RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 SIGLECL1Q8N7X8 197 aa5.92□□□□□ -1.46
RAB5B-201ENST00000360299 SSMEM1Q8WWF3 244 aa5.92□□□□□ -1.46
RAB5B-201ENST00000360299 TAF15Q92804 592 aaKnown RBP eCLIP5.92□□□□□ -1.46
RAB5B-201ENST00000360299 GGACTQ9BVM4 153 aa5.92□□□□□ -1.46
RAB5B-201ENST00000360299 LINC00312Q9Y6C7 94 aa5.92□□□□□ -1.46
RAB5B-201ENST00000360299 CEACAM18A8MTB9 384 aa5.92□□□□□ -1.46
RAB5B-201ENST00000360299 PRR32B1ATL7 298 aa5.92□□□□□ -1.46
RAB5B-201ENST00000360299 CELA3BP08861 270 aa5.92□□□□□ -1.46
RAB5B-201ENST00000360299 KIR2DL2P43627 348 aaPredicted RBP5.92□□□□□ -1.46
RAB5B-201ENST00000360299 OR10G8Q8NGN5 311 aa5.92□□□□□ -1.46
RAB5B-201ENST00000360299 LYZL4Q96KX0 146 aa5.92□□□□□ -1.46
RAB5B-201ENST00000360299 LAMA1P25391 3075 aa5.92□□□□□ -1.46
RAB5B-201ENST00000360299 KBTBD11-OT1A0A1B0GTJ5 212 aa5.92□□□□□ -1.46
RAB5B-201ENST00000360299 MBD3L4A6NDZ8 208 aaPredicted RBP5.92□□□□□ -1.46
RAB5B-201ENST00000360299 MBD3L3A6NE82 208 aaPredicted RBP5.92□□□□□ -1.46
RAB5B-201ENST00000360299 MBD3L5A6NJ08 208 aaPredicted RBP5.92□□□□□ -1.46
RAB5B-201ENST00000360299 MMP7P09237 267 aaPredicted RBP5.92□□□□□ -1.46
RAB5B-201ENST00000360299 SMIM17P0DL12 118 aa5.92□□□□□ -1.46
RAB5B-201ENST00000360299 REG1BP48304 166 aa5.92□□□□□ -1.46
RAB5B-201ENST00000360299 B3GALT5-AS1P59052 145 aa5.92□□□□□ -1.46
RAB5B-201ENST00000360299 MBD3L2Q8NHZ7 208 aaPredicted RBP5.92□□□□□ -1.46
RAB5B-201ENST00000360299 P2RX4Q99571 388 aa5.92□□□□□ -1.46
RAB5B-201ENST00000360299 QTRT1Q9BXR0 403 aaKnown RBP5.92□□□□□ -1.46
RAB5B-201ENST00000360299 USF3Q68DE3 2245 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 RHBDL1O75783 438 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 LY6HO94772 140 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 NMBP08949 121 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 OTX1P32242 354 aaPredicted RBP5.91□□□□□ -1.46
RAB5B-201ENST00000360299 FGF8P55075 233 aaPredicted RBP5.91□□□□□ -1.46
RAB5B-201ENST00000360299 ERVS71-1P61550 626 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 NSUN5P1Q3KNT7 163 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 NEUROG1Q92886 237 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 FAM210BQ96KR6 192 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 NPAS1Q99742 590 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 SLX1AQ9BQ83 275 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 PSMG3Q9BT73 122 aaPredicted RBP5.91□□□□□ -1.46
RAB5B-201ENST00000360299 DOK5Q9P104 306 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 METTL1Q9UBP6 276 aaKnown RBP5.91□□□□□ -1.46
RAB5B-201ENST00000360299 TCF19Q9Y242 345 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 WDFY3Q8IZQ1 3526 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 SPTBN4Q9H254 2564 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 TRBV6-7A0A0A0MS04 114 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 B4DSR2 109 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 FREM3P0C091 2139 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 DLK1P80370 383 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 MBNL2Q5VZF2 373 aaKnown RBP5.91□□□□□ -1.46
RAB5B-201ENST00000360299 OR2T10Q8NGZ9 312 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 MRPL30Q8TCC3 161 aaKnown RBP5.91□□□□□ -1.46
RAB5B-201ENST00000360299 TRAPPC1Q9Y5R8 145 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 IGSF23A1L1A6 192 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 YPEL1O60688 119 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 HSPB1P04792 205 aaKnown RBP5.91□□□□□ -1.46
RAB5B-201ENST00000360299 BCL2P10415 239 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 RAB9AP51151 201 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 RPEL1Q2QD12 228 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 IL17RELQ6ZVW7 336 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 ZNRF1Q8ND25 227 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 BLNKQ8WV28 456 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 YPEL2Q96QA6 119 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 HIGD1AQ9Y241 93 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 PXMP4Q9Y6I8 212 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 HELTA6NFD8 242 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 DNASE2O00115 360 aaPredicted RBP5.91□□□□□ -1.46
RAB5B-201ENST00000360299 KLK2P20151 261 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 DEFB113Q30KQ7 82 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 ZNF430Q9H8G1 570 aaPredicted RBP5.91□□□□□ -1.46
RAB5B-201ENST00000360299 ZNF319Q9P2F9 582 aa5.91□□□□□ -1.46
RAB5B-201ENST00000360299 SERTM2A0A1B0GWG4 89 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 WNT9BO14905 357 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 PAGE4O60829 102 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 HSBP1O75506 76 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 HIST1H1EP10412 219 aaKnown RBP5.9□□□□□ -1.46
RAB5B-201ENST00000360299 GRNP28799 593 aaKnown RBP5.9□□□□□ -1.46
RAB5B-201ENST00000360299 TPPP2P59282 170 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 PAFAH1B2P68402 229 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 DEFA6Q01524 100 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 CLCF1Q9UBD9 225 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 YTHDF2Q9Y5A9 579 aaKnown RBP5.9□□□□□ -1.46
RAB5B-201ENST00000360299 S1PR2O95136 353 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 PLAUP00749 431 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 SSTR5P35346 364 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 STPG3Q8N7X2 389 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 OR4C12Q96R67 309 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 DPM3Q9P2X0 92 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 TMEM56-RWDD3S4R434 201 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 RBFOX2O43251 390 aaKnown RBP eCLIP5.9□□□□□ -1.46
RAB5B-201ENST00000360299 OR10J1P30954 320 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 ZNF672Q499Z4 452 aaPredicted RBP5.9□□□□□ -1.46
RAB5B-201ENST00000360299 ZNF788Q6ZQV5 615 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 PAQR4Q8N4S7 273 aaPredicted RBP5.9□□□□□ -1.46
RAB5B-201ENST00000360299 OR4A5Q8NH83 315 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 TP53RKQ96S44 253 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 PAXXQ9BUH6 204 aa5.9□□□□□ -1.46
RAB5B-201ENST00000360299 MRPL37Q9BZE1 423 aaKnown RBP5.9□□□□□ -1.46
RAB5B-201ENST00000360299 PKDREJQ9NTG1 2253 aa5.9□□□□□ -1.47
RAB5B-201ENST00000360299 TRAV40A0A0B4J280 105 aa5.9□□□□□ -1.47
RAB5B-201ENST00000360299 IGHV1-18A0A0C4DH31 117 aa5.9□□□□□ -1.47
RAB5B-201ENST00000360299 A0A1W2PS18 150 aa5.9□□□□□ -1.47
RAB5B-201ENST00000360299 LDLRAD4O15165 306 aa5.9□□□□□ -1.47
RAB5B-201ENST00000360299 MFAP4P55083 255 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms