.45■□□□□ 0.22
CHD1L-201ENST00000361293 hADV38S2A0JD32 116 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 NKX6-3A6NJ46 265 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 C15orf61A6NNL5 157 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 PRSS46E5RG02 174 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 TMEM178BH3BS89 294 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 IGKV1-16P04430 117 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 RNF212Q495C1 297 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 WDR83OSQ9Y284 106 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 KLF2Q9Y5W3 355 aaPredicted RBP16.44■□□□□ 0.22
CHD1L-201ENST00000361293 LINC00312Q9Y6C7 94 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 TRAV38-1A0A0B4J264 116 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 CTXND1A0A1B0GTU2 59 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 CT45A6P0DMU7 189 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 CT45A5P0DMU8 189 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 CT45A7P0DMV0 189 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 RPL31P62899 125 aaKnown RBP16.44■□□□□ 0.22
CHD1L-201ENST00000361293 ZNF343Q6P1L6 599 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 LYPD2Q6UXB3 125 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 ZNF709Q8N972 641 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 RAB24Q969Q5 203 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 ARFGEF3Q5TH69 2177 aa16.44■□□□□ 0.22
CHD1L-201ENST00000361293 SMCO3A2RU48 225 aa16.43■□□□□ 0.22
CHD1L-201ENST00000361293 E7EQL1 145 aa16.43■□□□□ 0.22
CHD1L-201ENST00000361293 HOXA1P49639 335 aaPredicted RBP16.43■□□□□ 0.22
CHD1L-201ENST00000361293 CD81P60033 236 aa16.43■□□□□ 0.22
CHD1L-201ENST00000361293 SLC35E3Q7Z769 313 aa16.43■□□□□ 0.22
CHD1L-201ENST00000361293 RNASE6Q93091 150 aaKnown RBP16.43■□□□□ 0.22
CHD1L-201ENST00000361293 BIN3Q9NQY0 253 aa16.43■□□□□ 0.22
CHD1L-201ENST00000361293 RAB5BP61020 215 aa16.43■□□□□ 0.22
CHD1L-201ENST00000361293 TMEM14BQ9NUH8 114 aa16.43■□□□□ 0.22
CHD1L-201ENST00000361293 PPIAL4EA0A075B759 164 aa16.42■□□□□ 0.22
CHD1L-201ENST00000361293 C1orf196B1AJZ1 125 aa16.42■□□□□ 0.22
CHD1L-201ENST00000361293 PPIAL4DF5H284 164 aa16.42■□□□□ 0.22
CHD1L-201ENST00000361293 PPIAL4FP0DN26 164 aa16.42■□□□□ 0.22
CHD1L-201ENST00000361293 AGAP20933 346 aa16.42■□□□□ 0.22
CHD1L-201ENST00000361293 RPL35P42766 123 aaKnown RBP16.42■□□□□ 0.22
CHD1L-201ENST00000361293 TREML4Q6UXN2 200 aa16.42■□□□□ 0.22
CHD1L-201ENST00000361293 TMEM106BQ9NUM4 274 aa16.42■□□□□ 0.22
CHD1L-201ENST00000361293 PPIAL4AQ9Y536 164 aa16.42■□□□□ 0.22
CHD1L-201ENST00000361293 TRGV8A0A0C4DH27 118 aa16.42■□□□□ 0.22
CHD1L-201ENST00000361293 SRRM4A7MD48 611 aaKnown RBP16.42■□□□□ 0.22
CHD1L-201ENST00000361293 MBP02144 154 aa16.42■□□□□ 0.22
CHD1L-201ENST00000361293 AKR1D1P51857 326 aa16.42■□□□□ 0.22
CHD1L-201ENST00000361293 URGCP-MRPS24S4R325 110 aa16.42■□□□□ 0.22
CHD1L-201ENST00000361293 P2RX4Q99571 388 aa16.41■□□□□ 0.22
CHD1L-201ENST00000361293 MS4A5Q9H3V2 200 aa16.41■□□□□ 0.22
CHD1L-201ENST00000361293 FOXA2Q9Y261 457 aaPredicted RBP16.41■□□□□ 0.22
CHD1L-201ENST00000361293 A0A087WWC5 75 aa16.41■□□□□ 0.22
CHD1L-201ENST00000361293 IFNA1P01562 189 aa16.41■□□□□ 0.22
CHD1L-201ENST00000361293 MEF2BQ02080 365 aaPredicted RBP16.41■□□□□ 0.22
CHD1L-201ENST00000361293 RBPJQ06330 500 aa16.41■□□□□ 0.22
CHD1L-201ENST00000361293 TMEM200BQ69YZ2 307 aa16.41■□□□□ 0.22
CHD1L-201ENST00000361293 IQCF2Q8IXL9 164 aa16.41■□□□□ 0.22
CHD1L-201ENST00000361293 ADTRPQ96IZ2 230 aa16.41■□□□□ 0.22
CHD1L-201ENST00000361293 VKORC1Q9BQB6 163 aa16.41■□□□□ 0.22
CHD1L-201ENST00000361293 ACTR3CQ9C0K3 210 aaPredicted RBP16.41■□□□□ 0.22
CHD1L-201ENST00000361293 CTSZQ9UBR2 303 aa16.41■□□□□ 0.22
CHD1L-201ENST00000361293 MSRB2Q9Y3D2 182 aa16.41■□□□□ 0.22
CHD1L-201ENST00000361293 C17orf112F2Z3M2 114 aa16.4■□□□□ 0.22
CHD1L-201ENST00000361293 PMS2P11Q13670 270 aa16.4■□□□□ 0.22
CHD1L-201ENST00000361293 NCMAPQ5T1S8 102 aa16.4■□□□□ 0.22
CHD1L-201ENST00000361293 HEPN1Q6WQI6 88 aa16.4■□□□□ 0.22
CHD1L-201ENST00000361293 OR13D1Q8NGV5 346 aa16.4■□□□□ 0.22
CHD1L-201ENST00000361293 C1orf159Q96HA4 380 aa16.4■□□□□ 0.22
CHD1L-201ENST00000361293 OPN1MWP04001 364 aa16.4■□□□□ 0.22
CHD1L-201ENST00000361293 OPN1MW2P0DN77 364 aa16.4■□□□□ 0.22
CHD1L-201ENST00000361293 OPN1MW3P0DN78 364 aa16.4■□□□□ 0.22
CHD1L-201ENST00000361293 MAS1LP35410 378 aa16.4■□□□□ 0.22
CHD1L-201ENST00000361293 HSPE1P61604 102 aaKnown RBP16.4■□□□□ 0.22
CHD1L-201ENST00000361293 SNRPEP62304 92 aaKnown RBP16.4■□□□□ 0.22
CHD1L-201ENST00000361293 RPP30P78346 268 aaKnown RBP16.4■□□□□ 0.22
CHD1L-201ENST00000361293 WDR25Q64LD2 544 aaPredicted RBP16.4■□□□□ 0.22
CHD1L-201ENST00000361293 Q8WTZ3 238 aa16.4■□□□□ 0.22
CHD1L-201ENST00000361293 H1FXQ92522 213 aaKnown RBP16.4■□□□□ 0.22
CHD1L-201ENST00000361293 ZNF714Q96N38 554 aa16.4■□□□□ 0.22
CHD1L-201ENST00000361293 MGST2Q99735 147 aa16.4■□□□□ 0.22
CHD1L-201ENST00000361293 TNFRSF13BO14836 293 aaPredicted RBP16.39■□□□□ 0.21
CHD1L-201ENST00000361293 PLAUP00749 431 aa16.39■□□□□ 0.21
CHD1L-201ENST00000361293 IFNA4P05014 189 aa16.39■□□□□ 0.21
CHD1L-201ENST00000361293 RBMS3Q6XE24 437 aaKnown RBP16.39■□□□□ 0.21
CHD1L-201ENST00000361293 LINC00518Q8N0U6 118 aa16.39■□□□□ 0.21
CHD1L-201ENST00000361293 C1orf87Q8N0U7 546 aa16.39■□□□□ 0.21
CHD1L-201ENST00000361293 HINT2Q9BX68 163 aa16.39■□□□□ 0.21
CHD1L-201ENST00000361293 GAL3ST2Q9H3Q3 398 aa16.39■□□□□ 0.21
CHD1L-201ENST00000361293 DYNLRB1Q9NP97 96 aa16.39■□□□□ 0.21
CHD1L-201ENST00000361293 SLC35D1Q9NTN3 355 aa16.39■□□□□ 0.21
CHD1L-201ENST00000361293 LY86O95711 162 aa16.39■□□□□ 0.21
CHD1L-201ENST00000361293 CXCL1P09341 107 aa16.39■□□□□ 0.21
CHD1L-201ENST00000361293 CDC34P49427 236 aaPredicted RBP16.39■□□□□ 0.21
CHD1L-201ENST00000361293 ELOBQ15370 118 aa16.39■□□□□ 0.21
CHD1L-201ENST00000361293 POU2AF1Q16633 256 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms